| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is glmM
Identifier: 28572318
GI number: 28572318
Start: 179181
End: 180542
Strand: Direct
Name: glmM
Synonym: TW155
Alternate gene names: 28572318
Gene position: 179181-180542 (Clockwise)
Preceding gene: 28572317
Following gene: 28572320
Centisome position: 19.35
GC content: 49.12
Gene sequence:
>1362_bases TTGGCCAGGCTGTTTGGAACAGATGGCATACGGGCGCTGGCAAATGGTGATTTGCTCACCCCAGAACTGGCCATGGCCGT CGCCCGCGCCGCCGCCGTCGTCTTTACCCATGGCCGCGTTGCAAAAAGAAGGCAGGTCTTAGGCAAGCGACCGGTAGCTA TTGTTGCGCGCGATCCCAGGATATCGGGTGATTTTTTGGTAGCGGCAATTTCCGCGGGTCTTGCCAGCTCTGGGGTAGAT GTTCTCGACGCTGGGGTTATTCCAACTCCAGCCGTAGCCTTTTTGGTAAAAAACGCAAATGCTGACTTTGGATTTATGAT ATCCGCATCTCACAACCCGGGTTACGACAATGGTGTAAAGATATTTGCCCATGGTGGGGTGAAACTGCCCGATGTAGTTG AAGACCGCATTGAATATTTCCTGGATAAACAGAAACTGTCACCGATTGGTTCAAAGGTTGGCCGGATAACACGTTTTGTT GATGCAGAGGATCGATACCAAATGCATTTACTGTCAACCTTGTTCACCAGAATAGACGGCGTGAAAGTAGTAATAGATTG TGCCAATGGCGCAGCGTCTGGTGTTTCACCAGATGTATTTAAGTCTGCTGGTGCTGCGGTGAAGGTTATTTGCGCAGACC CGAACGGCGTTAACATAAACGATGGTGTTGGCTCGGCATACCCAGAAAGACTTAGGGCAGAAGTTATTCGTAACTCCGCC ACTCTCGGCCTTGCTTTTGACGGCGATGCTGATCGCTGCATCGCGGTTGATTCAAACGGCAACACGGTCGACGGGGATCA GATAATGGCAATTTTGGCCAGATCAATGCAACAGCGCGGCACACTACGGAATAAAACCCTCGTTACAACCATTATGAGCA ATATTGGCCTTGATCGCGCCATGAAAAAACTCGGTATCAACCTTAAAAGAACGCAGGTTGGCGATAGATACGTCATTGAG GCCATGACCCAAGGGGGATTCAATATTGGCGGGGAGCAAAGCGGCCATATAATCCTATCTGATTATTCAACCGCCGGTGA CGGCATTCTTGCGGGCCTGCATCTATGTGCGGAAATCATTCGAACCGGTAAAAGCTTGACGGATCTAGCTAGCATCATGG AGATTGTCCCGCAGGTCACGGCAAACATAGAAACAGATGATCCAACAACCCTGCTGAACAACAAAAAAATTCGCCATGAG ATATCACGCATTGAAAAATCTCTAAAGGGTAGAGTTGTAATTCGTCCAAGTGGCACAGAACCTCTTATCCGTATTATGGT CGAGGATTTAAATCCGGAGAAAGCGGAGCGCGCCTGCTCGCATTTAGCAGATTTTTTCAAACAGGAAATCCAGAAGAGCT AG
Upstream 100 bases:
>100_bases GTCTGCCGGTTTTCTAACCCGTGACAGTCGGGTGAAAGAGCGCAAAAAAGCCGGCCTGAAAAAGGCCCGCAAGGCACCTC AGTATTCGAAGCGTTAGATA
Downstream 100 bases:
>100_bases CTTCATTTCTGTAAAGTGTCATTTTATGTCTCGGATTTTTATACACAATAAAGTCTGCCGTATGTTTCACTGGCAAAATA TTTTCCGTGAAGTTTTTTCG
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MARLFGTDGIRALANGDLLTPELAMAVARAAAVVFTHGRVAKRRQVLGKRPVAIVARDPRISGDFLVAAISAGLASSGVD VLDAGVIPTPAVAFLVKNANADFGFMISASHNPGYDNGVKIFAHGGVKLPDVVEDRIEYFLDKQKLSPIGSKVGRITRFV DAEDRYQMHLLSTLFTRIDGVKVVIDCANGAASGVSPDVFKSAGAAVKVICADPNGVNINDGVGSAYPERLRAEVIRNSA TLGLAFDGDADRCIAVDSNGNTVDGDQIMAILARSMQQRGTLRNKTLVTTIMSNIGLDRAMKKLGINLKRTQVGDRYVIE AMTQGGFNIGGEQSGHIILSDYSTAGDGILAGLHLCAEIIRTGKSLTDLASIMEIVPQVTANIETDDPTTLLNNKKIRHE ISRIEKSLKGRVVIRPSGTEPLIRIMVEDLNPEKAERACSHLADFFKQEIQKS
Sequences:
>Translated_453_residues MARLFGTDGIRALANGDLLTPELAMAVARAAAVVFTHGRVAKRRQVLGKRPVAIVARDPRISGDFLVAAISAGLASSGVD VLDAGVIPTPAVAFLVKNANADFGFMISASHNPGYDNGVKIFAHGGVKLPDVVEDRIEYFLDKQKLSPIGSKVGRITRFV DAEDRYQMHLLSTLFTRIDGVKVVIDCANGAASGVSPDVFKSAGAAVKVICADPNGVNINDGVGSAYPERLRAEVIRNSA TLGLAFDGDADRCIAVDSNGNTVDGDQIMAILARSMQQRGTLRNKTLVTTIMSNIGLDRAMKKLGINLKRTQVGDRYVIE AMTQGGFNIGGEQSGHIILSDYSTAGDGILAGLHLCAEIIRTGKSLTDLASIMEIVPQVTANIETDDPTTLLNNKKIRHE ISRIEKSLKGRVVIRPSGTEPLIRIMVEDLNPEKAERACSHLADFFKQEIQKS >Mature_452_residues ARLFGTDGIRALANGDLLTPELAMAVARAAAVVFTHGRVAKRRQVLGKRPVAIVARDPRISGDFLVAAISAGLASSGVDV LDAGVIPTPAVAFLVKNANADFGFMISASHNPGYDNGVKIFAHGGVKLPDVVEDRIEYFLDKQKLSPIGSKVGRITRFVD AEDRYQMHLLSTLFTRIDGVKVVIDCANGAASGVSPDVFKSAGAAVKVICADPNGVNINDGVGSAYPERLRAEVIRNSAT LGLAFDGDADRCIAVDSNGNTVDGDQIMAILARSMQQRGTLRNKTLVTTIMSNIGLDRAMKKLGINLKRTQVGDRYVIEA MTQGGFNIGGEQSGHIILSDYSTAGDGILAGLHLCAEIIRTGKSLTDLASIMEIVPQVTANIETDDPTTLLNNKKIRHEI SRIEKSLKGRVVIRPSGTEPLIRIMVEDLNPEKAERACSHLADFFKQEIQKS
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=453, Percent_Identity=43.7086092715232, Blast_Score=327, Evalue=1e-90, Organism=Escherichia coli, GI1788361, Length=438, Percent_Identity=26.2557077625571, Blast_Score=112, Evalue=6e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_TROW8 (Q83NS5)
Other databases:
- EMBL: BX251410 - RefSeq: NP_789098.1 - ProteinModelPortal: Q83NS5 - SMR: Q83NS5 - STRING: Q83NS5 - GeneID: 1064450 - GenomeReviews: BX072543_GR - KEGG: tws:TW155 - eggNOG: COG1109 - HOGENOM: HBG644964 - OMA: VHDRYIE - PhylomeDB: Q83NS5 - ProtClustDB: PRK14318 - BioCyc: TWHI218496:TW0143-MONOMER - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 48455; Mature: 48324
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 110-110
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLFGTDGIRALANGDLLTPELAMAVARAAAVVFTHGRVAKRRQVLGKRPVAIVARDPR CCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHCCCCEEEEEECCC ISGDFLVAAISAGLASSGVDVLDAGVIPTPAVAFLVKNANADFGFMISASHNPGYDNGVK CCCHHHHHHHHHHHCCCCCHHHCCCCCCCCHHEEEEECCCCCEEEEEECCCCCCCCCCEE IFAHGGVKLPDVVEDRIEYFLDKQKLSPIGSKVGRITRFVDAEDRYQMHLLSTLFTRIDG EEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC VKVVIDCANGAASGVSPDVFKSAGAAVKVICADPNGVNINDGVGSAYPERLRAEVIRNSA EEEEEECCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCC TLGLAFDGDADRCIAVDSNGNTVDGDQIMAILARSMQQRGTLRNKTLVTTIMSNIGLDRA EEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHH MKKLGINLKRTQVGDRYVIEAMTQGGFNIGGEQSGHIILSDYSTAGDGILAGLHLCAEII HHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH RTGKSLTDLASIMEIVPQVTANIETDDPTTLLNNKKIRHEISRIEKSLKGRVVIRPSGTE HCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCEEEECCCCC PLIRIMVEDLNPEKAERACSHLADFFKQEIQKS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARLFGTDGIRALANGDLLTPELAMAVARAAAVVFTHGRVAKRRQVLGKRPVAIVARDPR CCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHCCCCEEEEEECCC ISGDFLVAAISAGLASSGVDVLDAGVIPTPAVAFLVKNANADFGFMISASHNPGYDNGVK CCCHHHHHHHHHHHCCCCCHHHCCCCCCCCHHEEEEECCCCCEEEEEECCCCCCCCCCEE IFAHGGVKLPDVVEDRIEYFLDKQKLSPIGSKVGRITRFVDAEDRYQMHLLSTLFTRIDG EEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC VKVVIDCANGAASGVSPDVFKSAGAAVKVICADPNGVNINDGVGSAYPERLRAEVIRNSA EEEEEECCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCC TLGLAFDGDADRCIAVDSNGNTVDGDQIMAILARSMQQRGTLRNKTLVTTIMSNIGLDRA EEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHH MKKLGINLKRTQVGDRYVIEAMTQGGFNIGGEQSGHIILSDYSTAGDGILAGLHLCAEII HHHHCCCEEEECCCCHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH RTGKSLTDLASIMEIVPQVTANIETDDPTTLLNNKKIRHEISRIEKSLKGRVVIRPSGTE HCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCEEEECCCCC PLIRIMVEDLNPEKAERACSHLADFFKQEIQKS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12606174