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The map label for this gene is 28572295

Identifier: 28572295

GI number: 28572295

Start: 138453

End: 140111

Strand: Reverse

Name: 28572295

Synonym: TW132

Alternate gene names: NA

Gene position: 140111-138453 (Counterclockwise)

Preceding gene: 28572310

Following gene: 28572284

Centisome position: 15.13

GC content: 46.47

Gene sequence:

>1659_bases
ATGATTGCCTATTGGGGCATGATATTTGGGGTTGTCGTTCTGGCAACCCTGCTGCGTTTTTACAACCTATCAGACCCAAA
AACTCTGATTTTTGACGAAACTTACTACGTCAAAGACGCTTACACTCTGTACAAAAACGGGTATGAATCCGAATGGCCAC
GAGATATGAAGCCCGAGGATATAGATAAGAGATTCGTATCCGGGGATACCGATTTTTTCACAAATGAACCGGAATTTCTA
GCTCATCCACATCTAGGTAAATACATTATTGGCGCAGGGATTGAGTTATTTGGAGTGAGAAGTCAATTCGGTTGGCGGAT
TGCGGTTGCCCTAATAGGGGTGCTCGGGGTCTTTATGACAGCTGTTATAGCCGCCAGGTTATTTGAGAGCACCCTCATAG
GGGGGATTGCGGGCTTTCTGTTTGCGATAGAAAACAATGCAATTGTAATGAGTCGGGTTGCCATACTCGACAATGTGCTG
ATGATAATTTCATTGATTGCGGTATGGTGCGTTTTGCTGGATCGACAATGGTACAGAAAAGCCATGTCAAAGTGGGTTCA
GAATCGAAGTAAGCACCTCAGCCAAGATGCAAAGGGCAATTACCTCGTCTCAGGGCCGCTCGTGTGGTGGCGACCATGGC
TTGCCCTTGCTGCTGTTTTGATGGGTATGGCTGCCTCTGTGAAATGGTCAGGTATTTTTTATTACTTCGGGATAATCCCG
TACATAACGGCAATTGACTGGACAACGCGCAAGCAGCTTGGTATCAAATATCGCTTTCAGGGAACCTTCTACCAGGTACT
TGTCTCGGGTATCAGTTCAGTTATCATTTCCGTGTTTGTCTACATCGCGCTATGGGCAAATTACTTCATTGTAGGTGGGT
GGGGCTCAAGCTGGGCAACCTATCCAGGAAATGGGTGGGCAGGACCGCTTGCATGGGTGCCAAAGATATTCCAGAGCTGG
GTGAATTTTCAGGTAACTATGTACAGATTTAACTCCACTCTTACAACCCCTCATATCTATGAAGCCCCAGTGTATACGTG
GCCTTTCCTTATTAGACCCACGAATATGTACTGGACAAAGATTGGTGATGATGTGCGGGTTATAATCGGCCTGCCAAACC
CCTTGCTTTGGTGGGCAGCCGTAGCTCTGTTCATCATTTTTGCACTAATCGCTATTTTTGCACCGAGTCGACGTGATTGG
CGTATGAATTTTATACTTATGACTCTCGCTGGTGGATACTTTCCTTGGTTTTTGTACGTTAACAGAACTATCTTTCATTT
CTATACCATTGTCTTTGAGCCGTTTATGATAATCATGATTGCTGCTGCAATCTACAAGATTCTGGAAATAAAAACCGAAA
ATAGGCTTTTGCCAACACCATGGGTGGGAACGCGACGATTTGAGTATGGATCCCGGGTGCTTGCGGCTCTGCGTGGAAGC
GGTAACCGTGTGCGCGAAGCGTGTTTTGTTATGCCAGCACGAATTGCCAGCCTGGATATTGCGCCTGTTATGCAAGCCCC
TCTTCTGCGGCTTATGTTGGTTGTAACATTCCTCCTGGCGGCAACCGTGTGTGGCTTCGTCATCCTACCGATCAATATGG
CATGGCCGGTGCACTATAAATATTGGGAAAGCCTGATGATTTTACCCAGCTGGAAGTAA

Upstream 100 bases:

>100_bases
GTATCCTATGAGATTTACACCATCGCCACTGAGCGCGACTTCGCGACTAACACCGGCTTGTGCATTCTGGCACAAGCTCC
TGAAAAGCTATAAAAGCAAC

Downstream 100 bases:

>100_bases
TGCATGCGTATTTGTCTTGCCTGCGGTAAGGCTATTTACCTGGAATGACACCTCTGGTCGCCAAAATTATAAAGAAGTAT
ATGTATTAGTTTCTGTTACA

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MIAYWGMIFGVVVLATLLRFYNLSDPKTLIFDETYYVKDAYTLYKNGYESEWPRDMKPEDIDKRFVSGDTDFFTNEPEFL
AHPHLGKYIIGAGIELFGVRSQFGWRIAVALIGVLGVFMTAVIAARLFESTLIGGIAGFLFAIENNAIVMSRVAILDNVL
MIISLIAVWCVLLDRQWYRKAMSKWVQNRSKHLSQDAKGNYLVSGPLVWWRPWLALAAVLMGMAASVKWSGIFYYFGIIP
YITAIDWTTRKQLGIKYRFQGTFYQVLVSGISSVIISVFVYIALWANYFIVGGWGSSWATYPGNGWAGPLAWVPKIFQSW
VNFQVTMYRFNSTLTTPHIYEAPVYTWPFLIRPTNMYWTKIGDDVRVIIGLPNPLLWWAAVALFIIFALIAIFAPSRRDW
RMNFILMTLAGGYFPWFLYVNRTIFHFYTIVFEPFMIIMIAAAIYKILEIKTENRLLPTPWVGTRRFEYGSRVLAALRGS
GNRVREACFVMPARIASLDIAPVMQAPLLRLMLVVTFLLAATVCGFVILPINMAWPVHYKYWESLMILPSWK

Sequences:

>Translated_552_residues
MIAYWGMIFGVVVLATLLRFYNLSDPKTLIFDETYYVKDAYTLYKNGYESEWPRDMKPEDIDKRFVSGDTDFFTNEPEFL
AHPHLGKYIIGAGIELFGVRSQFGWRIAVALIGVLGVFMTAVIAARLFESTLIGGIAGFLFAIENNAIVMSRVAILDNVL
MIISLIAVWCVLLDRQWYRKAMSKWVQNRSKHLSQDAKGNYLVSGPLVWWRPWLALAAVLMGMAASVKWSGIFYYFGIIP
YITAIDWTTRKQLGIKYRFQGTFYQVLVSGISSVIISVFVYIALWANYFIVGGWGSSWATYPGNGWAGPLAWVPKIFQSW
VNFQVTMYRFNSTLTTPHIYEAPVYTWPFLIRPTNMYWTKIGDDVRVIIGLPNPLLWWAAVALFIIFALIAIFAPSRRDW
RMNFILMTLAGGYFPWFLYVNRTIFHFYTIVFEPFMIIMIAAAIYKILEIKTENRLLPTPWVGTRRFEYGSRVLAALRGS
GNRVREACFVMPARIASLDIAPVMQAPLLRLMLVVTFLLAATVCGFVILPINMAWPVHYKYWESLMILPSWK
>Mature_552_residues
MIAYWGMIFGVVVLATLLRFYNLSDPKTLIFDETYYVKDAYTLYKNGYESEWPRDMKPEDIDKRFVSGDTDFFTNEPEFL
AHPHLGKYIIGAGIELFGVRSQFGWRIAVALIGVLGVFMTAVIAARLFESTLIGGIAGFLFAIENNAIVMSRVAILDNVL
MIISLIAVWCVLLDRQWYRKAMSKWVQNRSKHLSQDAKGNYLVSGPLVWWRPWLALAAVLMGMAASVKWSGIFYYFGIIP
YITAIDWTTRKQLGIKYRFQGTFYQVLVSGISSVIISVFVYIALWANYFIVGGWGSSWATYPGNGWAGPLAWVPKIFQSW
VNFQVTMYRFNSTLTTPHIYEAPVYTWPFLIRPTNMYWTKIGDDVRVIIGLPNPLLWWAAVALFIIFALIAIFAPSRRDW
RMNFILMTLAGGYFPWFLYVNRTIFHFYTIVFEPFMIIMIAAAIYKILEIKTENRLLPTPWVGTRRFEYGSRVLAALRGS
GNRVREACFVMPARIASLDIAPVMQAPLLRLMLVVTFLLAATVCGFVILPINMAWPVHYKYWESLMILPSWK

Specific function: Unknown

COG id: COG1928

COG function: function code O; Dolichyl-phosphate-mannose--protein O-mannosyl transferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 39 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003342 [H]

Pfam domain/function: PF02366 PMT [H]

EC number: NA

Molecular weight: Translated: 63366; Mature: 63366

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAYWGMIFGVVVLATLLRFYNLSDPKTLIFDETYYVKDAYTLYKNGYESEWPRDMKPED
CEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEEEEHHHHHHHHCCCCCCCCCCCCCCH
IDKRFVSGDTDFFTNEPEFLAHPHLGKYIIGAGIELFGVRSQFGWRIAVALIGVLGVFMT
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEHHHCCHHHHHHHHHHHHHHHH
AVIAARLFESTLIGGIAGFLFAIENNAIVMSRVAILDNVLMIISLIAVWCVLLDRQWYRK
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMSKWVQNRSKHLSQDAKGNYLVSGPLVWWRPWLALAAVLMGMAASVKWSGIFYYFGIIP
HHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YITAIDWTTRKQLGIKYRFQGTFYQVLVSGISSVIISVFVYIALWANYFIVGGWGSSWAT
HHHHCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCC
YPGNGWAGPLAWVPKIFQSWVNFQVTMYRFNSTLTTPHIYEAPVYTWPFLIRPTNMYWTK
CCCCCCCCHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEEECCCEECCEEEECCCEEEEE
IGDDVRVIIGLPNPLLWWAAVALFIIFALIAIFAPSRRDWRMNFILMTLAGGYFPWFLYV
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEHHCCHHHHHHHH
NRTIFHFYTIVFEPFMIIMIAAAIYKILEIKTENRLLPTPWVGTRRFEYGSRVLAALRGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
GNRVREACFVMPARIASLDIAPVMQAPLLRLMLVVTFLLAATVCGFVILPINMAWPVHYK
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHH
YWESLMILPSWK
HHCCEEECCCCC
>Mature Secondary Structure
MIAYWGMIFGVVVLATLLRFYNLSDPKTLIFDETYYVKDAYTLYKNGYESEWPRDMKPED
CEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEEEEHHHHHHHHCCCCCCCCCCCCCCH
IDKRFVSGDTDFFTNEPEFLAHPHLGKYIIGAGIELFGVRSQFGWRIAVALIGVLGVFMT
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEHHHCCHHHHHHHHHHHHHHHH
AVIAARLFESTLIGGIAGFLFAIENNAIVMSRVAILDNVLMIISLIAVWCVLLDRQWYRK
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMSKWVQNRSKHLSQDAKGNYLVSGPLVWWRPWLALAAVLMGMAASVKWSGIFYYFGIIP
HHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YITAIDWTTRKQLGIKYRFQGTFYQVLVSGISSVIISVFVYIALWANYFIVGGWGSSWAT
HHHHCCCCHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCC
YPGNGWAGPLAWVPKIFQSWVNFQVTMYRFNSTLTTPHIYEAPVYTWPFLIRPTNMYWTK
CCCCCCCCHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEEECCCEECCEEEECCCEEEEE
IGDDVRVIIGLPNPLLWWAAVALFIIFALIAIFAPSRRDWRMNFILMTLAGGYFPWFLYV
CCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEEEHHCCHHHHHHHH
NRTIFHFYTIVFEPFMIIMIAAAIYKILEIKTENRLLPTPWVGTRRFEYGSRVLAALRGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
GNRVREACFVMPARIASLDIAPVMQAPLLRLMLVVTFLLAATVCGFVILPINMAWPVHYK
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCHHH
YWESLMILPSWK
HHCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]