| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is fepG [H]
Identifier: 28572239
GI number: 28572239
Start: 59903
End: 60937
Strand: Reverse
Name: fepG [H]
Synonym: TW069
Alternate gene names: 28572239
Gene position: 60937-59903 (Counterclockwise)
Preceding gene: 28572240
Following gene: 28572238
Centisome position: 6.58
GC content: 45.51
Gene sequence:
>1035_bases ATGCCACAGCGGGTGGCGCTGAGAACGTATTGGACAAGTTGCAATCTCGACACTCGTGCTTTGGTGGTCGGGTCTGTTTT TGCATCTCTATGCGTGGGATTACTGTTTCTATCAGTCAGCGTTGGCTATACGCAAACCAGCTTTGCGGATATGTGGAGTG CATTAACTGGCAACGGAGATATCGAATTACGGCAAACAATTCTTGAATGGAGACTTCCGCGGGTGTTATCAGCAATTTTC GTTGGATCCTCTGTTGCCCTAGCCGGAGCACTGTTTCAGTCTCTAACGAGAAACCCTCTTTGCAGTCCAGATATTATTGG ATTCAATGCGGGTGCATTTGCCGGGGTAATAATAGCTGCAGAGCTTTTTGGTGGAGAAAGAACACCGTCAACACTTTCAG CGCTAGCCGGTGGGTTTATTGTTGCCATTCTTGTATATTTCCTGAGCTTGACAAGAACATTTCGCGGGTTACGTTTAGTT ATAGTCGGCATTAGCCTTAACGCAATAATCTCATCGTTCAATACCTACATGAAGTCAATTATCAATGTTGAAATCAGTCA GAACATAAGCATATGGGGTGTTGGAAGCCTGAGCCTAATAACGTGGAGTGACGCACTGCTCTTATACCTGACCTTGATTG CATGCGTCAGTTTGGCCGTTATTGTTATTCCTAAAATGCGAGTTCTTGAAATGGGCGATGACAATGCCGCAAGCCTGGGC GTTTCAGCAAGAAGTACATTGACAATGATGATTGTCATTGCGGTTGTATTGACTGCGGTTTCAACGACAGTGGTTGGCCC AATCAGTTTTGTGGCCCTTACCGCTCCGCATATCGCAAAGTTTCTTGTTGGCAGTAAGGCAATTAATATTTTCCCAACTA TAGCTGTTGGAGGGTTCTTATTGGCCGCATCAGATCTAATTGCAAGAACAATTATCGCACCGTCGCAATTACCAACCGGG GTCGTGACAATTGTATTTGGCGGGGCGTATCTGCTTTATCTATCTATCAGGGGAGCAAATGATTACCGTCGATAA
Upstream 100 bases:
>100_bases TTCTAACACCAACCGGACTAGACGCTGGAGTGGTTGTGCCTTTCTTGGGTGCGCCCATTCTGATTTTCCTGTCAAGAAAG GTAAAAGTCTTTTGAGGATC
Downstream 100 bases:
>100_bases GCTTTCGTTTTCTTACGGAAAAAACAAGGTTCTGCACGACATAAGCATAGAGATAAAACGGGGCTCTTTTATCGCAATTA TTGGCGCTAATGGCTGTGGC
Product: iron-siderophore uptake system integral membrane component
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MPQRVALRTYWTSCNLDTRALVVGSVFASLCVGLLFLSVSVGYTQTSFADMWSALTGNGDIELRQTILEWRLPRVLSAIF VGSSVALAGALFQSLTRNPLCSPDIIGFNAGAFAGVIIAAELFGGERTPSTLSALAGGFIVAILVYFLSLTRTFRGLRLV IVGISLNAIISSFNTYMKSIINVEISQNISIWGVGSLSLITWSDALLLYLTLIACVSLAVIVIPKMRVLEMGDDNAASLG VSARSTLTMMIVIAVVLTAVSTTVVGPISFVALTAPHIAKFLVGSKAINIFPTIAVGGFLLAASDLIARTIIAPSQLPTG VVTIVFGGAYLLYLSIRGANDYRR
Sequences:
>Translated_344_residues MPQRVALRTYWTSCNLDTRALVVGSVFASLCVGLLFLSVSVGYTQTSFADMWSALTGNGDIELRQTILEWRLPRVLSAIF VGSSVALAGALFQSLTRNPLCSPDIIGFNAGAFAGVIIAAELFGGERTPSTLSALAGGFIVAILVYFLSLTRTFRGLRLV IVGISLNAIISSFNTYMKSIINVEISQNISIWGVGSLSLITWSDALLLYLTLIACVSLAVIVIPKMRVLEMGDDNAASLG VSARSTLTMMIVIAVVLTAVSTTVVGPISFVALTAPHIAKFLVGSKAINIFPTIAVGGFLLAASDLIARTIIAPSQLPTG VVTIVFGGAYLLYLSIRGANDYRR >Mature_343_residues PQRVALRTYWTSCNLDTRALVVGSVFASLCVGLLFLSVSVGYTQTSFADMWSALTGNGDIELRQTILEWRLPRVLSAIFV GSSVALAGALFQSLTRNPLCSPDIIGFNAGAFAGVIIAAELFGGERTPSTLSALAGGFIVAILVYFLSLTRTFRGLRLVI VGISLNAIISSFNTYMKSIINVEISQNISIWGVGSLSLITWSDALLLYLTLIACVSLAVIVIPKMRVLEMGDDNAASLGV SARSTLTMMIVIAVVLTAVSTTVVGPISFVALTAPHIAKFLVGSKAINIFPTIAVGGFLLAASDLIARTIIAPSQLPTGV VTIVFGGAYLLYLSIRGANDYRR
Specific function: Part of the binding-protein-dependent transport system for ferric enterobactin. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4779
COG function: function code P; ABC-type enterobactin transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786804, Length=327, Percent_Identity=39.4495412844037, Blast_Score=202, Evalue=3e-53, Organism=Escherichia coli, GI1790740, Length=295, Percent_Identity=32.2033898305085, Blast_Score=127, Evalue=8e-31, Organism=Escherichia coli, GI1786347, Length=305, Percent_Identity=29.1803278688525, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1790741, Length=277, Percent_Identity=28.158844765343, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1786805, Length=276, Percent_Identity=30.7971014492754, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1788004, Length=272, Percent_Identity=28.6764705882353, Blast_Score=86, Evalue=3e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 36435; Mature: 36303
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQRVALRTYWTSCNLDTRALVVGSVFASLCVGLLFLSVSVGYTQTSFADMWSALTGNGD CCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC IELRQTILEWRLPRVLSAIFVGSSVALAGALFQSLTRNPLCSPDIIGFNAGAFAGVIIAA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH ELFGGERTPSTLSALAGGFIVAILVYFLSLTRTFRGLRLVIVGISLNAIISSFNTYMKSI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHH INVEISQNISIWGVGSLSLITWSDALLLYLTLIACVSLAVIVIPKMRVLEMGDDNAASLG HCEEEECCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHCC VSARSTLTMMIVIAVVLTAVSTTVVGPISFVALTAPHIAKFLVGSKAINIFPTIAVGGFL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHH LAASDLIARTIIAPSQLPTGVVTIVFGGAYLLYLSIRGANDYRR HHHHHHHHHHHCCCCCCCCCHHHHHHCCEEEEEEEEECCCCCCC >Mature Secondary Structure PQRVALRTYWTSCNLDTRALVVGSVFASLCVGLLFLSVSVGYTQTSFADMWSALTGNGD CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC IELRQTILEWRLPRVLSAIFVGSSVALAGALFQSLTRNPLCSPDIIGFNAGAFAGVIIAA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH ELFGGERTPSTLSALAGGFIVAILVYFLSLTRTFRGLRLVIVGISLNAIISSFNTYMKSI HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHH INVEISQNISIWGVGSLSLITWSDALLLYLTLIACVSLAVIVIPKMRVLEMGDDNAASLG HCEEEECCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCCHHCC VSARSTLTMMIVIAVVLTAVSTTVVGPISFVALTAPHIAKFLVGSKAINIFPTIAVGGFL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHH LAASDLIARTIIAPSQLPTGVVTIVFGGAYLLYLSIRGANDYRR HHHHHHHHHHHCCCCCCCCCHHHHHHCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1838574; 9278503 [H]