Click here to switch to the map view.

The map label for this gene is 28572223

Identifier: 28572223

GI number: 28572223

Start: 43784

End: 44215

Strand: Direct

Name: 28572223

Synonym: TW052

Alternate gene names: NA

Gene position: 43784-44215 (Clockwise)

Preceding gene: 28572222

Following gene: 28572224

Centisome position: 4.73

GC content: 47.45

Gene sequence:

>432_bases
ATGAAGAAACTTACCACTGTATCTATTACTGTTCTCTCTATCGTTACCCTGTTATTCATAGTCCAACCTGCGCAGGCAAG
AGGGGGCGCAGGGCATATTTCTGTTGTTGCCAGGGGCGGCAATACCTACATTACTGCCACTATTCGTGAAGGGTTTGATC
TTGACGAATGCCTGAAGGGTGCCGTTACAGAGGTTTTTGATGTCGGCACCGGTAGTCATATGGGGTTTTTGGGAAGACTG
GTAAAAATTGTTGTAAAAGGTGCGCGCTTCGCGGGCCCTATCGGGACTGCGATTGGTACCAGCATTGATGTAATTACCGG
TTGTCTAAAGCAGGGTATTGTTCCGGATAAACCGCAGATACCCCATGTAAATTCAGTCTGCACTGTTAACATCTTCTCCC
ACAGACCGGGTCATAGCTGTTATAAGAGGTAG

Upstream 100 bases:

>100_bases
TGCTCAAGATACATCAGTACTGGTGTATCTGTTTAGATAACATATGTTGTGTTTACGTGAATGTGTTACATGACATGGTG
AATTTATACGGAGGTATCTT

Downstream 100 bases:

>100_bases
CCTGTGGCGCGCATCACACGTAATACCTCAGTGCCTGTGCTGATCCTGTGTTGTTTGCTGTCAATCCCCCTTCTTGCTAT
CGTCGGGGTGATTCTTGTTC

Product: secreted protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKKLTTVSITVLSIVTLLFIVQPAQARGGAGHISVVARGGNTYITATIREGFDLDECLKGAVTEVFDVGTGSHMGFLGRL
VKIVVKGARFAGPIGTAIGTSIDVITGCLKQGIVPDKPQIPHVNSVCTVNIFSHRPGHSCYKR

Sequences:

>Translated_143_residues
MKKLTTVSITVLSIVTLLFIVQPAQARGGAGHISVVARGGNTYITATIREGFDLDECLKGAVTEVFDVGTGSHMGFLGRL
VKIVVKGARFAGPIGTAIGTSIDVITGCLKQGIVPDKPQIPHVNSVCTVNIFSHRPGHSCYKR
>Mature_143_residues
MKKLTTVSITVLSIVTLLFIVQPAQARGGAGHISVVARGGNTYITATIREGFDLDECLKGAVTEVFDVGTGSHMGFLGRL
VKIVVKGARFAGPIGTAIGTSIDVITGCLKQGIVPDKPQIPHVNSVCTVNIFSHRPGHSCYKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15073; Mature: 15073

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLTTVSITVLSIVTLLFIVQPAQARGGAGHISVVARGGNTYITATIREGFDLDECLKG
CCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHHH
AVTEVFDVGTGSHMGFLGRLVKIVVKGARFAGPIGTAIGTSIDVITGCLKQGIVPDKPQI
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCC
PHVNSVCTVNIFSHRPGHSCYKR
CCCCCEEEEEEECCCCCCHHCCC
>Mature Secondary Structure
MKKLTTVSITVLSIVTLLFIVQPAQARGGAGHISVVARGGNTYITATIREGFDLDECLKG
CCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHHH
AVTEVFDVGTGSHMGFLGRLVKIVVKGARFAGPIGTAIGTSIDVITGCLKQGIVPDKPQI
HHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCC
PHVNSVCTVNIFSHRPGHSCYKR
CCCCCEEEEEEECCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA