| Definition | Tropheryma whipplei TW08/27, complete genome. |
|---|---|
| Accession | NC_004551 |
| Length | 925,938 |
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The map label for this gene is purE [H]
Identifier: 28572204
GI number: 28572204
Start: 28311
End: 28853
Strand: Direct
Name: purE [H]
Synonym: TW029
Alternate gene names: 28572204
Gene position: 28311-28853 (Clockwise)
Preceding gene: 28572203
Following gene: 28572208
Centisome position: 3.06
GC content: 48.07
Gene sequence:
>543_bases ATGACTGGTAAAAACATCAACGATGAAGGTAGCAAATGCCCCGCTCTTGTTTGGCTCCTAATGGGTTCTGATTCGGATTG GCCCGTTATGTCAGGCGCCGCAGATATCCTGCAGCAGATGAATATATCTTTCAGAGTAAATGTTGTTTCTGCCCATCGCC AGCCGGAAAAGATGATTAGCTGCGCCAAACGCGCTCGTGACATGGGATTCAAAGTTCTGATAGCTGCTGCCGGTGGAGCC GCACACTTGCCCGGAATGCTTGCAAGTGTCACAACTCTCCCTGTTATCGGAGTTCCGGTTGGGCAGAAAAATCTGTCAGG CCTCGATTCTCTTTTATCGATTGTTCAAATGCCCTCTGGTGTTCCGGTGGCCTGTGTCGGCATAGATTCTGCTAAAAACG CTGCCCTTCTGGCCGCAAGGATTTTGGGGGTTCAATCAGCCGACATAGAAGCATCCAGAATAGCAGATAGTTTGTCTGCA TATCAGCAAAGCCTGTTTGATCAATCAAATGAAAAGGACAGAATGATAAATGAGCCGAAATAG
Upstream 100 bases:
>100_bases GAGAGAGTCACATGCGGTGTAAGCAATGCACGTCATGCGTCTCAATGCTGTATACCAATTGCAATATAAGTGACGGTGAT ACAAATTTGGTGGTTCAAAT
Downstream 100 bases:
>100_bases CAAGTTTTTCGCAAAAATTTTCGGGCACATCTTTGGCCTGTTATTTCCGGCATAAAGTTTTACCAGATCGCCTTACGATT TATGTGTTAGAGTTGCGTAT
Product: phosphoribosylaminoimidazole carboxylase catalytic subunit PurE
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTGKNINDEGSKCPALVWLLMGSDSDWPVMSGAADILQQMNISFRVNVVSAHRQPEKMISCAKRARDMGFKVLIAAAGGA AHLPGMLASVTTLPVIGVPVGQKNLSGLDSLLSIVQMPSGVPVACVGIDSAKNAALLAARILGVQSADIEASRIADSLSA YQQSLFDQSNEKDRMINEPK
Sequences:
>Translated_180_residues MTGKNINDEGSKCPALVWLLMGSDSDWPVMSGAADILQQMNISFRVNVVSAHRQPEKMISCAKRARDMGFKVLIAAAGGA AHLPGMLASVTTLPVIGVPVGQKNLSGLDSLLSIVQMPSGVPVACVGIDSAKNAALLAARILGVQSADIEASRIADSLSA YQQSLFDQSNEKDRMINEPK >Mature_179_residues TGKNINDEGSKCPALVWLLMGSDSDWPVMSGAADILQQMNISFRVNVVSAHRQPEKMISCAKRARDMGFKVLIAAAGGAA HLPGMLASVTTLPVIGVPVGQKNLSGLDSLLSIVQMPSGVPVACVGIDSAKNAALLAARILGVQSADIEASRIADSLSAY QQSLFDQSNEKDRMINEPK
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=113, Percent_Identity=55.7522123893805, Blast_Score=132, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6324702, Length=128, Percent_Identity=59.375, Blast_Score=148, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 18947; Mature: 18816
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGKNINDEGSKCPALVWLLMGSDSDWPVMSGAADILQQMNISFRVNVVSAHRQPEKMIS CCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHH CAKRARDMGFKVLIAAAGGAAHLPGMLASVTTLPVIGVPVGQKNLSGLDSLLSIVQMPSG HHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCC VPVACVGIDSAKNAALLAARILGVQSADIEASRIADSLSAYQQSLFDQSNEKDRMINEPK CCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TGKNINDEGSKCPALVWLLMGSDSDWPVMSGAADILQQMNISFRVNVVSAHRQPEKMIS CCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHH CAKRARDMGFKVLIAAAGGAAHLPGMLASVTTLPVIGVPVGQKNLSGLDSLLSIVQMPSG HHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCC VPVACVGIDSAKNAALLAARILGVQSADIEASRIADSLSAYQQSLFDQSNEKDRMINEPK CCEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]