| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is asmA [H]
Identifier: 326424120
GI number: 326424120
Start: 3087221
End: 3089329
Strand: Reverse
Name: asmA [H]
Synonym: NA
Alternate gene names: 326424120
Gene position: 3089329-3087221 (Counterclockwise)
Preceding gene: 27366295
Following gene: 326424119
Centisome position: 94.13
GC content: 46.7
Gene sequence:
>2109_bases ATGAAAAAACTGTTCCTTATTTTGGCTGCGCCTATCGCGGTTGTCGTGATGGCTGCGATAGCGCTAGTGACCTTAGTAAA CCCCAATCAATTTAAACCGCTGATCACCGAACAAGTGGCCAAGCAAACGGGTTTAGAGTTGGTGATTGAAGGCGACATTG AATGGCAATTTTTTCCTTCGATTGGTTTTTCTCTAGGCAAAACGGAATTAAAGAATCCTCAGGGCTTTTCTCAAGAAAAC TTGTTTAAAGTTGAGAGCGTTGGGATCGATATCTCGGTGATGCCTCTACTTGATAAAGTCTTGCAAATTGGTGATGTTCG CCTTGATGGTGCGGAATTCCATCTAGAGACGCGTAAAGATGGGCAAAAGAATATTGATGCGCTAACTCAGCAGCAGAAAG TGCAACAAGAAACGGCTCAGCAAGAGGTGAGCTCGGAGCCCACTACGGATGCTCCACAGCAAGCTGGCGCAGCGGCAGAC TGGCGTATGGAGCTGGCCGGGATCACGGTGAGCAATGCCAAACTTGTTAACCAAGATCGACAAGCGGGGACTTCACTTGA ACTCTATGATGTGAATTTCTCACTTTCAGAGTTCGCCTTTAAGCAATGGACCAAAGCGGAATTTTCAGCCAAAGGAAAAA ACAACCAGCAACAGTTCAGTGCAAACGGCAAGCTTGAATTTCAGCTGGCGCAAGATTTCTCTTCTTATGCTCTGCGCAAT ATTGAGCTAAACAGCCAGTTTAGCGATCCAGCCACGAAGATGGATAACATCAAGTTGGTGCTGGACACCTTCGAGTTTGA TAAAGACAACGCACTGACATTTGAAATCAAAGGCCAAGCATCCGGTATGGATCTTTCGGCCAATGGCTCGGCGCAGTTGC ATGTGGATGCAGCCATCAGCACCGTGATGGTGAAGGCATTCCAGTTGGAATCGCAACTAAATGGGGAATCTCTGCCTCAA TCGCCGATGAAGGTGGCAATGAGCTCTGAGGTGACCTTTGATGTGCCGCGCAGCCATCTATCGCTTGTGCTTAATAAACT GACCGCCAACGCCATTGCTTTAGATGGTAAAGCCGATGTGACGTTAGCTGAGATTCCCAAAGTACGCTTTTCACTGCACA GCCCAGAGATTGATCTCGATGAATTTCTCGGCCTAACGCAGCCATCGCAAGAAACCGCAAGCACAAACAGCAGCAATGAC AAAGACGCGCATCCAGAGGCAAACAACGAAGTTGAGCCTGACCTAAGTGCTTTAAAAACGTTGGATGTGATTGGCCAGGT GAGTATTGATAAGTTCAAAGCCAATAATGCCAAGCTGCAAAATGTCATCACCAAGTTCACGGTGAACCGTGGTATCGCGA CTTTAGATCGTTTTGATGCCAATCTGTATCAAGGTTCTATCAACGCCAGCGCGAAACTGGATGCACGTCGATCACCCGCT ACCTATAGTGTGAAAAAGCGCATCAAAGGTGTTCAGGTGCAACCGCTGTTGGTGGACGTGGCACAAAACGACAAGTTGGA AGGTACTGGCAATATCGATGTTGATGTGAAGGGATCAAGCTTAACGCCAAGCGGTATTCAGAAAAACCTTGTCGGTACAG TTGAAATCAATTTTGCTGATGGTGCTGTCAACGGCATTAACGTCGCGCAGATGATTCGTGAAAACTACGCCAAGATTAAA GGTGAAAAGTTAGACGCCACCGAAGGGGTGCAAAAAACCGACTTCAGTTCAATGACGGCAACGTTGACGTTGAACAAAGG CAAGGTGACAACCAATAACATGCACATGCAATCTCCGCTACTGCGTATTCGTGGGAAAGGAGAAGCAAACTACATCAATC AAACGGTTGATTTTACGGTCAGTACTTCGATTGTGGGATCGCTAGAAGGCCAAGGCGGTAAGGACATCGATGAACTGAGA GACGTGACCATTCCTATCAACATTTCAGGCAGTTGGGCGGATCCAAAATTCAAGTTGGTGTTTGATGATGTGTTAAAGCA AAAAGCCCAAAAAGAGATTGACCGCGGAGTCGAGAAGTTGACCGATAAGATCAAAGATGAGAAAACCAAAGAGGCGGTCG ATGGTTTACTTAAAGGCTTGTTTAACTAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: AsmA protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 702; Mature: 702
Protein sequence:
NA
Sequences:
>Translated_702_residues MKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTGLELVIEGDIEWQFFPSIGFSLGKTELKNPQGFSQEN LFKVESVGIDISVMPLLDKVLQIGDVRLDGAEFHLETRKDGQKNIDALTQQQKVQQETAQQEVSSEPTTDAPQQAGAAAD WRMELAGITVSNAKLVNQDRQAGTSLELYDVNFSLSEFAFKQWTKAEFSAKGKNNQQQFSANGKLEFQLAQDFSSYALRN IELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMDLSANGSAQLHVDAAISTVMVKAFQLESQLNGESLPQ SPMKVAMSSEVTFDVPRSHLSLVLNKLTANAIALDGKADVTLAEIPKVRFSLHSPEIDLDEFLGLTQPSQETASTNSSND KDAHPEANNEVEPDLSALKTLDVIGQVSIDKFKANNAKLQNVITKFTVNRGIATLDRFDANLYQGSINASAKLDARRSPA TYSVKKRIKGVQVQPLLVDVAQNDKLEGTGNIDVDVKGSSLTPSGIQKNLVGTVEINFADGAVNGINVAQMIRENYAKIK GEKLDATEGVQKTDFSSMTATLTLNKGKVTTNNMHMQSPLLRIRGKGEANYINQTVDFTVSTSIVGSLEGQGGKDIDELR DVTIPINISGSWADPKFKLVFDDVLKQKAQKEIDRGVEKLTDKIKDEKTKEAVDGLLKGLFN >Mature_702_residues MKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTGLELVIEGDIEWQFFPSIGFSLGKTELKNPQGFSQEN LFKVESVGIDISVMPLLDKVLQIGDVRLDGAEFHLETRKDGQKNIDALTQQQKVQQETAQQEVSSEPTTDAPQQAGAAAD WRMELAGITVSNAKLVNQDRQAGTSLELYDVNFSLSEFAFKQWTKAEFSAKGKNNQQQFSANGKLEFQLAQDFSSYALRN IELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMDLSANGSAQLHVDAAISTVMVKAFQLESQLNGESLPQ SPMKVAMSSEVTFDVPRSHLSLVLNKLTANAIALDGKADVTLAEIPKVRFSLHSPEIDLDEFLGLTQPSQETASTNSSND KDAHPEANNEVEPDLSALKTLDVIGQVSIDKFKANNAKLQNVITKFTVNRGIATLDRFDANLYQGSINASAKLDARRSPA TYSVKKRIKGVQVQPLLVDVAQNDKLEGTGNIDVDVKGSSLTPSGIQKNLVGTVEINFADGAVNGINVAQMIRENYAKIK GEKLDATEGVQKTDFSSMTATLTLNKGKVTTNNMHMQSPLLRIRGKGEANYINQTVDFTVSTSIVGSLEGQGGKDIDELR DVTIPINISGSWADPKFKLVFDDVLKQKAQKEIDRGVEKLTDKIKDEKTKEAVDGLLKGLFN
Specific function: Involved in the inhibition of assembly of mutant ompF proteins. In general, could be involved in the assembly of outer membrane proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788378, Length=464, Percent_Identity=25.8620689655172, Blast_Score=135, Evalue=9e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 76633; Mature: 76633
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTGLELVIEGDIEWQFFPS CCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEECC IGFSLGKTELKNPQGFSQENLFKVESVGIDISVMPLLDKVLQIGDVRLDGAEFHLETRKD CCCCCCCHHCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHCCEEECCCEEEEECCCC GQKNIDALTQQQKVQQETAQQEVSSEPTTDAPQQAGAAADWRMELAGITVSNAKLVNQDR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEEEEECCCHHHCCHH QAGTSLELYDVNFSLSEFAFKQWTKAEFSAKGKNNQQQFSANGKLEFQLAQDFSSYALRN HCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEEHHHHHHHHEEE IELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMDLSANGSAQLHVDAAIS EEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCEECCCCCEEEEEHHHHH TVMVKAFQLESQLNGESLPQSPMKVAMSSEVTFDVPRSHLSLVLNKLTANAIALDGKADV HHHHHHHHHHHHCCCCCCCCCHHHEEECCCEEEECCHHHHHHHHHHHHCCEEEECCCCCE TLAEIPKVRFSLHSPEIDLDEFLGLTQPSQETASTNSSNDKDAHPEANNEVEPDLSALKT EHHHCCCEEEEECCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH LDVIGQVSIDKFKANNAKLQNVITKFTVNRGIATLDRFDANLYQGSINASAKLDARRSPA HHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCHHEECCCCCCEEECCCCCCC TYSVKKRIKGVQVQPLLVDVAQNDKLEGTGNIDVDVKGSSLTPSGIQKNLVGTVEINFAD HHHHHHHHCCCEECEEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHCCEEEEEEEECC GAVNGINVAQMIRENYAKIKGEKLDATEGVQKTDFSSMTATLTLNKGKVTTNNMHMQSPL CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEECCEEECCCE LRIRGKGEANYINQTVDFTVSTSIVGSLEGQGGKDIDELRDVTIPINISGSWADPKFKLV EEEECCCCCCEECCEEEEEEEEEEEEECCCCCCCCHHHHCCEEEEEEECCCCCCCEEEEH FDDVLKQKAQKEIDRGVEKLTDKIKDEKTKEAVDGLLKGLFN HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKLFLILAAPIAVVVMAAIALVTLVNPNQFKPLITEQVAKQTGLELVIEGDIEWQFFPS CCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCCCEEEECC IGFSLGKTELKNPQGFSQENLFKVESVGIDISVMPLLDKVLQIGDVRLDGAEFHLETRKD CCCCCCCHHCCCCCCCCCCCCEEEEECCCCEEHHHHHHHHHHHCCEEECCCEEEEECCCC GQKNIDALTQQQKVQQETAQQEVSSEPTTDAPQQAGAAADWRMELAGITVSNAKLVNQDR CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCEEEEEEEEECCCHHHCCHH QAGTSLELYDVNFSLSEFAFKQWTKAEFSAKGKNNQQQFSANGKLEFQLAQDFSSYALRN HCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEEHHHHHHHHEEE IELNSQFSDPATKMDNIKLVLDTFEFDKDNALTFEIKGQASGMDLSANGSAQLHVDAAIS EEECCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCEECCCCCEEEEEHHHHH TVMVKAFQLESQLNGESLPQSPMKVAMSSEVTFDVPRSHLSLVLNKLTANAIALDGKADV HHHHHHHHHHHHCCCCCCCCCHHHEEECCCEEEECCHHHHHHHHHHHHCCEEEECCCCCE TLAEIPKVRFSLHSPEIDLDEFLGLTQPSQETASTNSSNDKDAHPEANNEVEPDLSALKT EHHHCCCEEEEECCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH LDVIGQVSIDKFKANNAKLQNVITKFTVNRGIATLDRFDANLYQGSINASAKLDARRSPA HHHHCCCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHCCHHEECCCCCCEEECCCCCCC TYSVKKRIKGVQVQPLLVDVAQNDKLEGTGNIDVDVKGSSLTPSGIQKNLVGTVEINFAD HHHHHHHHCCCEECEEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHCCEEEEEEEECC GAVNGINVAQMIRENYAKIKGEKLDATEGVQKTDFSSMTATLTLNKGKVTTNNMHMQSPL CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEECCEEECCCE LRIRGKGEANYINQTVDFTVSTSIVGSLEGQGGKDIDELRDVTIPINISGSWADPKFKLV EEEECCCCCCEECCEEEEEEEEEEEEECCCCCCCCHHHHCCEEEEEEECCCCCCCEEEEH FDDVLKQKAQKEIDRGVEKLTDKIKDEKTKEAVDGLLKGLFN HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7476172; 9097040; 9278503; 1324907 [H]