| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is bcr [H]
Identifier: 326424084
GI number: 326424084
Start: 2908315
End: 2909589
Strand: Reverse
Name: bcr [H]
Synonym: NA
Alternate gene names: 326424084
Gene position: 2909589-2908315 (Counterclockwise)
Preceding gene: 27366125
Following gene: 27366123
Centisome position: 88.66
GC content: 50.43
Gene sequence:
>1275_bases GTGGAACATGGGCAACGAGATTGTATTGTGACCGGAGTGTTGCGACGCAATCGCAACCAAAACGGAGAATCAATGACCAA TCAATCTCAAGCCGTTAGCCAATCACAAATTAGCCTCTTTTTGTTTGCTGTACTCGGTGCCATCGGTGCGTTGACACCCT TGGCCATCGACATGTATCTACCAGCGATGCCGACCATAGCACGCGATTTGGGCGTCGATGCCGGTGCGGTGCAGTTTACT TTAACCGCTTATACCGCAGGTTTTGCGCTCGGCCAACTGATTCATGGTCCACTGGCAGACAGTTTTGGTCGACGTCCGGT TTTGTTGCTTGGGGTGCTCTTTTTTGGCCTAGCGGCGGTGGTCAGCGCCACGACCAATGGCATTGATGCGTTAACGTATG TACGCACCGCGCAAGGCTTTGCGGGGGCCGCGGCAGCGGTGATCATTCAAGCCGTGGTTCGCGATATGTTTGATCGCGAG GACTTTGCGCGTGCGATGTCGTTCGTCACATTGGTGATCACTATTGCACCCCTTGTCGCGCCAATGATCGGTGGGCACCT AGCCATTTGGTTTGGCTGGCGTTCAATTTTCTGGGTGCTGGCGTTTTTTGCCGTTATCGTGATCGCCCTTGTCTGGTGGC AAATACCAGAAACACTCAAGGTAGAAAACCGACAGCCATTGCGCTTCAAAACGACCATGCGTAACTACTTAAAGTTATGC TGTAACAAAACAGCGATGGGGTTGATTCTGTCTGGCGCGTTCTCTTTCTCCGGAATGTTTGCTTTTTTAACCGCAGGCTC GTTTGTCTATATTGATATTTATGGTATTTCACCCGATCAGTTTGGCTATTTGTTTGGCTTGAACATCGTTGCGATGATCA TCATGACCAGCCTAAATGGCCGAATGGTGAAGAAAGTAGGGTCGCATTTCATGTTGCGTTTGGGGCTGACTGTTCAATTG ATCGCCGGTCTTGGTCTATTTGTCAGTTGGCTACTAGACCTTGGGCTATGGGGCACGGTACCATTCGTGGTTCTATTTAT CGGCACACTTTCTACCATCGGCAGTAACGCAATGGCGCTATTGCTTTCTGGCTACCCTAATATGGCAGGGACGGCGTCTT CTCTGGCGGGCACATTGCGTTTTGGCACTGGCTCTCTAGTTGGTGCTTTGGTTGCGATACTGCCATCAGGAGTGACTTGG CCTATGGTGCTAGTGATGTCTGCGTGCTCTGTGCTTTCAGCACTGTTTTATTGGATTTTCGGACGAAAAGCATAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: major facilitator superfamily permease
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Sulfonamide resistance protein [H]
Number of amino acids: Translated: 424; Mature: 424
Protein sequence:
NA
Sequences:
>Translated_424_residues MEHGQRDCIVTGVLRRNRNQNGESMTNQSQAVSQSQISLFLFAVLGAIGALTPLAIDMYLPAMPTIARDLGVDAGAVQFT LTAYTAGFALGQLIHGPLADSFGRRPVLLLGVLFFGLAAVVSATTNGIDALTYVRTAQGFAGAAAAVIIQAVVRDMFDRE DFARAMSFVTLVITIAPLVAPMIGGHLAIWFGWRSIFWVLAFFAVIVIALVWWQIPETLKVENRQPLRFKTTMRNYLKLC CNKTAMGLILSGAFSFSGMFAFLTAGSFVYIDIYGISPDQFGYLFGLNIVAMIIMTSLNGRMVKKVGSHFMLRLGLTVQL IAGLGLFVSWLLDLGLWGTVPFVVLFIGTLSTIGSNAMALLLSGYPNMAGTASSLAGTLRFGTGSLVGALVAILPSGVTW PMVLVMSACSVLSALFYWIFGRKA >Mature_424_residues MEHGQRDCIVTGVLRRNRNQNGESMTNQSQAVSQSQISLFLFAVLGAIGALTPLAIDMYLPAMPTIARDLGVDAGAVQFT LTAYTAGFALGQLIHGPLADSFGRRPVLLLGVLFFGLAAVVSATTNGIDALTYVRTAQGFAGAAAAVIIQAVVRDMFDRE DFARAMSFVTLVITIAPLVAPMIGGHLAIWFGWRSIFWVLAFFAVIVIALVWWQIPETLKVENRQPLRFKTTMRNYLKLC CNKTAMGLILSGAFSFSGMFAFLTAGSFVYIDIYGISPDQFGYLFGLNIVAMIIMTSLNGRMVKKVGSHFMLRLGLTVQL IAGLGLFVSWLLDLGLWGTVPFVVLFIGTLSTIGSNAMALLLSGYPNMAGTASSLAGTLRFGTGSLVGALVAILPSGVTW PMVLVMSACSVLSALFYWIFGRKA
Specific function: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=373, Percent_Identity=49.3297587131367, Blast_Score=349, Evalue=2e-97, Organism=Escherichia coli, GI48994889, Length=373, Percent_Identity=30.8310991957105, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI87082312, Length=351, Percent_Identity=28.7749287749288, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI1790794, Length=288, Percent_Identity=25.3472222222222, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1790146, Length=371, Percent_Identity=26.6846361185984, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787065, Length=249, Percent_Identity=25.3012048192771, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1790195, Length=138, Percent_Identity=29.7101449275362, Blast_Score=68, Evalue=9e-13, Organism=Escherichia coli, GI87081738, Length=183, Percent_Identity=28.4153005464481, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI2367379, Length=174, Percent_Identity=26.4367816091954, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6324264, Length=181, Percent_Identity=24.3093922651934, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6319657, Length=172, Percent_Identity=27.3255813953488, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45548; Mature: 45548
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHGQRDCIVTGVLRRNRNQNGESMTNQSQAVSQSQISLFLFAVLGAIGALTPLAIDMYL CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAMPTIARDLGVDAGAVQFTLTAYTAGFALGQLIHGPLADSFGRRPVLLLGVLFFGLAAV CCCHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHH VSATTNGIDALTYVRTAQGFAGAAAAVIIQAVVRDMFDREDFARAMSFVTLVITIAPLVA HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH PMIGGHLAIWFGWRSIFWVLAFFAVIVIALVWWQIPETLKVENRQPLRFKTTMRNYLKLC HHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHH CNKTAMGLILSGAFSFSGMFAFLTAGSFVYIDIYGISPDQFGYLFGLNIVAMIIMTSLNG HCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC RMVKKVGSHFMLRLGLTVQLIAGLGLFVSWLLDLGLWGTVPFVVLFIGTLSTIGSNAMAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHH LLSGYPNMAGTASSLAGTLRFGTGSLVGALVAILPSGVTWPMVLVMSACSVLSALFYWIF HCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GRKA CCCC >Mature Secondary Structure MEHGQRDCIVTGVLRRNRNQNGESMTNQSQAVSQSQISLFLFAVLGAIGALTPLAIDMYL CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAMPTIARDLGVDAGAVQFTLTAYTAGFALGQLIHGPLADSFGRRPVLLLGVLFFGLAAV CCCHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHHHH VSATTNGIDALTYVRTAQGFAGAAAAVIIQAVVRDMFDREDFARAMSFVTLVITIAPLVA HHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH PMIGGHLAIWFGWRSIFWVLAFFAVIVIALVWWQIPETLKVENRQPLRFKTTMRNYLKLC HHHCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHH CNKTAMGLILSGAFSFSGMFAFLTAGSFVYIDIYGISPDQFGYLFGLNIVAMIIMTSLNG HCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC RMVKKVGSHFMLRLGLTVQLIAGLGLFVSWLLDLGLWGTVPFVVLFIGTLSTIGSNAMAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHH LLSGYPNMAGTASSLAGTLRFGTGSLVGALVAILPSGVTWPMVLVMSACSVLSALFYWIF HCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH GRKA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8486276; 9278503; 2694948 [H]