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The map label for this gene is cdd [H]

Identifier: 326423993

GI number: 326423993

Start: 2414853

End: 2415761

Strand: Reverse

Name: cdd [H]

Synonym: NA

Alternate gene names: 326423993

Gene position: 2415761-2414853 (Counterclockwise)

Preceding gene: 326423994

Following gene: 27365697

Centisome position: 73.61

GC content: 47.41

Gene sequence:

>909_bases
ATGCAATTACAAGGATTCACCATGAAGAGTCGCTTTGAGAACGCGCTGGCAAGCGCACCAGAATCACTTTCACGCCATCT
AGCGCCTATCATTTTGGCTGCTGACTTTGATGCTTCCCTTTCAACAGTTCAGTTTGATGAGTTACTCAAGCAAACAGGGA
TGACCGATAACCAACTACGTGTTGCGTTGCTTCCCTTTGCTGCCGCTTACTCTTACGCGCCCATCTCTGAGTTTTATGTT
GGTGCGATTGTTCGTGGCCTATCTGGTGCTCTTTATTTTGGCGCGAATATGGAGTTTGATGGGGTCCAGCTTGGACAAAC
GGTTCATGCTGAACAATCGGCTATTAGTCATGCATGGATGAAAGGCGAGCAAGGTCTTTCAGACATCACCATTAATTTCA
GCCCTTGTGGTCACTGCCGTCAGTTCATGAATGAATTATCCAGTGCCAAAGAGCTTAAGATTCAATTGCCAGAGCGCGAA
GAAAAGAAACTACACGACTATCTGCCAGATTCATTTGGCCCATCAGATTTGGGCATCGAATCGGCATTAATGAGCCAAGT
CCATCATGGTTTCGCCACTGAAGATGATGATGCCTTAATGCAACGTGCGGTTGAAGCCATGAACCGCAGTCATGCACCTT
ATACGCACAACTTGAGCGGTGTGGCATTGCAGACCGAAAGTGGACGCGTTTATCTGGGTGCATACGCCGAAAATGCCGCT
TTCAACCCAAGCCTTCCACCACTGCAAGTGGCATTGATCCAGTTGCTTCTCGCGGGTGAGAGATTTGAAAATATTCAGTC
TGCGGCGCTTGTTGAAAGCCATAAAGGCAAAATTAGCCACTTAGCATGTACCCAGTCCACACTGGAAGCCTTAAACCCCG
ATATTCCAGTGAGTTATCTCAGCTTATAG

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: cytidine deaminase

Products: NA

Alternate protein names: Cytidine aminohydrolase; CDA [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:
NA

Sequences:

>Translated_302_residues
MQLQGFTMKSRFENALASAPESLSRHLAPIILAADFDASLSTVQFDELLKQTGMTDNQLRVALLPFAAAYSYAPISEFYV
GAIVRGLSGALYFGANMEFDGVQLGQTVHAEQSAISHAWMKGEQGLSDITINFSPCGHCRQFMNELSSAKELKIQLPERE
EKKLHDYLPDSFGPSDLGIESALMSQVHHGFATEDDDALMQRAVEAMNRSHAPYTHNLSGVALQTESGRVYLGAYAENAA
FNPSLPPLQVALIQLLLAGERFENIQSAALVESHKGKISHLACTQSTLEALNPDIPVSYLSL
>Mature_302_residues
MQLQGFTMKSRFENALASAPESLSRHLAPIILAADFDASLSTVQFDELLKQTGMTDNQLRVALLPFAAAYSYAPISEFYV
GAIVRGLSGALYFGANMEFDGVQLGQTVHAEQSAISHAWMKGEQGLSDITINFSPCGHCRQFMNELSSAKELKIQLPERE
EKKLHDYLPDSFGPSDLGIESALMSQVHHGFATEDDDALMQRAVEAMNRSHAPYTHNLSGVALQTESGRVYLGAYAENAA
FNPSLPPLQVALIQLLLAGERFENIQSAALVESHKGKISHLACTQSTLEALNPDIPVSYLSL

Specific function: This enzyme scavenge exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788465, Length=284, Percent_Identity=52.8169014084507, Blast_Score=273, Evalue=1e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR013171
- InterPro:   IPR006263
- InterPro:   IPR016193
- InterPro:   IPR020797 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1; PF08211 dCMP_cyt_deam_2 [H]

EC number: =3.5.4.5 [H]

Molecular weight: Translated: 32917; Mature: 32917

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLQGFTMKSRFENALASAPESLSRHLAPIILAADFDASLSTVQFDELLKQTGMTDNQLR
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCEE
VALLPFAAAYSYAPISEFYVGAIVRGLSGALYFGANMEFDGVQLGQTVHAEQSAISHAWM
EEEEHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEECCCHHHHHHHHHHHHHH
KGEQGLSDITINFSPCGHCRQFMNELSSAKELKIQLPEREEKKLHDYLPDSFGPSDLGIE
HCCCCCCEEEEECCCCHHHHHHHHHHCCHHEEEEECCCHHHHHHHHHCCCCCCCCCCCHH
SALMSQVHHGFATEDDDALMQRAVEAMNRSHAPYTHNLSGVALQTESGRVYLGAYAENAA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEECCCCC
FNPSLPPLQVALIQLLLAGERFENIQSAALVESHKGKISHLACTQSTLEALNPDIPVSYL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHH
SL
CC
>Mature Secondary Structure
MQLQGFTMKSRFENALASAPESLSRHLAPIILAADFDASLSTVQFDELLKQTGMTDNQLR
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCEE
VALLPFAAAYSYAPISEFYVGAIVRGLSGALYFGANMEFDGVQLGQTVHAEQSAISHAWM
EEEEHHHHHHCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCEECCCHHHHHHHHHHHHHH
KGEQGLSDITINFSPCGHCRQFMNELSSAKELKIQLPEREEKKLHDYLPDSFGPSDLGIE
HCCCCCCEEEEECCCCHHHHHHHHHHCCHHEEEEECCCHHHHHHHHHCCCCCCCCCCCHH
SALMSQVHHGFATEDDDALMQRAVEAMNRSHAPYTHNLSGVALQTESGRVYLGAYAENAA
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCEEEEEEECCCCC
FNPSLPPLQVALIQLLLAGERFENIQSAALVESHKGKISHLACTQSTLEALNPDIPVSYL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHH
SL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA