Definition Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence.
Accession NC_004459
Length 3,281,866

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The map label for this gene is dinG [H]

Identifier: 326423941

GI number: 326423941

Start: 2113681

End: 2115792

Strand: Reverse

Name: dinG [H]

Synonym: NA

Alternate gene names: 326423941

Gene position: 2115792-2113681 (Counterclockwise)

Preceding gene: 27365449

Following gene: 27365445

Centisome position: 64.47

GC content: 45.93

Gene sequence:

>2112_bases
GTGCTAGAATCCGTGGGTCTGAACATGGGTCACAGTATGCTAACCAGTAAAATTCAAAGTTCTATTCGCACCAGCTATCA
AAACCTTCAAAACCAGCTTGAAAACTTTATTCCTCGCCGAGCGCAAAACTATCTCGTTGCGGAGATGGCAAAAACACTTT
GTGGTTCCTATCACAAAAAAAATCGCATTCTTGTTGCGGAAGCCGGGACGGGGATCGGGAAATCACTCTCCTACCTTATG
GCTGCAATCCCAGTGGCAGTACTTAACAACCGTAAAGTGGTGATTTCAACTGCAACAGTTGCTCTACAAGAGCAATTGCT
GAATAAAGACCTGCCTTTGTACAGAAGAATTTCAGACTTAAACTTTTCTTTTGTTTTAGCGAAAGGCAGACAACGCTATT
GCTGTGCCGAAAAACTCGCTAGCGCCAGTGGCGTCGACGGTGGCCAGCTAGCGATGTTTGAAACAAAACCCAAAAAGAAA
GACATAGAGCTGTTAACCACGATGTATCAGAGCTTAGCCAAGGGGAAATGGGATGGCGATAGAGACAGTTGGCCAAAACC
GATTGATGACAGCCTCTGGCAATTGATTGTCAGCGACAAACATAGCTGTAACAACAATCTGCCGATTCATCGCCACTGTC
CTTTTCAAAAAGCACGCTCAGAGCTCGACAAGCACGATGTCATTATTGCCAATCACAGTTTAGTCATGGCTGATGCAGAC
TTGGGCGGCGGCGTTATCCTCTCTGAACCGGAAAATACCATTTATGTCTTTGATGAAGCGCACCACCTTCCTCACGTTGC
TCGAGATCATGCCTCTGCCGCATCTAGCCTTAAAGGCGCGGCCGCTTGGTTAGAACGTTTAAACCAAAACAGCAGCAAGT
TTGCAGCCTTGGCGGATGAAAAACGCGTTAGCCGCTTTCGCAATGAGCTTCAAGAATCCGTGCAAGTAGTGATTCCCTCT
TTACTACAGCTTGCAAAACAGTTCGACCCAGCGAATTTTGAGGAAGGCACCTATCGATTTGAGCATGGCCAACTCCCTTC
GTGGCTAGAAGAGCAGGCAAAAGAGCTCAAAATTTTCAGCCAGAAAGCCCATCAAGCGGTCGCTAAAATTGCCGATCTCG
TCGCCGAACGTGTTAAAGATGGTGAACTTTCCGCAAAAACTGCCGAGCCCGCTTTGGCTGAATTGGGTTTCTATATTCAA
CGAACTGAAAATCTGTCACAAGTGTGGCGATTGATGGCAGAACCGACCCGTGAAAAAGGAGCGCCTCTTGCTCGCTGGCT
TGAAAAACATCCGGATCGCGAAGGTGATGTTATCGTCAGTGTCTCTCCTTTAGAGGTAGGCTGGCAGCTGGACCAACAAA
TCTGGAGTCGCTGCGTCGGCGCATTGTTGGTTTCTGCAACCATGAGAGCACTGAACTCATTTCAATATTTCTGTCATCAA
GCAGGCATTGATATGCGTGAGGAATCGGGAGTCCAATTCCTAGCTTTGGCCTCACCTTTCGATTATCAAAACCAAGCAGA
GTTGCACCTACCTGCCCTCAAATACGAACCGCAAGCACCGCAGTTTACGGAATATCTTATCGAGATTTTGCCTAAGTATT
TAAAAGACAAACAGGCAAACTTGGTTTTATTCTCTTCTTATTGGCAAATGAACCAAGTTGCGGAAGGTTTAGCAACAGAA
TTGGTAAAAAGAGGATGGGCTTTGCAAAAGCAAGGCGAAACATCACGCACTGAAATTCTAAAAAAACATAAAGAACTAGT
AGAAAAAGGTGAAACAAGCATTCTTTTTGGTACAGGTAGCTTTTCAGAGGGGCTGGATTTGCCCGGCGAGCTTCTGGAAA
ACTTGGTGATCACCAAAATACCTTTTGCTGTCCCAACTTCACCAGTAGAACAAGCGCATTCAGAATATATTGAGTCTCGT
GGAGGTAATCCATTTATGCAGATCACTGTCCCAGAGGCGAGTAAGAAGATGATTCAATCGGTAGGACGATTACTGCGCAA
AGAGCGAGATTCTGGTACAGTCACCATCCTCGACAAGAGGTTGATTTCGAAGCGGTATGGTAAAGCGATTCTGGACTCCC
TGCCTCCTTTTAAACGAATCATTGAAAAATAG

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: ATP-dependent helicase DinG/Rad3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 703; Mature: 703

Protein sequence:
NA

Sequences:

>Translated_703_residues
MLESVGLNMGHSMLTSKIQSSIRTSYQNLQNQLENFIPRRAQNYLVAEMAKTLCGSYHKKNRILVAEAGTGIGKSLSYLM
AAIPVAVLNNRKVVISTATVALQEQLLNKDLPLYRRISDLNFSFVLAKGRQRYCCAEKLASASGVDGGQLAMFETKPKKK
DIELLTTMYQSLAKGKWDGDRDSWPKPIDDSLWQLIVSDKHSCNNNLPIHRHCPFQKARSELDKHDVIIANHSLVMADAD
LGGGVILSEPENTIYVFDEAHHLPHVARDHASAASSLKGAAAWLERLNQNSSKFAALADEKRVSRFRNELQESVQVVIPS
LLQLAKQFDPANFEEGTYRFEHGQLPSWLEEQAKELKIFSQKAHQAVAKIADLVAERVKDGELSAKTAEPALAELGFYIQ
RTENLSQVWRLMAEPTREKGAPLARWLEKHPDREGDVIVSVSPLEVGWQLDQQIWSRCVGALLVSATMRALNSFQYFCHQ
AGIDMREESGVQFLALASPFDYQNQAELHLPALKYEPQAPQFTEYLIEILPKYLKDKQANLVLFSSYWQMNQVAEGLATE
LVKRGWALQKQGETSRTEILKKHKELVEKGETSILFGTGSFSEGLDLPGELLENLVITKIPFAVPTSPVEQAHSEYIESR
GGNPFMQITVPEASKKMIQSVGRLLRKERDSGTVTILDKRLISKRYGKAILDSLPPFKRIIEK
>Mature_703_residues
MLESVGLNMGHSMLTSKIQSSIRTSYQNLQNQLENFIPRRAQNYLVAEMAKTLCGSYHKKNRILVAEAGTGIGKSLSYLM
AAIPVAVLNNRKVVISTATVALQEQLLNKDLPLYRRISDLNFSFVLAKGRQRYCCAEKLASASGVDGGQLAMFETKPKKK
DIELLTTMYQSLAKGKWDGDRDSWPKPIDDSLWQLIVSDKHSCNNNLPIHRHCPFQKARSELDKHDVIIANHSLVMADAD
LGGGVILSEPENTIYVFDEAHHLPHVARDHASAASSLKGAAAWLERLNQNSSKFAALADEKRVSRFRNELQESVQVVIPS
LLQLAKQFDPANFEEGTYRFEHGQLPSWLEEQAKELKIFSQKAHQAVAKIADLVAERVKDGELSAKTAEPALAELGFYIQ
RTENLSQVWRLMAEPTREKGAPLARWLEKHPDREGDVIVSVSPLEVGWQLDQQIWSRCVGALLVSATMRALNSFQYFCHQ
AGIDMREESGVQFLALASPFDYQNQAELHLPALKYEPQAPQFTEYLIEILPKYLKDKQANLVLFSSYWQMNQVAEGLATE
LVKRGWALQKQGETSRTEILKKHKELVEKGETSILFGTGSFSEGLDLPGELLENLVITKIPFAVPTSPVEQAHSEYIESR
GGNPFMQITVPEASKKMIQSVGRLLRKERDSGTVTILDKRLISKRYGKAILDSLPPFKRIIEK

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787018, Length=718, Percent_Identity=33.8440111420613, Blast_Score=340, Evalue=2e-94,
Organism=Escherichia coli, GI1788110, Length=692, Percent_Identity=27.6011560693642, Blast_Score=207, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650 [H]

Pfam domain/function: PF06733 DEAD_2 [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 78902; Mature: 78902

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLESVGLNMGHSMLTSKIQSSIRTSYQNLQNQLENFIPRRAQNYLVAEMAKTLCGSYHKK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NRILVAEAGTGIGKSLSYLMAAIPVAVLNNRKVVISTATVALQEQLLNKDLPLYRRISDL
CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHCC
NFSFVLAKGRQRYCCAEKLASASGVDGGQLAMFETKPKKKDIELLTTMYQSLAKGKWDGD
CEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC
RDSWPKPIDDSLWQLIVSDKHSCNNNLPIHRHCPFQKARSELDKHDVIIANHSLVMADAD
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCEEEEEECC
LGGGVILSEPENTIYVFDEAHHLPHVARDHASAASSLKGAAAWLERLNQNSSKFAALADE
CCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
KRVSRFRNELQESVQVVIPSLLQLAKQFDPANFEEGTYRFEHGQLPSWLEEQAKELKIFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHH
QKAHQAVAKIADLVAERVKDGELSAKTAEPALAELGFYIQRTENLSQVWRLMAEPTREKG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
APLARWLEKHPDREGDVIVSVSPLEVGWQLDQQIWSRCVGALLVSATMRALNSFQYFCHQ
CHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIDMREESGVQFLALASPFDYQNQAELHLPALKYEPQAPQFTEYLIEILPKYLKDKQAN
CCCCCCHHCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
LVLFSSYWQMNQVAEGLATELVKRGWALQKQGETSRTEILKKHKELVEKGETSILFGTGS
EEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC
FSEGLDLPGELLENLVITKIPFAVPTSPVEQAHSEYIESRGGNPFMQITVPEASKKMIQS
CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHH
VGRLLRKERDSGTVTILDKRLISKRYGKAILDSLPPFKRIIEK
HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MLESVGLNMGHSMLTSKIQSSIRTSYQNLQNQLENFIPRRAQNYLVAEMAKTLCGSYHKK
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NRILVAEAGTGIGKSLSYLMAAIPVAVLNNRKVVISTATVALQEQLLNKDLPLYRRISDL
CEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCCCHHHHHHCC
NFSFVLAKGRQRYCCAEKLASASGVDGGQLAMFETKPKKKDIELLTTMYQSLAKGKWDGD
CEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC
RDSWPKPIDDSLWQLIVSDKHSCNNNLPIHRHCPFQKARSELDKHDVIIANHSLVMADAD
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEECCEEEEEECC
LGGGVILSEPENTIYVFDEAHHLPHVARDHASAASSLKGAAAWLERLNQNSSKFAALADE
CCCCEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
KRVSRFRNELQESVQVVIPSLLQLAKQFDPANFEEGTYRFEHGQLPSWLEEQAKELKIFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHH
QKAHQAVAKIADLVAERVKDGELSAKTAEPALAELGFYIQRTENLSQVWRLMAEPTREKG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
APLARWLEKHPDREGDVIVSVSPLEVGWQLDQQIWSRCVGALLVSATMRALNSFQYFCHQ
CHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGIDMREESGVQFLALASPFDYQNQAELHLPALKYEPQAPQFTEYLIEILPKYLKDKQAN
CCCCCCHHCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
LVLFSSYWQMNQVAEGLATELVKRGWALQKQGETSRTEILKKHKELVEKGETSILFGTGS
EEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCC
FSEGLDLPGELLENLVITKIPFAVPTSPVEQAHSEYIESRGGNPFMQITVPEASKKMIQS
CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHH
VGRLLRKERDSGTVTILDKRLISKRYGKAILDSLPPFKRIIEK
HHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8396546; 8385320 [H]