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The map label for this gene is 326423823

Identifier: 326423823

GI number: 326423823

Start: 1316669

End: 1317652

Strand: Reverse

Name: 326423823

Synonym: NA

Alternate gene names: NA

Gene position: 1317652-1316669 (Counterclockwise)

Preceding gene: 27364741

Following gene: 161501828

Centisome position: 40.15

GC content: 49.49

Gene sequence:

>984_bases
GTGATGCAAAGAATTCTTCATTCCTTACTCTTGCTAATTGTCATTCCTCTGTTAAATGGCTGTTTTTTTTCTACGCAGGA
TGAACAACGTTGGGAAATCGAACCACAAGGTTCCACCAGTTTCGCCTTAAGTCGTGATGGCCGTTTTGCGTTGCTCTACT
CAACCCAACGCCATTTGGTGCTGTGGGATTTGGTCGAGAGCAAAGAACTTGCCCAACTCGGCGAGCAAGATCCTGAAGCC
AACGTCGTGTCCAACATCCGAATCTCTGATAACGGCCGCTTCGCGGTGACCGCCACGCAAATGAACTTTGCGGTGTGGGA
TCTTGGCTTAAGCCAGTCTGAAGGTCTTTGGTCGATCTCAGACGGATTGATCCGTGATGTTGATATCAGCAGCAACGGCG
AACAAGTCCTCCTTGGTTTGTCCAACGGGAAAGCCATTTACGTCAACTTAGTCACCGGACGGCGAATGGAGTTCCTTGCT
CACCGAGAAAAAGTGAATTCTGTCGCCATCTCCGCCAATGGCCGTTTCGCACTGACTGGCGGAAATGATTACAAAGCCTA
CCTTTGGGATACCGAAACAGGATTAGTCATGCGCACCTTTGAGCACGAAGAGCGCGTCAATCGTGTTGCTTTACAACGTG
ACGGCCAATTAGCCTTCACCTCTGATGGCGGCAACCAAGCGATTGTGTGGGATTTGAAAACGGGTCAACAAATTAGCCAA
TTAAAAAGTTGGTCACGCCAGTTAATCTTCTCTACGGCACGTTTTTCTGATGATGGTCGTTTACTGGTGACAGGAACCCC
TTCAGGTCGAGTCGCGGTTTGGAATACCACCAGCGGTAAACAAATTGAAAGTTATGAGGTGGAACCGTTAAAAGATGCTC
GCCCTCCTCGCGCGGTAGTGTATGATGCCGCTTTTGATGCTCAGCGCCGAGTGATTACGGCAACCTCTGCAGGCATCGCC
CAAGCATGGCCATTGGAGAATTAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: WD40 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:
NA

Sequences:

>Translated_327_residues
MMQRILHSLLLLIVIPLLNGCFFSTQDEQRWEIEPQGSTSFALSRDGRFALLYSTQRHLVLWDLVESKELAQLGEQDPEA
NVVSNIRISDNGRFAVTATQMNFAVWDLGLSQSEGLWSISDGLIRDVDISSNGEQVLLGLSNGKAIYVNLVTGRRMEFLA
HREKVNSVAISANGRFALTGGNDYKAYLWDTETGLVMRTFEHEERVNRVALQRDGQLAFTSDGGNQAIVWDLKTGQQISQ
LKSWSRQLIFSTARFSDDGRLLVTGTPSGRVAVWNTTSGKQIESYEVEPLKDARPPRAVVYDAAFDAQRRVITATSAGIA
QAWPLEN
>Mature_327_residues
MMQRILHSLLLLIVIPLLNGCFFSTQDEQRWEIEPQGSTSFALSRDGRFALLYSTQRHLVLWDLVESKELAQLGEQDPEA
NVVSNIRISDNGRFAVTATQMNFAVWDLGLSQSEGLWSISDGLIRDVDISSNGEQVLLGLSNGKAIYVNLVTGRRMEFLA
HREKVNSVAISANGRFALTGGNDYKAYLWDTETGLVMRTFEHEERVNRVALQRDGQLAFTSDGGNQAIVWDLKTGQQISQ
LKSWSRQLIFSTARFSDDGRLLVTGTPSGRVAVWNTTSGKQIESYEVEPLKDARPPRAVVYDAAFDAQRRVITATSAGIA
QAWPLEN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 15 WD repeats [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319651, Length=214, Percent_Identity=23.3644859813084, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6319675, Length=119, Percent_Identity=30.2521008403361, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000767
- InterPro:   IPR020472
- InterPro:   IPR002182
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00931 NB-ARC; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 36440; Mature: 36440

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS00678 WD_REPEATS_1 ; PS50082 WD_REPEATS_2 ; PS50294 WD_REPEATS_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQRILHSLLLLIVIPLLNGCFFSTQDEQRWEIEPQGSTSFALSRDGRFALLYSTQRHLV
CHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCEEEEECCCCEEEEEECCCEEE
LWDLVESKELAQLGEQDPEANVVSNIRISDNGRFAVTATQMNFAVWDLGLSQSEGLWSIS
EEEECCCHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCCEEEEC
DGLIRDVDISSNGEQVLLGLSNGKAIYVNLVTGRRMEFLAHREKVNSVAISANGRFALTG
CCCEEEEEECCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHCCEEEEECCCEEEEEC
GNDYKAYLWDTETGLVMRTFEHEERVNRVALQRDGQLAFTSDGGNQAIVWDLKTGQQISQ
CCCEEEEEEECCCCEEEEEHHHHHHHHHHHEECCCCEEEECCCCCEEEEEEECCCHHHHH
LKSWSRQLIFSTARFSDDGRLLVTGTPSGRVAVWNTTSGKQIESYEVEPLKDARPPRAVV
HHHHHHHHEEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEE
YDAAFDAQRRVITATSAGIAQAWPLEN
EECCCCCCCEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MMQRILHSLLLLIVIPLLNGCFFSTQDEQRWEIEPQGSTSFALSRDGRFALLYSTQRHLV
CHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEECCCCCCEEEEECCCCEEEEEECCCEEE
LWDLVESKELAQLGEQDPEANVVSNIRISDNGRFAVTATQMNFAVWDLGLSQSEGLWSIS
EEEECCCHHHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCCEEEEC
DGLIRDVDISSNGEQVLLGLSNGKAIYVNLVTGRRMEFLAHREKVNSVAISANGRFALTG
CCCEEEEEECCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHCCEEEEECCCEEEEEC
GNDYKAYLWDTETGLVMRTFEHEERVNRVALQRDGQLAFTSDGGNQAIVWDLKTGQQISQ
CCCEEEEEEECCCCEEEEEHHHHHHHHHHHEECCCCEEEECCCCCEEEEEEECCCHHHHH
LKSWSRQLIFSTARFSDDGRLLVTGTPSGRVAVWNTTSGKQIESYEVEPLKDARPPRAVV
HHHHHHHHEEEEEEECCCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCCCCCCCCEEE
YDAAFDAQRRVITATSAGIAQAWPLEN
EECCCCCCCEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]