| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is glnM [H]
Identifier: 326423793
GI number: 326423793
Start: 1025737
End: 1026477
Strand: Reverse
Name: glnM [H]
Synonym: NA
Alternate gene names: 326423793
Gene position: 1026477-1025737 (Counterclockwise)
Preceding gene: 27364459
Following gene: 326423789
Centisome position: 31.28
GC content: 47.37
Gene sequence:
>741_bases GTGACCTGTCGATATTTATGTTTAATGATGTTACTGCCACTCACTGGCTGTTCTGACTATCAATGGGGCTGGTATGTGCT TGATCCGACGACCGAGCAAGGCCTAACGAACGTGAAGTTTCTTATCGCTGGCTTTGCCGACACCATCAGCGTATCGCTAC TCAGTATGCTGTTTGCCATGACTCTGGGCTTAATGGTTGCCCTACCGGCCCTTTCTCCCCGCAAATCCCTACAACGCTTA AACCGGATTTACGTTGAAGTAATACGTGCCATTCCCGTGTTGGTTCTGCTGTTGTGGGTGTATTACGGCCTACCCACATT ACTCGATGTTTCACTAGACCATTATTGGGCGGGAATTATTGCACTGACGATCGCGGAAAGTGCATTTATGGCAGAAGTAT TTCGCGGTGGCATTCAATCTATCGGTCGTGGCCAACATGAAGCAGCAAAGTCGCTTGGTCTCAACTATTGGCAAAAAATG CGTTTGGTGATTTTGCCGCAAGCATTTCGTCAGATGCTGCCCGCGCTCGGCAACCAGTTTGTTTATATTCTCAAGATGAG CTCATTGGTCAGTGTCATTGGTCTAAGTGATTTGACGAGGCGAGCCAATGAGTTGGTGGTGAATGAGTACTTACCTCTAG AGATTTATACTTTCTTAGTGCTGGAATATTTGCTGTTGATCTTGATGGTGTCTCAAGCCGTACGTTGGCTAGAAAAGCGC AGTGCCATTCCCAGCCATTAG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: putative amino acid ABC transporter permease
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
NA
Sequences:
>Translated_246_residues MTCRYLCLMMLLPLTGCSDYQWGWYVLDPTTEQGLTNVKFLIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQRL NRIYVEVIRAIPVLVLLLWVYYGLPTLLDVSLDHYWAGIIALTIAESAFMAEVFRGGIQSIGRGQHEAAKSLGLNYWQKM RLVILPQAFRQMLPALGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLLLILMVSQAVRWLEKR SAIPSH >Mature_245_residues TCRYLCLMMLLPLTGCSDYQWGWYVLDPTTEQGLTNVKFLIAGFADTISVSLLSMLFAMTLGLMVALPALSPRKSLQRLN RIYVEVIRAIPVLVLLLWVYYGLPTLLDVSLDHYWAGIIALTIAESAFMAEVFRGGIQSIGRGQHEAAKSLGLNYWQKMR LVILPQAFRQMLPALGNQFVYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLLLILMVSQAVRWLEKRS AIPSH
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787030, Length=207, Percent_Identity=34.2995169082126, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1786873, Length=230, Percent_Identity=31.7391304347826, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1788226, Length=197, Percent_Identity=36.0406091370558, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI87082239, Length=203, Percent_Identity=32.512315270936, Blast_Score=105, Evalue=2e-24, Organism=Escherichia coli, GI1786874, Length=240, Percent_Identity=26.6666666666667, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788646, Length=206, Percent_Identity=28.6407766990291, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=28.110599078341, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI48994930, Length=125, Percent_Identity=39.2, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787087, Length=217, Percent_Identity=21.6589861751152, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787086, Length=167, Percent_Identity=26.9461077844311, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 27823; Mature: 27691
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCRYLCLMMLLPLTGCSDYQWGWYVLDPTTEQGLTNVKFLIAGFADTISVSLLSMLFAM CHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TLGLMVALPALSPRKSLQRLNRIYVEVIRAIPVLVLLLWVYYGLPTLLDVSLDHYWAGII HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ALTIAESAFMAEVFRGGIQSIGRGQHEAAKSLGLNYWQKMRLVILPQAFRQMLPALGNQF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHH VYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLLLILMVSQAVRWLEKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIPSH CCCCCC >Mature Secondary Structure TCRYLCLMMLLPLTGCSDYQWGWYVLDPTTEQGLTNVKFLIAGFADTISVSLLSMLFAM HHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TLGLMVALPALSPRKSLQRLNRIYVEVIRAIPVLVLLLWVYYGLPTLLDVSLDHYWAGII HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ALTIAESAFMAEVFRGGIQSIGRGQHEAAKSLGLNYWQKMRLVILPQAFRQMLPALGNQF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCHH VYILKMSSLVSVIGLSDLTRRANELVVNEYLPLEIYTFLVLEYLLLILMVSQAVRWLEKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIPSH CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]