Click here to switch to the map view.

The map label for this gene is gspC [H]

Identifier: 326423781

GI number: 326423781

Start: 886475

End: 887404

Strand: Reverse

Name: gspC [H]

Synonym: NA

Alternate gene names: 326423781

Gene position: 887404-886475 (Counterclockwise)

Preceding gene: 27364331

Following gene: 27364325

Centisome position: 27.04

GC content: 50.22

Gene sequence:

>930_bases
GTGAAACCATCAGAGCTGAGTGCCGGATTGGCCAATAGCCCATTGCTGACGCGGATGATTGCTAACAACGGCATGATTCA
GAGTCGAGCGAGTGCTTTATTAGCAGGCGTGCTGGTGGCTTTGACAGGCTGGACTTTAGGGCAAGTCGTCTGGCTAACAC
AAGAGAGCAATACGCAGATCGTCGCTTGGCGACCTGCACCGCAGCAAAACGCACAAGGTAAACAAGGTGAGCGATTAAAC
CTCGCCGATCTGCAAGCCATCAATTTGTTTGGGGTTTACAACGAGAATAAACCTAAGCCTGTTGTCAGCCAGCCGGTGGT
GCAAGACGCGCCTAAAACGCGGCTAAATTTGGTGTTAGTTGGGGCGGTGGCGAGCAGCAATCCTCAAACCAGCTTGGCCG
TTATCGCCAACCGTGGTCAGCAAGCAACCTACGGGGTTGGGGAAGAAATCGAAGGCACTCGCGCTAAGTTAAAAGCAGTT
CTGGTTGATCGTGTGATCATCGATAATGAAGGGCGTGACGAGACCCTGATGCTTGAAGGCGTGGAATACAAGAAATTGTC
TGAATCTACTCCGCGTGTCATTCCGTCATCGACGATCGCTAAGAATAACCCGCCAGATACGGATGAGCAGCTAGCGCAAA
TTCGAGAAGAAATTACCGCCGATCCGCAGAAGATTTTCCAATACGTGCGTTTGTCTCAAGTGAAGCAAGAAGACAAAGTG
ATTGGTTATCGCGTGAGTCCGGGAAAAAGCCCACAACTGTTTGAAGCCGTTGGGTTACAAGATGGGGACATTGCTGTGCA
GTTAAATGGCAATGATCTCACCGACCCAGCCGCCATGGGCAAAATTTTTAATGCTGTTTCAGAGCTCACCGAGTTGAACC
TCACGGTGGAACGAGACGGACAGCAGCATGATATTTACATCCAGTTTTAA

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: general secretion pathway protein C

Products: NA

Alternate protein names: Cholera toxin secretion protein epsC [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:
NA

Sequences:

>Translated_309_residues
MKPSELSAGLANSPLLTRMIANNGMIQSRASALLAGVLVALTGWTLGQVVWLTQESNTQIVAWRPAPQQNAQGKQGERLN
LADLQAINLFGVYNENKPKPVVSQPVVQDAPKTRLNLVLVGAVASSNPQTSLAVIANRGQQATYGVGEEIEGTRAKLKAV
LVDRVIIDNEGRDETLMLEGVEYKKLSESTPRVIPSSTIAKNNPPDTDEQLAQIREEITADPQKIFQYVRLSQVKQEDKV
IGYRVSPGKSPQLFEAVGLQDGDIAVQLNGNDLTDPAAMGKIFNAVSELTELNLTVERDGQQHDIYIQF
>Mature_309_residues
MKPSELSAGLANSPLLTRMIANNGMIQSRASALLAGVLVALTGWTLGQVVWLTQESNTQIVAWRPAPQQNAQGKQGERLN
LADLQAINLFGVYNENKPKPVVSQPVVQDAPKTRLNLVLVGAVASSNPQTSLAVIANRGQQATYGVGEEIEGTRAKLKAV
LVDRVIIDNEGRDETLMLEGVEYKKLSESTPRVIPSSTIAKNNPPDTDEQLAQIREEITADPQKIFQYVRLSQVKQEDKV
IGYRVSPGKSPQLFEAVGLQDGDIAVQLNGNDLTDPAAMGKIFNAVSELTELNLTVERDGQQHDIYIQF

Specific function: Required for secretion of cholera toxin through the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP C family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001639 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33619; Mature: 33619

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSELSAGLANSPLLTRMIANNGMIQSRASALLAGVLVALTGWTLGQVVWLTQESNTQI
CCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEE
VAWRPAPQQNAQGKQGERLNLADLQAINLFGVYNENKPKPVVSQPVVQDAPKTRLNLVLV
EEECCCCCCCCCCCCCCCCCHHHEEEEEEEEEECCCCCCCCCCCCHHHCCCCCEEEEEEE
GAVASSNPQTSLAVIANRGQQATYGVGEEIEGTRAKLKAVLVDRVIIDNEGRDETLMLEG
EEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCEEEEEC
VEYKKLSESTPRVIPSSTIAKNNPPDTDEQLAQIREEITADPQKIFQYVRLSQVKQEDKV
CCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE
IGYRVSPGKSPQLFEAVGLQDGDIAVQLNGNDLTDPAAMGKIFNAVSELTELNLTVERDG
EEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEECCC
QQHDIYIQF
CCCEEEEEC
>Mature Secondary Structure
MKPSELSAGLANSPLLTRMIANNGMIQSRASALLAGVLVALTGWTLGQVVWLTQESNTQI
CCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEE
VAWRPAPQQNAQGKQGERLNLADLQAINLFGVYNENKPKPVVSQPVVQDAPKTRLNLVLV
EEECCCCCCCCCCCCCCCCCHHHEEEEEEEEEECCCCCCCCCCCCHHHCCCCCEEEEEEE
GAVASSNPQTSLAVIANRGQQATYGVGEEIEGTRAKLKAVLVDRVIIDNEGRDETLMLEG
EEEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCEEEEEC
VEYKKLSESTPRVIPSSTIAKNNPPDTDEQLAQIREEITADPQKIFQYVRLSQVKQEDKV
CCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCE
IGYRVSPGKSPQLFEAVGLQDGDIAVQLNGNDLTDPAAMGKIFNAVSELTELNLTVERDG
EEEEECCCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCEEEEECCC
QQHDIYIQF
CCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]