| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is pagO [H]
Identifier: 326423776
GI number: 326423776
Start: 841418
End: 842458
Strand: Reverse
Name: pagO [H]
Synonym: NA
Alternate gene names: 326423776
Gene position: 842458-841418 (Counterclockwise)
Preceding gene: 27364283
Following gene: 27364280
Centisome position: 25.67
GC content: 46.69
Gene sequence:
>1041_bases ATGCCGTGTGAATTAGTCATGCGTGTGAATAGATTACTATTTGCACCACCTAGTGATAGGAATTCAAAAATGAAAACTCA TCGATTTACTTTTGCTGAGTCTCTACCTGCGTTGTTGTTTCTCTCGGTATGTTTAATTTGGGGAACCACATGGTTTGCCA TGGAGATTGCCGTGCAAACTATTCCGCCTATTTTCGCTACTGGGCTACGATTTTTGATTGCCGCCCCTCTGCTGCTCATA CTCGGGCAACGTCTTAGACAGCCACTCTTTTTTCCAAAAGGAAAAATGCATTGGATGTTCATCGTCGCGATTTTTTATTT TGCGATCCCGTTTACCTTGATGATTTTTGGTGAACAGTATATTTCGTCAGGTTTGGCTTCGATTATTTTTGCCACCATGC CTATCGCGGTGATGATCACGTCGAGATGGTTTCTCGGATTGACGTTGCGTCGTTTGCAAACGGCTGGGCTGTTGATCGCC GTACTCAGTTTGGTCCTGATTTTGGCGAAAGAGATGAGTCTGGGCGGAGACGACTATCTACTTGGTTTTCTTGCGCTTGG TGGCGCAGTTGCCATTCATGCCGTGATGTATGTGTGCGTGCAGAAGTATTGCCAAGACATTCCAGTGTTGACGTACAACG CGCTGCCGAGTTTGATGGCATCCATGCTGTTGTTGACGGCATCTTGGATAATTGAAAAGCCGGCGTTTTCAGTCTTCTCT CAAGTGTCGATGTTATCTGTCATTTACTTGGGGGTCTTTGCCAGCGTGGGTGGCATTGTGGCCTATTTCAAACTGGGCCA GGTTTCAACGCCCTTTACCGCTTCGATTTGTTTCTTGTTTTTCCCGTTGATCGCACTGAGTCTTTCTACTTGGATGTCAG GCAACAGTATTTCCTCGACCTCGGTGGTTTTGTTGTTGCCACTACTCGGTGGGATTTTTGTGACCAAAGCAGAACCTCAG TTTTGGGCTCGTTTTGGCCGCAAGCGCATTAAGTCAAAGCCAGTGCTGTGCGAGCGATGTATGAAGGAGCTGAACGTTTA G
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: drug/metabolite transporter (DMT) superfamily permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
NA
Sequences:
>Translated_346_residues MPCELVMRVNRLLFAPPSDRNSKMKTHRFTFAESLPALLFLSVCLIWGTTWFAMEIAVQTIPPIFATGLRFLIAAPLLLI LGQRLRQPLFFPKGKMHWMFIVAIFYFAIPFTLMIFGEQYISSGLASIIFATMPIAVMITSRWFLGLTLRRLQTAGLLIA VLSLVLILAKEMSLGGDDYLLGFLALGGAVAIHAVMYVCVQKYCQDIPVLTYNALPSLMASMLLLTASWIIEKPAFSVFS QVSMLSVIYLGVFASVGGIVAYFKLGQVSTPFTASICFLFFPLIALSLSTWMSGNSISSTSVVLLLPLLGGIFVTKAEPQ FWARFGRKRIKSKPVLCERCMKELNV >Mature_345_residues PCELVMRVNRLLFAPPSDRNSKMKTHRFTFAESLPALLFLSVCLIWGTTWFAMEIAVQTIPPIFATGLRFLIAAPLLLIL GQRLRQPLFFPKGKMHWMFIVAIFYFAIPFTLMIFGEQYISSGLASIIFATMPIAVMITSRWFLGLTLRRLQTAGLLIAV LSLVLILAKEMSLGGDDYLLGFLALGGAVAIHAVMYVCVQKYCQDIPVLTYNALPSLMASMLLLTASWIIEKPAFSVFSQ VSMLSVIYLGVFASVGGIVAYFKLGQVSTPFTASICFLFFPLIALSLSTWMSGNSISSTSVVLLLPLLGGIFVTKAEPQF WARFGRKRIKSKPVLCERCMKELNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 38386; Mature: 38255
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCELVMRVNRLLFAPPSDRNSKMKTHRFTFAESLPALLFLSVCLIWGTTWFAMEIAVQT CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPPIFATGLRFLIAAPLLLILGQRLRQPLFFPKGKMHWMFIVAIFYFAIPFTLMIFGEQY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ISSGLASIIFATMPIAVMITSRWFLGLTLRRLQTAGLLIAVLSLVLILAKEMSLGGDDYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LGFLALGGAVAIHAVMYVCVQKYCQDIPVLTYNALPSLMASMLLLTASWIIEKPAFSVFS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVSMLSVIYLGVFASVGGIVAYFKLGQVSTPFTASICFLFFPLIALSLSTWMSGNSISST HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH SVVLLLPLLGGIFVTKAEPQFWARFGRKRIKSKPVLCERCMKELNV HHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure PCELVMRVNRLLFAPPSDRNSKMKTHRFTFAESLPALLFLSVCLIWGTTWFAMEIAVQT CHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IPPIFATGLRFLIAAPLLLILGQRLRQPLFFPKGKMHWMFIVAIFYFAIPFTLMIFGEQY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ISSGLASIIFATMPIAVMITSRWFLGLTLRRLQTAGLLIAVLSLVLILAKEMSLGGDDYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LGFLALGGAVAIHAVMYVCVQKYCQDIPVLTYNALPSLMASMLLLTASWIIEKPAFSVFS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVSMLSVIYLGVFASVGGIVAYFKLGQVSTPFTASICFLFFPLIALSLSTWMSGNSISST HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH SVVLLLPLLGGIFVTKAEPQFWARFGRKRIKSKPVLCERCMKELNV HHHHHHHHHCCEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9712687; 11677609 [H]