| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is phoR [H]
Identifier: 326423716
GI number: 326423716
Start: 465883
End: 467181
Strand: Reverse
Name: phoR [H]
Synonym: NA
Alternate gene names: 326423716
Gene position: 467181-465883 (Counterclockwise)
Preceding gene: 27363935
Following gene: 27363933
Centisome position: 14.24
GC content: 47.42
Gene sequence:
>1299_bases GTGGTTGAAAGATTAACTTGGAAAAAGCTGGCATGGGAGCTGGCTTTTTTTTACACCCCCTGGGTGATTGTTGGGTGGAT ATTCGGCTATATGCCGTGGCTGCTTTTGGTGGCGACGGCTTTGCAGCTTGGTTGGCATTTACACAATCAGGTACGTTTGT CTGCGTGGCTCTGGGATGAAAAGCGTTTAACGCCGCCATCGGGCAGTGGTAATTGGGAATCGCTGTTTAATGGCCTTTAT CGCTTACAGCAAAGGCAGCGACGCAAGCGTAAAGAACTGACGAATTTGATCCGTCGTTTCCGCAATGGTGCAGAATCGTT GCCGGATGCGGTTGTGGTGTTTCGTGCGGAGGGCAACATTGTCTGGTGTAACAAGCTGGCGCAACATCTATTAGGTTTCC ATTGGCCTGAAGATTCTGGTCAGCCTATTTCTAATCTTCTTCGCACTCCTGACTTTATTAAATATCTCTCTGGTAATGAT TTTTCTGAACCGTTGGAAATGTGCTCGCCGCTAAACGTTGAACGTACGCTGGAACTGCGTATTGTTCCTTATACTGAAGG TGAGCACTTGATGGTGGTGCGTGACGTGACGCAGTTGAAACAGCTAGAAGGCATGCGTCGAAACTTTTTTGCTAATGTTT CCCATGAGTTACGTACGCCAATGACGGTGCTTCAGGGTTATCTCGAAATGACCGAAGACCCGGACATGTTGGTTGGCCCC ATGTGGGGCAAAGCCCATCGTGTGATGACGGAACAGCTGAATCGAATGAACAGTTTAGTGAATCAGTTGTTAACCTTATC CAAGATCGAAGCGTCGCCAATTCATGAGTTGGATGAAGTGGTTGATGTGCCCGCCATGCTGGAAGTGCTAGAGAAAGAAG CGGTAAGTTTGAGTGGTGATAATCAGCACGCCATCTCTTTCCAAGTGGATAAAGCGCTTAAAGTCTATGCCGATGAAGAT CAACTGCGCAGTGCTATTTCGAACCTAGTATACAATGCCGTGAAGTACACACCTGCTGGTGCAAGCGTACAGGTTCGTTG GTATCGCAATAGCAAGGGTGCTTGCCTAGAAGTGGAAGACAGTGGTGATGGTATTGAACCGCAACATATCCATCGTCTAA CGGAGCGTTTTTATCGTGTTGACAAAGCACGCTCTCGTGACACCGGAGGCAGTGGTTTAGGTCTAGCGATTGTAAAACAT GCTTTGACTCATCACGACACTCATTTGGATATCCAAAGTAAAGTTGGCAGTGGCAGTAAGTTTTCATTCGTTTTACCGGC AAAATTGGTGGCGAAATGA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: phosphate regulon sensor kinase PhoR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
NA
Sequences:
>Translated_432_residues MVERLTWKKLAWELAFFYTPWVIVGWIFGYMPWLLLVATALQLGWHLHNQVRLSAWLWDEKRLTPPSGSGNWESLFNGLY RLQQRQRRKRKELTNLIRRFRNGAESLPDAVVVFRAEGNIVWCNKLAQHLLGFHWPEDSGQPISNLLRTPDFIKYLSGND FSEPLEMCSPLNVERTLELRIVPYTEGEHLMVVRDVTQLKQLEGMRRNFFANVSHELRTPMTVLQGYLEMTEDPDMLVGP MWGKAHRVMTEQLNRMNSLVNQLLTLSKIEASPIHELDEVVDVPAMLEVLEKEAVSLSGDNQHAISFQVDKALKVYADED QLRSAISNLVYNAVKYTPAGASVQVRWYRNSKGACLEVEDSGDGIEPQHIHRLTERFYRVDKARSRDTGGSGLGLAIVKH ALTHHDTHLDIQSKVGSGSKFSFVLPAKLVAK >Mature_432_residues MVERLTWKKLAWELAFFYTPWVIVGWIFGYMPWLLLVATALQLGWHLHNQVRLSAWLWDEKRLTPPSGSGNWESLFNGLY RLQQRQRRKRKELTNLIRRFRNGAESLPDAVVVFRAEGNIVWCNKLAQHLLGFHWPEDSGQPISNLLRTPDFIKYLSGND FSEPLEMCSPLNVERTLELRIVPYTEGEHLMVVRDVTQLKQLEGMRRNFFANVSHELRTPMTVLQGYLEMTEDPDMLVGP MWGKAHRVMTEQLNRMNSLVNQLLTLSKIEASPIHELDEVVDVPAMLEVLEKEAVSLSGDNQHAISFQVDKALKVYADED QLRSAISNLVYNAVKYTPAGASVQVRWYRNSKGACLEVEDSGDGIEPQHIHRLTERFYRVDKARSRDTGGSGLGLAIVKH ALTHHDTHLDIQSKVGSGSKFSFVLPAKLVAK
Specific function: Member of the two-component regulatory system phoR/phoB involved in the phosphate regulon genes expression. PhoR may function as a membrane-associated protein kinase that phosphorylates phoB in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=433, Percent_Identity=60.0461893764434, Blast_Score=509, Evalue=1e-145, Organism=Escherichia coli, GI1788393, Length=251, Percent_Identity=29.8804780876494, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1786783, Length=273, Percent_Identity=31.8681318681319, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1788549, Length=365, Percent_Identity=24.6575342465753, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1790346, Length=222, Percent_Identity=30.1801801801802, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI1788713, Length=405, Percent_Identity=23.7037037037037, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789149, Length=229, Percent_Identity=28.3842794759825, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI48994928, Length=373, Percent_Identity=24.6648793565684, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI145693157, Length=348, Percent_Identity=25, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1790436, Length=230, Percent_Identity=26.5217391304348, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1787894, Length=232, Percent_Identity=27.1551724137931, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1789808, Length=249, Percent_Identity=28.5140562248996, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1790551, Length=216, Percent_Identity=29.6296296296296, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1786912, Length=232, Percent_Identity=28.8793103448276, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1789403, Length=231, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1788279, Length=261, Percent_Identity=26.0536398467433, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082128, Length=230, Percent_Identity=25.6521739130435, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI87081816, Length=226, Percent_Identity=27.8761061946903, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1790861, Length=207, Percent_Identity=28.9855072463768, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR021766 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014310 [H]
Pfam domain/function: PF11808 DUF3329; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49407; Mature: 49407
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERLTWKKLAWELAFFYTPWVIVGWIFGYMPWLLLVATALQLGWHLHNQVRLSAWLWDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECC KRLTPPSGSGNWESLFNGLYRLQQRQRRKRKELTNLIRRFRNGAESLPDAVVVFRAEGNI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCCE VWCNKLAQHLLGFHWPEDSGQPISNLLRTPDFIKYLSGNDFSEPLEMCSPLNVERTLELR EEHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCCHHHHCCCCCCCEEEEEE IVPYTEGEHLMVVRDVTQLKQLEGMRRNFFANVSHELRTPMTVLQGYLEMTEDPDMLVGP EEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCCCEEEEC MWGKAHRVMTEQLNRMNSLVNQLLTLSKIEASPIHELDEVVDVPAMLEVLEKEAVSLSGD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCC NQHAISFQVDKALKVYADEDQLRSAISNLVYNAVKYTPAGASVQVRWYRNSKGACLEVED CCEEEEEEECCHHHEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEC SGDGIEPQHIHRLTERFYRVDKARSRDTGGSGLGLAIVKHALTHHDTHLDIQSKVGSGSK CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHCCCCCC FSFVLPAKLVAK EEEECCHHHHCC >Mature Secondary Structure MVERLTWKKLAWELAFFYTPWVIVGWIFGYMPWLLLVATALQLGWHLHNQVRLSAWLWDE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECC KRLTPPSGSGNWESLFNGLYRLQQRQRRKRKELTNLIRRFRNGAESLPDAVVVFRAEGNI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCEEEEEECCCCE VWCNKLAQHLLGFHWPEDSGQPISNLLRTPDFIKYLSGNDFSEPLEMCSPLNVERTLELR EEHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHCCCCCCCHHHHCCCCCCCEEEEEE IVPYTEGEHLMVVRDVTQLKQLEGMRRNFFANVSHELRTPMTVLQGYLEMTEDPDMLVGP EEEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCCCEEEEC MWGKAHRVMTEQLNRMNSLVNQLLTLSKIEASPIHELDEVVDVPAMLEVLEKEAVSLSGD CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCC NQHAISFQVDKALKVYADEDQLRSAISNLVYNAVKYTPAGASVQVRWYRNSKGACLEVED CCEEEEEEECCHHHEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEC SGDGIEPQHIHRLTERFYRVDKARSRDTGGSGLGLAIVKHALTHHDTHLDIQSKVGSGSK CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHCCCCCC FSFVLPAKLVAK EEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3550103; 9278503; 2187152; 8391104 [H]