| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 326423702
Identifier: 326423702
GI number: 326423702
Start: 375640
End: 378201
Strand: Reverse
Name: 326423702
Synonym: NA
Alternate gene names: NA
Gene position: 378201-375640 (Counterclockwise)
Preceding gene: 326423703
Following gene: 326423701
Centisome position: 11.52
GC content: 30.29
Gene sequence:
>2562_bases ATGACTAAAAAATTAATATCAGAAACAATAATTCCTAGAGAATTATATATAGAACGAGACGCAGATAGGCAGATTGAGCA AATAGTCAATGATATGGGGAGACCTGGATACATACTAGTATCTAGACAAATGGGTAAAACAAATTTATTAATCCATACAA AAAGAAAACTTGAAACTGAGAATGATATCTTTGCTTATATAGATCTATCTAATCGTTTTGATACAGCAAGAGAGTGTTTT AGAAGTATAATAGACACAATCATTGAATCTAACTATGAGAAATTGGAAGATATAGAAGAAGAAATAGAAAACAGAAGAAA CAACAGAAAAATACCATCACATAAAGAACATGGATTTGAAATAAGAAAGATACTAAATAAAATTTCTGGAAAACTAATTA TCAACCTTGATGAAATTGATTCCCTTACTTCATCAGATTACTCTGATAAAATATTCGCACATATTAGAAGTGTATATTTC GAGCGAGTAAACTTCCCAGAGTTAAAGCGTTTAACATATGTAATATCTGGTGTTGCCGAACCAAGTGAGATAATAAAAGA TAAATCTATATCACCATTTAACATTGGTCAGAAAATATTCTTAACTGATTTTAGCCTTAGCGAGTTTCGTTTATTTGTCG AGAAGTCAAAATTAGAACTGAACGATATTGTCATTGAGCGTATTTATTATTGGATTCAGGGGAATCCTAGAATGTCATGG GAAGTTTTATCTACTATAGAAGACAAGGTAAAAGCTGGTATAAATATTGATGTTGATTCAATTAACTCTGTAATAAAAGA CCTATATCTTTCAAATTATGATCGACCACCAATAGATCATATAAGAGTTCTTGCATCTGCTGATAAAGATTTACAAAGTG GTTTATTTTCAATGCACTACAATAAACCAGTATCCGATCACATAAGGTCTAAGTTATATTTAGCGGGCATTGCTGCTCCA TCTGAAGCTGACGAATCTGTAGCATTTAAAAATAGAGTAGTTGAAGCAAGTCTATCTGAAACCTGGTTAAGTAGTCTAAG TCTAAATAGTTATGTATCTATTGACTCAACACTAGAACTATTCAATAAAAAAGAATATATAGCCGCTGAAAAGCAGTTTC TGACATTAATTGAGTCTGAAATCAACGATGAAATGTTGGATTTTATTCGTTACAAGCTAGCTGCTTGTACGCTATTTAAT GCTAAATATACTGATACTATTAAGTATTGCAAGTTATTAAAAGACGTAGAAAAAATAGATCAAAGAGAAGTTTCTTGGAT GCTTGGGTTTAGTTTTTTTAAAACAAACTCTATAGAGCCAGCTATCGAAGAGCTATCAATTTTAGTTAGTGGCGAAGAGC TAGATTCATTGAAGTATCGAGCAACAGTAGATTATTGTCTAGCTCTGTTAAAGTCTAATAATAATCATACCGATGAAATA ATACGACTTTGTAAATCAATAATTCAAGAATTATCTATATCAGTTGAAAATGAACCTTTAATTGATATAAAGAATTCAAT TATGGAAGTATTATATATTGCAAGTATGATTCTTCAAGAGCTAGATAATATGAATTCTGAACGGCATATAGATAGTGCAT GTCAGTATGCTGTTGGACTGGATGTTATAGTTCCTTCTATTATGCGATATGAAAAAGATGAAGACTGTGATTTATTTTGG GATTCTATATTCCTAAAGGTTAATGAGAGTGAAAAAATCCACACTTCCAATAAAAATTCCAACCCATACCTATTGAAAGA CACTCATATAAAATCTTTTATAAACCTATCTCAATGTCTTGATGATGATAGATTTTTGGAATATCTAAAATGTATACAAA AAATAATTGAACAATCAGAATCACTAAATATTGACTTTTTCCACAACTTAATCATGTGTCTTGTGCTTGATTTACAAAAT AAGTCTAAAAAGGAAAGGTGGATATCTACGTTAAACTTTATTAAATCATTAGATAGAGAAATTATAGACCCTGAATTTGA ATTTTTGTGCAATAAGTTTTCTACATATTTGGAACCACAGAATGAAGAAGCAAGGTCTTTATACTTTCAAGGTATTCAAA ATTATAGCTCAACACCAGAAATAATCGATGCTGAGATTTTTGAACGTGAAATAATAAGACTATATGATGAAGGTAAAGAT GAACAAGCAATATCGCTATCAGACTTAGTTCATAGCCTAGATGTTCTCTCATCAACCTCAACTAAGGTCATTCTTATAAG AATAATGTACATTAGAATGATTCGTTCAAAAAATACTGATAAAAAGGTATCACTAGCTAAAGAACTCGATAATCTACTAG ATAAAATAACCGTTGAGAACGTTGCTCATGCTAGGCTTAATATGAAAGAAGTAGACAATATACGAAAAAACGTTAAAGGT ATCATAATTAAAAATACACCTATTAAACAGGTGATTCATGAACGAAAATATAAAAGAAATGAGTTAATTTCCGTTCTATA CATTGAAAATGATACTACCGAAGTTGGTAAGTACAAAAAATTCATAAACGACTTAGAAAATGGCAAATGCCGCATCATTT AG
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 853; Mature: 852
Protein sequence:
NA
Sequences:
>Translated_853_residues MTKKLISETIIPRELYIERDADRQIEQIVNDMGRPGYILVSRQMGKTNLLIHTKRKLETENDIFAYIDLSNRFDTARECF RSIIDTIIESNYEKLEDIEEEIENRRNNRKIPSHKEHGFEIRKILNKISGKLIINLDEIDSLTSSDYSDKIFAHIRSVYF ERVNFPELKRLTYVISGVAEPSEIIKDKSISPFNIGQKIFLTDFSLSEFRLFVEKSKLELNDIVIERIYYWIQGNPRMSW EVLSTIEDKVKAGINIDVDSINSVIKDLYLSNYDRPPIDHIRVLASADKDLQSGLFSMHYNKPVSDHIRSKLYLAGIAAP SEADESVAFKNRVVEASLSETWLSSLSLNSYVSIDSTLELFNKKEYIAAEKQFLTLIESEINDEMLDFIRYKLAACTLFN AKYTDTIKYCKLLKDVEKIDQREVSWMLGFSFFKTNSIEPAIEELSILVSGEELDSLKYRATVDYCLALLKSNNNHTDEI IRLCKSIIQELSISVENEPLIDIKNSIMEVLYIASMILQELDNMNSERHIDSACQYAVGLDVIVPSIMRYEKDEDCDLFW DSIFLKVNESEKIHTSNKNSNPYLLKDTHIKSFINLSQCLDDDRFLEYLKCIQKIIEQSESLNIDFFHNLIMCLVLDLQN KSKKERWISTLNFIKSLDREIIDPEFEFLCNKFSTYLEPQNEEARSLYFQGIQNYSSTPEIIDAEIFEREIIRLYDEGKD EQAISLSDLVHSLDVLSSTSTKVILIRIMYIRMIRSKNTDKKVSLAKELDNLLDKITVENVAHARLNMKEVDNIRKNVKG IIIKNTPIKQVIHERKYKRNELISVLYIENDTTEVGKYKKFINDLENGKCRII >Mature_852_residues TKKLISETIIPRELYIERDADRQIEQIVNDMGRPGYILVSRQMGKTNLLIHTKRKLETENDIFAYIDLSNRFDTARECFR SIIDTIIESNYEKLEDIEEEIENRRNNRKIPSHKEHGFEIRKILNKISGKLIINLDEIDSLTSSDYSDKIFAHIRSVYFE RVNFPELKRLTYVISGVAEPSEIIKDKSISPFNIGQKIFLTDFSLSEFRLFVEKSKLELNDIVIERIYYWIQGNPRMSWE VLSTIEDKVKAGINIDVDSINSVIKDLYLSNYDRPPIDHIRVLASADKDLQSGLFSMHYNKPVSDHIRSKLYLAGIAAPS EADESVAFKNRVVEASLSETWLSSLSLNSYVSIDSTLELFNKKEYIAAEKQFLTLIESEINDEMLDFIRYKLAACTLFNA KYTDTIKYCKLLKDVEKIDQREVSWMLGFSFFKTNSIEPAIEELSILVSGEELDSLKYRATVDYCLALLKSNNNHTDEII RLCKSIIQELSISVENEPLIDIKNSIMEVLYIASMILQELDNMNSERHIDSACQYAVGLDVIVPSIMRYEKDEDCDLFWD SIFLKVNESEKIHTSNKNSNPYLLKDTHIKSFINLSQCLDDDRFLEYLKCIQKIIEQSESLNIDFFHNLIMCLVLDLQNK SKKERWISTLNFIKSLDREIIDPEFEFLCNKFSTYLEPQNEEARSLYFQGIQNYSSTPEIIDAEIFEREIIRLYDEGKDE QAISLSDLVHSLDVLSSTSTKVILIRIMYIRMIRSKNTDKKVSLAKELDNLLDKITVENVAHARLNMKEVDNIRKNVKGI IIKNTPIKQVIHERKYKRNELISVLYIENDTTEVGKYKKFINDLENGKCRII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 11 WD repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020472 - InterPro: IPR015943 - InterPro: IPR001680 - InterPro: IPR011046 - InterPro: IPR019782 - InterPro: IPR019775 - InterPro: IPR017986 - InterPro: IPR019781 [H]
Pfam domain/function: PF00400 WD40 [H]
EC number: NA
Molecular weight: Translated: 99247; Mature: 99116
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKLISETIIPRELYIERDADRQIEQIVNDMGRPGYILVSRQMGKTNLLIHTKRKLETE CCHHHHHHHCCCHHHEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEHHHCCCC NDIFAYIDLSNRFDTARECFRSIIDTIIESNYEKLEDIEEEIENRRNNRKIPSHKEHGFE CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHH IRKILNKISGKLIINLDEIDSLTSSDYSDKIFAHIRSVYFERVNFPELKRLTYVISGVAE HHHHHHHCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC PSEIIKDKSISPFNIGQKIFLTDFSLSEFRLFVEKSKLELNDIVIERIYYWIQGNPRMSW HHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH EVLSTIEDKVKAGINIDVDSINSVIKDLYLSNYDRPPIDHIRVLASADKDLQSGLFSMHY HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHCHHHHCC NKPVSDHIRSKLYLAGIAAPSEADESVAFKNRVVEASLSETWLSSLSLNSYVSIDSTLEL CCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHH FNKKEYIAAEKQFLTLIESEINDEMLDFIRYKLAACTLFNAKYTDTIKYCKLLKDVEKID HCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QREVSWMLGFSFFKTNSIEPAIEELSILVSGEELDSLKYRATVDYCLALLKSNNNHTDEI HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH IRLCKSIIQELSISVENEPLIDIKNSIMEVLYIASMILQELDNMNSERHIDSACQYAVGL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DVIVPSIMRYEKDEDCDLFWDSIFLKVNESEKIHTSNKNSNPYLLKDTHIKSFINLSQCL HHHHHHHHHCCCCCCCHHEEEEEEEEECCCCCEECCCCCCCCEEEEHHHHHHHHHHHHHC DDDRFLEYLKCIQKIIEQSESLNIDFFHNLIMCLVLDLQNKSKKERWISTLNFIKSLDRE CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH IIDPEFEFLCNKFSTYLEPQNEEARSLYFQGIQNYSSTPEIIDAEIFEREIIRLYDEGKD HCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC EQAISLSDLVHSLDVLSSTSTKVILIRIMYIRMIRSKNTDKKVSLAKELDNLLDKITVEN CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VAHARLNMKEVDNIRKNVKGIIIKNTPIKQVIHERKYKRNELISVLYIENDTTEVGKYKK HHHHHCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH FINDLENGKCRII HHHHCCCCCEEEC >Mature Secondary Structure TKKLISETIIPRELYIERDADRQIEQIVNDMGRPGYILVSRQMGKTNLLIHTKRKLETE CHHHHHHHCCCHHHEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEHHHCCCC NDIFAYIDLSNRFDTARECFRSIIDTIIESNYEKLEDIEEEIENRRNNRKIPSHKEHGFE CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHH IRKILNKISGKLIINLDEIDSLTSSDYSDKIFAHIRSVYFERVNFPELKRLTYVISGVAE HHHHHHHCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC PSEIIKDKSISPFNIGQKIFLTDFSLSEFRLFVEKSKLELNDIVIERIYYWIQGNPRMSW HHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHH EVLSTIEDKVKAGINIDVDSINSVIKDLYLSNYDRPPIDHIRVLASADKDLQSGLFSMHY HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHCHHHHCC NKPVSDHIRSKLYLAGIAAPSEADESVAFKNRVVEASLSETWLSSLSLNSYVSIDSTLEL CCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHH FNKKEYIAAEKQFLTLIESEINDEMLDFIRYKLAACTLFNAKYTDTIKYCKLLKDVEKID HCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH QREVSWMLGFSFFKTNSIEPAIEELSILVSGEELDSLKYRATVDYCLALLKSNNNHTDEI HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH IRLCKSIIQELSISVENEPLIDIKNSIMEVLYIASMILQELDNMNSERHIDSACQYAVGL HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DVIVPSIMRYEKDEDCDLFWDSIFLKVNESEKIHTSNKNSNPYLLKDTHIKSFINLSQCL HHHHHHHHHCCCCCCCHHEEEEEEEEECCCCCEECCCCCCCCEEEEHHHHHHHHHHHHHC DDDRFLEYLKCIQKIIEQSESLNIDFFHNLIMCLVLDLQNKSKKERWISTLNFIKSLDRE CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH IIDPEFEFLCNKFSTYLEPQNEEARSLYFQGIQNYSSTPEIIDAEIFEREIIRLYDEGKD HCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC EQAISLSDLVHSLDVLSSTSTKVILIRIMYIRMIRSKNTDKKVSLAKELDNLLDKITVEN CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VAHARLNMKEVDNIRKNVKGIIIKNTPIKQVIHERKYKRNELISVLYIENDTTEVGKYKK HHHHHCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHH FINDLENGKCRII HHHHCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]