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The map label for this gene is 27366457

Identifier: 27366457

GI number: 27366457

Start: 3271628

End: 3272074

Strand: Reverse

Name: 27366457

Synonym: VV1_3199

Alternate gene names: NA

Gene position: 3272074-3271628 (Counterclockwise)

Preceding gene: 27366458

Following gene: 27366453

Centisome position: 99.7

GC content: 40.94

Gene sequence:

>447_bases
GTGGAGAACAGAACTGCCTTAGCGAACCAGATCAAGGGATTGACTGCTGAGTACGGTGTTGTATTTCCTATTTCCATTAT
AGCTTTGCGGTGTCATTTACCGAGAGCTCTTGAAGATGCAGAGAATAAGCTTTCTCCAGTAATGAGGAACTTACTGCAAA
CTTTATACTATTACTTTGTCAGCCTTAGCGAAGAGATAGATGCAATGACTCAAAGTGTCACCATATTGAGTCAGCAAAAC
CAAAGATATGAGGTCATTCGGAATATTTCTGATTTTGGGCCGATTTTGACAGCGGCACTGATTAGTGAGGTAGGAGCTGG
AAACCAACTCCAAAATGATCGCCAGTTCTCTGCATGGTGTAGTCTGATTCTTAAACAAAATAGTACAGGCGGAAAAAGTT
GTCTTAGCTCTCTATCGAAAAATGGCAATCGTGAATTAAGAACATGA

Upstream 100 bases:

>100_bases
TGATGCAAGAGCTATTTTCGATGCCTTTTCTATGCCTGACCCTGTTAAATCTATTGATTAACAAGACCTCAAAGCGATAC
GCAGTGTCCTTAAACGTTTG

Downstream 100 bases:

>100_bases
CTTATTCACGGTGCTCACACAGTGGTTCGTTGCGGAACTAACAAAGCGGATGCTATGGAAGACTCATTGCATACTGAGGT
GTGTCGATATATGTTGCGTA

Product: transposase and inactivated derivatives

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MENRTALANQIKGLTAEYGVVFPISIIALRCHLPRALEDAENKLSPVMRNLLQTLYYYFVSLSEEIDAMTQSVTILSQQN
QRYEVIRNISDFGPILTAALISEVGAGNQLQNDRQFSAWCSLILKQNSTGGKSCLSSLSKNGNRELRT

Sequences:

>Translated_148_residues
MENRTALANQIKGLTAEYGVVFPISIIALRCHLPRALEDAENKLSPVMRNLLQTLYYYFVSLSEEIDAMTQSVTILSQQN
QRYEVIRNISDFGPILTAALISEVGAGNQLQNDRQFSAWCSLILKQNSTGGKSCLSSLSKNGNRELRT
>Mature_148_residues
MENRTALANQIKGLTAEYGVVFPISIIALRCHLPRALEDAENKLSPVMRNLLQTLYYYFVSLSEEIDAMTQSVTILSQQN
QRYEVIRNISDFGPILTAALISEVGAGNQLQNDRQFSAWCSLILKQNSTGGKSCLSSLSKNGNRELRT

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 16485; Mature: 16485

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENRTALANQIKGLTAEYGVVFPISIIALRCHLPRALEDAENKLSPVMRNLLQTLYYYFV
CCCHHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLSEEIDAMTQSVTILSQQNQRYEVIRNISDFGPILTAALISEVGAGNQLQNDRQFSAWC
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
SLILKQNSTGGKSCLSSLSKNGNRELRT
HHHHHCCCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MENRTALANQIKGLTAEYGVVFPISIIALRCHLPRALEDAENKLSPVMRNLLQTLYYYFV
CCCHHHHHHHHHCCHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLSEEIDAMTQSVTILSQQNQRYEVIRNISDFGPILTAALISEVGAGNQLQNDRQFSAWC
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
SLILKQNSTGGKSCLSSLSKNGNRELRT
HHHHHCCCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1324903; 12704232 [H]