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The map label for this gene is 27366452

Identifier: 27366452

GI number: 27366452

Start: 3266552

End: 3266929

Strand: Reverse

Name: 27366452

Synonym: VV1_3193

Alternate gene names: NA

Gene position: 3266929-3266552 (Counterclockwise)

Preceding gene: 27366453

Following gene: 27366451

Centisome position: 99.54

GC content: 45.77

Gene sequence:

>378_bases
ATGATTCTAAGGTTACCTGACCGCGCTGAGCGACGTCGTATCACTAAAAAGATGCATAAGACTAAGGATAAAGACCATTA
CCGACACTTGAATGCCATATTGCTTCTTTCTCAAGGTAGAGCCGCGACGCTCCCATTTCTTCAAATTGCCGCTGTATTGA
CTGCTTTACTCGCACTGAATCCTCAAAGTCTTGGATATCAACGTTCACGTTGGAGAACTGAGTCGATGGCGATTGAGGTG
AATCGGATATTTGGGTTTAACGCGCACTCATCGACCATTCGTCGATGGGGGCCTAAACTTGGGATTGTCTGGCGAAGAGC
CTGCATATCAAAGATCCAGATAAAGAAGCCAAACTCACCAGAATCAAAGAGGCATTAG

Upstream 100 bases:

>100_bases
ATGTAGATCACTGGTATGTAAAAAAGAAGGGAACTCGGTACCGTTTGAGCGATCTGATCAGTCACCAAACATACAAACCC
GCAACCGTTACCGAGTTTCC

Downstream 100 bases:

>100_bases
CGCGTTGCGACGCTGACAATCCGGTGTTTTATGAAGACGAAGTCGACATTCACTTAAACCGCAAAATTGGGTCAGATTGG
ATGCCCAAAGGTCAACAAAA

Product: putative transposase and inactivated derivative

Products: NA

Alternate protein names: ISO-IS200 39 kDa protein [H]

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MILRLPDRAERRRITKKMHKTKDKDHYRHLNAILLLSQGRAATLPFLQIAAVLTALLALNPQSLGYQRSRWRTESMAIEV
NRIFGFNAHSSTIRRWGPKLGIVWRRACISKIQIKKPNSPESKRH

Sequences:

>Translated_125_residues
MILRLPDRAERRRITKKMHKTKDKDHYRHLNAILLLSQGRAATLPFLQIAAVLTALLALNPQSLGYQRSRWRTESMAIEV
NRIFGFNAHSSTIRRWGPKLGIVWRRACISKIQIKKPNSPESKRH
>Mature_125_residues
MILRLPDRAERRRITKKMHKTKDKDHYRHLNAILLLSQGRAATLPFLQIAAVLTALLALNPQSLGYQRSRWRTESMAIEV
NRIFGFNAHSSTIRRWGPKLGIVWRRACISKIQIKKPNSPESKRH

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 14547; Mature: 14547

Theoretical pI: Translated: 12.21; Mature: 12.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILRLPDRAERRRITKKMHKTKDKDHYRHLNAILLLSQGRAATLPFLQIAAVLTALLALN
CEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCC
PQSLGYQRSRWRTESMAIEVNRIFGFNAHSSTIRRWGPKLGIVWRRACISKIQIKKPNSP
CHHCCCCHHHCCCHHHEEEEHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
ESKRH
CCCCC
>Mature Secondary Structure
MILRLPDRAERRRITKKMHKTKDKDHYRHLNAILLLSQGRAATLPFLQIAAVLTALLALN
CEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCC
PQSLGYQRSRWRTESMAIEVNRIFGFNAHSSTIRRWGPKLGIVWRRACISKIQIKKPNSP
CHHCCCCHHHCCCHHHEEEEHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
ESKRH
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2824781 [H]