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The map label for this gene is ylaB [H]

Identifier: 27366325

GI number: 27366325

Start: 3127007

End: 3129103

Strand: Reverse

Name: ylaB [H]

Synonym: VV1_3056

Alternate gene names: 27366325

Gene position: 3129103-3127007 (Counterclockwise)

Preceding gene: 27366326

Following gene: 27366323

Centisome position: 95.35

GC content: 46.83

Gene sequence:

>2097_bases
ATGGAAAAGCAGGCAAGCTTATCGTGGACGGTCGTTGGCATCAATTTGAAGAAGGTGAGCAAACGACTCGCCCCATCATT
GCAGGCAATTCGCGAAGGGATGATTTGGCTGATTCCCTGTTTGATGTTATCGGCTTTTGCGCTGTTCTTTGCCAGTATGG
GGGAGTTTGTTGGCGGTGGTCGAAGTGGCTGGATCAATGCACTGTATGATGTGCATAACGCGATTGCGGCGTTTTTTCCC
TATCTTATGACGGCGACCATCTCTTATGTGCTGGCGATGCAATGGAAATTAGCTCGCCCACCGATGGCCCTACTTTCGAT
TATTTTTCTCCTTATTGTTGGTCATGTCGTACCCGCTGATGACACGTTGAAAATGTTTCACATCGTCATTGCGATTGTGA
CGCCGCTGTACGCGATTCCTATCTTGGCGCATTTGCTGCACGTGCCTCAATTGCGCATCACCAACTCCGACAGTGGAGGT
AAGCTGGTCAAAGAATCGTTGAATCTTGTTTTACCCGCACTGCTAACTGCGTTTATTGTCGTGGTGATTAATTACTTAAT
ATTCAGCATGATCAGCTTTGGTGATGGGTTGAAATTAGTACAACTCGATTATGCCAATGAGCCGTATGAGTTTGGTATCA
CCTTTGCCGCGATGAACTCGTTGTTATGGTTCCTCGGTGTTCACGGTTACTACGCACTGTTGCCACTGGTTGAGCTGTTA
CAGCAAGCAAGTTCGTTGAACTATTCCACCTTTGTCGCCGGAGGTGAAGGACATTATGCGATGAACCTTTCCATGATGGG
GACCTTTGTCTTCATTGGAGGGAGCGGAGCAACACTGTCATTAGTCATCGCCATGTTATTGTTTGCGAAGCAGAAAAGTC
TCAAATTAATAGCGATCGCCTCTATCCCTATTGGCTTAATTAACGTCAATGAAATTTTGCTGTTTGGTCTGCCCATTATT
TTGAATCCACGTATGTTTTTACCGTTTTTTTTAACACCGGCGGTGCACGTGGTGACGACCTTGCTTGCGATTGAAGTCGG
TGTTATCAACGTGCCAAGCGCAAGTGTGCCTTTTAATGCGCCAATTATTATTAACGCGTGGTTAGCAACATCTGGTGACT
GGGGTGGGGTGCTGCTGCAACTCTTTAACATTGCCGTTGGTGTGGTGATCTACTATCCATCGGTGAGAAACCTCAATCGG
TTGTACAGCAATCGCGAAATCAAAATTGATTTTCTTGATACGGTGTACGTGAGACGCAGAGAAGAAGCGGACACATTAAA
AGATGACCCCATTGCGACTGCAAATGATCGCGCTCGCCGTGCTCAGGAAGTTGAACAACGATTAGAGCACATTGGTAGCA
AAGAGTTTTGCCTGGAATATCAACCGCAAGTTTCTCATCAAACCGGCCGTGTGGTTGGTTGTGAAGCGTTAATTCGAGCT
ATCGAACCCGATGGCACGCTGGTGTATCCCGGTACGTTCTTGCCATGGCTCGAAGAAGCGGGCTTGATGAAAGATGTGGA
TCTTTGGGTGCTGAAAACGGTCGCAAAAGACATTCAAGAGTGGAACCGCATTGGCTTGTATGTGCCTGTTAGCATCAACC
TTACCCCTGCTTTTCTTGCTGACCAAGAGTGTATGGATAAACTGGAATACATTTTGGCTCCTGTCGCGTCACAAGTACAC
ATTGAAATCACCGAAGAGACGTTGCTGGTGGATGAGCAGGTACTGGCGCGTTCTTTTAACCTGCTACATCAATTGGGCGT
AGCGGTGTATATTGATGACTTTGGGACGGGTTTCTCCTCGTTGTCTTACCTCAATCGATTTGAAGTCGACGCGATTAAAG
TCGATCGTTCCTTTGTTTTGGCACTTGATAACGAGAAAGGAAAAAAAGTGTTCATGAGCCTTCTTTCTGTGGCCGAGCAA
CTGGGACTAGAAGTGGTTATTGAAGGGGTTGAATCGCAACAGCAATTGAACCACATTCCCGCGAAAGAGCACATCTCGAT
ACAGGGCTGGTATTACAGCCGTTCATTGCAACACAACTCATTTATCCAATACTGCATCAACGCCAACCGACTCACTCCAG
TCGTGGAAGTGGATTAG

Upstream 100 bases:

>100_bases
AATCATACCGTTCTCAATTGATGATTTAGTGATTACTAATGTAGTCTATCTGCTGTTCTGTGCTAACTTTAAAAGGTGAA
GGCGATTACAGGATCAGCAC

Downstream 100 bases:

>100_bases
AAAAGACCTAATTGCGCATCGGCTAACTGGCTAAAGTCTTTACCAATAAAAGGTAGAATGGCATCGGCAACCGGTTTGAG
CTGTTTATCGACATAATGTT

Product: EAL domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 698; Mature: 698

Protein sequence:

>698_residues
MEKQASLSWTVVGINLKKVSKRLAPSLQAIREGMIWLIPCLMLSAFALFFASMGEFVGGGRSGWINALYDVHNAIAAFFP
YLMTATISYVLAMQWKLARPPMALLSIIFLLIVGHVVPADDTLKMFHIVIAIVTPLYAIPILAHLLHVPQLRITNSDSGG
KLVKESLNLVLPALLTAFIVVVINYLIFSMISFGDGLKLVQLDYANEPYEFGITFAAMNSLLWFLGVHGYYALLPLVELL
QQASSLNYSTFVAGGEGHYAMNLSMMGTFVFIGGSGATLSLVIAMLLFAKQKSLKLIAIASIPIGLINVNEILLFGLPII
LNPRMFLPFFLTPAVHVVTTLLAIEVGVINVPSASVPFNAPIIINAWLATSGDWGGVLLQLFNIAVGVVIYYPSVRNLNR
LYSNREIKIDFLDTVYVRRREEADTLKDDPIATANDRARRAQEVEQRLEHIGSKEFCLEYQPQVSHQTGRVVGCEALIRA
IEPDGTLVYPGTFLPWLEEAGLMKDVDLWVLKTVAKDIQEWNRIGLYVPVSINLTPAFLADQECMDKLEYILAPVASQVH
IEITEETLLVDEQVLARSFNLLHQLGVAVYIDDFGTGFSSLSYLNRFEVDAIKVDRSFVLALDNEKGKKVFMSLLSVAEQ
LGLEVVIEGVESQQQLNHIPAKEHISIQGWYYSRSLQHNSFIQYCINANRLTPVVEVD

Sequences:

>Translated_698_residues
MEKQASLSWTVVGINLKKVSKRLAPSLQAIREGMIWLIPCLMLSAFALFFASMGEFVGGGRSGWINALYDVHNAIAAFFP
YLMTATISYVLAMQWKLARPPMALLSIIFLLIVGHVVPADDTLKMFHIVIAIVTPLYAIPILAHLLHVPQLRITNSDSGG
KLVKESLNLVLPALLTAFIVVVINYLIFSMISFGDGLKLVQLDYANEPYEFGITFAAMNSLLWFLGVHGYYALLPLVELL
QQASSLNYSTFVAGGEGHYAMNLSMMGTFVFIGGSGATLSLVIAMLLFAKQKSLKLIAIASIPIGLINVNEILLFGLPII
LNPRMFLPFFLTPAVHVVTTLLAIEVGVINVPSASVPFNAPIIINAWLATSGDWGGVLLQLFNIAVGVVIYYPSVRNLNR
LYSNREIKIDFLDTVYVRRREEADTLKDDPIATANDRARRAQEVEQRLEHIGSKEFCLEYQPQVSHQTGRVVGCEALIRA
IEPDGTLVYPGTFLPWLEEAGLMKDVDLWVLKTVAKDIQEWNRIGLYVPVSINLTPAFLADQECMDKLEYILAPVASQVH
IEITEETLLVDEQVLARSFNLLHQLGVAVYIDDFGTGFSSLSYLNRFEVDAIKVDRSFVLALDNEKGKKVFMSLLSVAEQ
LGLEVVIEGVESQQQLNHIPAKEHISIQGWYYSRSLQHNSFIQYCINANRLTPVVEVD
>Mature_698_residues
MEKQASLSWTVVGINLKKVSKRLAPSLQAIREGMIWLIPCLMLSAFALFFASMGEFVGGGRSGWINALYDVHNAIAAFFP
YLMTATISYVLAMQWKLARPPMALLSIIFLLIVGHVVPADDTLKMFHIVIAIVTPLYAIPILAHLLHVPQLRITNSDSGG
KLVKESLNLVLPALLTAFIVVVINYLIFSMISFGDGLKLVQLDYANEPYEFGITFAAMNSLLWFLGVHGYYALLPLVELL
QQASSLNYSTFVAGGEGHYAMNLSMMGTFVFIGGSGATLSLVIAMLLFAKQKSLKLIAIASIPIGLINVNEILLFGLPII
LNPRMFLPFFLTPAVHVVTTLLAIEVGVINVPSASVPFNAPIIINAWLATSGDWGGVLLQLFNIAVGVVIYYPSVRNLNR
LYSNREIKIDFLDTVYVRRREEADTLKDDPIATANDRARRAQEVEQRLEHIGSKEFCLEYQPQVSHQTGRVVGCEALIRA
IEPDGTLVYPGTFLPWLEEAGLMKDVDLWVLKTVAKDIQEWNRIGLYVPVSINLTPAFLADQECMDKLEYILAPVASQVH
IEITEETLLVDEQVLARSFNLLHQLGVAVYIDDFGTGFSSLSYLNRFEVDAIKVDRSFVLALDNEKGKKVFMSLLSVAEQ
LGLEVVIEGVESQQQLNHIPAKEHISIQGWYYSRSLQHNSFIQYCINANRLTPVVEVD

Specific function: Unknown

COG id: COG1455

COG function: function code G; Phosphotransferase system cellobiose-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081743, Length=253, Percent_Identity=33.596837944664, Blast_Score=139, Evalue=8e-34,
Organism=Escherichia coli, GI87081921, Length=233, Percent_Identity=31.3304721030043, Blast_Score=123, Evalue=4e-29,
Organism=Escherichia coli, GI1787541, Length=207, Percent_Identity=32.8502415458937, Blast_Score=123, Evalue=5e-29,
Organism=Escherichia coli, GI87081845, Length=270, Percent_Identity=29.2592592592593, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1788502, Length=253, Percent_Identity=30.8300395256917, Blast_Score=120, Evalue=4e-28,
Organism=Escherichia coli, GI1790496, Length=236, Percent_Identity=29.2372881355932, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1788032, Length=256, Percent_Identity=29.6875, Blast_Score=112, Evalue=6e-26,
Organism=Escherichia coli, GI226510982, Length=305, Percent_Identity=27.5409836065574, Blast_Score=106, Evalue=6e-24,
Organism=Escherichia coli, GI1786507, Length=238, Percent_Identity=31.9327731092437, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI87081980, Length=237, Percent_Identity=27.8481012658228, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI1788849, Length=225, Percent_Identity=28.8888888888889, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI87082096, Length=204, Percent_Identity=29.4117647058824, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1787055, Length=228, Percent_Identity=26.7543859649123, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 77507; Mature: 77507

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS51105 PTS_EIIC_TYPE_3 ; PS50883 EAL ; PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQASLSWTVVGINLKKVSKRLAPSLQAIREGMIWLIPCLMLSAFALFFASMGEFVGGG
CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC
RSGWINALYDVHNAIAAFFPYLMTATISYVLAMQWKLARPPMALLSIIFLLIVGHVVPAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
DTLKMFHIVIAIVTPLYAIPILAHLLHVPQLRITNSDSGGKLVKESLNLVLPALLTAFIV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VVINYLIFSMISFGDGLKLVQLDYANEPYEFGITFAAMNSLLWFLGVHGYYALLPLVELL
HHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQASSLNYSTFVAGGEGHYAMNLSMMGTFVFIGGSGATLSLVIAMLLFAKQKSLKLIAIA
HHHHCCCCEEEEECCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEE
SIPIGLINVNEILLFGLPIILNPRMFLPFFLTPAVHVVTTLLAIEVGVINVPSASVPFNA
ECCEEEEEHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCC
PIIINAWLATSGDWGGVLLQLFNIAVGVVIYYPSVRNLNRLYSNREIKIDFLDTVYVRRR
CEEEEEEEECCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCCEEEEEHHHHHHHHC
EEADTLKDDPIATANDRARRAQEVEQRLEHIGSKEFCLEYQPQVSHQTGRVVGCEALIRA
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEHHHHHHH
IEPDGTLVYPGTFLPWLEEAGLMKDVDLWVLKTVAKDIQEWNRIGLYVPVSINLTPAFLA
CCCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCHHHHC
DQECMDKLEYILAPVASQVHIEITEETLLVDEQVLARSFNLLHQLGVAVYIDDFGTGFSS
CHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHH
LSYLNRFEVDAIKVDRSFVLALDNEKGKKVFMSLLSVAEQLGLEVVIEGVESQQQLNHIP
HHHHHHCCCEEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHCCC
AKEHISIQGWYYSRSLQHNSFIQYCINANRLTPVVEVD
CCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MEKQASLSWTVVGINLKKVSKRLAPSLQAIREGMIWLIPCLMLSAFALFFASMGEFVGGG
CCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCC
RSGWINALYDVHNAIAAFFPYLMTATISYVLAMQWKLARPPMALLSIIFLLIVGHVVPAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
DTLKMFHIVIAIVTPLYAIPILAHLLHVPQLRITNSDSGGKLVKESLNLVLPALLTAFIV
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
VVINYLIFSMISFGDGLKLVQLDYANEPYEFGITFAAMNSLLWFLGVHGYYALLPLVELL
HHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQASSLNYSTFVAGGEGHYAMNLSMMGTFVFIGGSGATLSLVIAMLLFAKQKSLKLIAIA
HHHHCCCCEEEEECCCCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEE
SIPIGLINVNEILLFGLPIILNPRMFLPFFLTPAVHVVTTLLAIEVGVINVPSASVPFNA
ECCEEEEEHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCC
PIIINAWLATSGDWGGVLLQLFNIAVGVVIYYPSVRNLNRLYSNREIKIDFLDTVYVRRR
CEEEEEEEECCCCHHHHHHHHHHHHHHHHEEECCHHHHHHHHCCCCEEEEEHHHHHHHHC
EEADTLKDDPIATANDRARRAQEVEQRLEHIGSKEFCLEYQPQVSHQTGRVVGCEALIRA
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEHHHHHHH
IEPDGTLVYPGTFLPWLEEAGLMKDVDLWVLKTVAKDIQEWNRIGLYVPVSINLTPAFLA
CCCCCCEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEEEEECCHHHHC
DQECMDKLEYILAPVASQVHIEITEETLLVDEQVLARSFNLLHQLGVAVYIDDFGTGFSS
CHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHH
LSYLNRFEVDAIKVDRSFVLALDNEKGKKVFMSLLSVAEQLGLEVVIEGVESQQQLNHIP
HHHHHHCCCEEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHCCC
AKEHISIQGWYYSRSLQHNSFIQYCINANRLTPVVEVD
CCCCEEEEEEEEECCCCCCHHHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]