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The map label for this gene is nspC

Identifier: 27366317

GI number: 27366317

Start: 3114595

End: 3115728

Strand: Reverse

Name: nspC

Synonym: VV1_3048

Alternate gene names: NA

Gene position: 3115728-3114595 (Counterclockwise)

Preceding gene: 27366318

Following gene: 326424123

Centisome position: 94.94

GC content: 46.3

Gene sequence:

>1134_bases
ATGAACAAAGAGCAATTGAAAACACCATTTTTCATGATTGACGAAGCAAAGTTGATCCAAAATCTAGAGATTGCTAAGCA
GTTAAAAGAAATTTCTGGGGTTAAGTTGGTATTGGCACTGAAGTGCTTTTCTACTTGGGGTGTATTCGACATCATCAAAC
CTTACCTAGACGGTACGACGAGCTCAGGGCCGTTCGAAGTGAAGCTAGGTTATGAAAAGTTTGGTGGCGAAACGCACGCT
TACAGTGTGGGTTATAGCGAAGATGATGTTCGTGAAGTCGCGGATCTGTGCGATAAAATCATTTTCAACTCACAGTCTCA
GCTGGCAGCGCACCGTCATATCGTTGAAGGCAAAGCGTCTATCGGTCTGCGTTTGAACCCAGGTGTGAGTTACGCAAGCC
AAGATTTAGCAAACCCTGCTCGCCAGTTCTCACGTTTGGGTGTACAGGCTGACCATATTGATCCGGCGGTATTCGATAGC
ATTAATGGCGTGATGTTCCACATGAACTGTGAGAACAAAGATGTGGACGCCTTCATCGCGCTACTGGATTCCATCTCTGA
GCGTTTCGGTGCTTATCTCAACAAACTTGATTGGGTCAGCATGGGCGGAGGCGTGTTCTTCACGTGGCCAGGTTACGATG
TAGAAAAGCTGGGTCTAGCGCTGAAAGCGTTCTCTGAGAAGCACGGCGTACAGATGTATTTAGAGCCAGGTGAAGCGATC
ATCACTAAAACCACCGATTTGGTTGTGACCGTGGTGGATTTGGTTGAAAACGGCATGAAAACGGCAATCGTAGATTCTGC
AACAGAAGCACACCGCCTTGATACGCTGATCTACAAAGAACCTGCATCAGTGCTTGAAGCATCAGAAAATGGTGAACATG
AGTACGTGATTGGTTCTTGTTCATGTTTGGCAGGTGACCAATTCTGTGTGGCTAAGTTTGACCAGCCTCTGCACGTTGGC
CAGCGTCTGCACATTCTTGATAGTGCAGGTTACACTATGGTGAAACTGAACTGGTTCAACGGTCTGAAGATGCCTTCCGT
ATACTGTGAGCGCACCAATGGTGAGATTCAAAAACTCAACGAGTTTGGTTACGAAGATTTCAAACGTAGTTTATCACTAT
GGTCGGTACAGTAA

Upstream 100 bases:

>100_bases
AACGATTCATACACTGAAGTAAGCCTTTCGCTGTATTATTCAGTCCTATCTTCAAGCCGGTGCGTTGCACCGGCTTTGTT
CAGTTAAAGTGATGATAAAT

Downstream 100 bases:

>100_bases
GTTCGGCTATATAGATAAGAGCAGCCAGTTGGCTGCTCTTTTTGTTTGTTAAGACTCGATAATCACGCGAGTGTCTTCAC
TCAAGGATTCTAGCTCGTTG

Product: carboxynorspermidine decarboxylase

Products: NA

Alternate protein names: Carboxynorspermidine Decarboxylase NspC; Diaminopimelate Decarboxylase; Pyridoxal-Dependent Decarboxylase NspC; LOW QUALITY PROTEIN Orn/DAP/Arg Decarboxylase; Carboxynorspermidine/Carboxyspermidine Decarboxylase; Pyridoxal-Dependent Decarboxylase; Carboxynorspermide Decarboxylase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MNKEQLKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPFEVKLGYEKFGGETHA
YSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVEGKASIGLRLNPGVSYASQDLANPARQFSRLGVQADHIDPAVFDS
INGVMFHMNCENKDVDAFIALLDSISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEPGEAI
ITKTTDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYVIGSCSCLAGDQFCVAKFDQPLHVG
QRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEIQKLNEFGYEDFKRSLSLWSVQ

Sequences:

>Translated_377_residues
MNKEQLKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPFEVKLGYEKFGGETHA
YSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVEGKASIGLRLNPGVSYASQDLANPARQFSRLGVQADHIDPAVFDS
INGVMFHMNCENKDVDAFIALLDSISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEPGEAI
ITKTTDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYVIGSCSCLAGDQFCVAKFDQPLHVG
QRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEIQKLNEFGYEDFKRSLSLWSVQ
>Mature_377_residues
MNKEQLKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPFEVKLGYEKFGGETHA
YSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVEGKASIGLRLNPGVSYASQDLANPARQFSRLGVQADHIDPAVFDS
INGVMFHMNCENKDVDAFIALLDSISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEPGEAI
ITKTTDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYVIGSCSCLAGDQFCVAKFDQPLHVG
QRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEIQKLNEFGYEDFKRSLSLWSVQ

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41912; Mature: 41912

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKEQLKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTT
CCHHHHCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCHHHHHHHHHCCCC
SSGPFEVKLGYEKFGGETHAYSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVEGKAS
CCCCEEEEECHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCE
IGLRLNPGVSYASQDLANPARQFSRLGVQADHIDPAVFDSINGVMFHMNCENKDVDAFIA
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHH
LLDSISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEPGEAI
HHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCEE
ITKTTDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYVIGSC
EEEHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEE
SCLAGDQFCVAKFDQPLHVGQRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEIQKLN
EEECCCCEEEECCCCCHHCCCEEEEEECCCCEEEEEEECCCCCCCCCEEECCCCHHHHHH
EFGYEDFKRSLSLWSVQ
HCCHHHHHHCHHHCCCC
>Mature Secondary Structure
MNKEQLKTPFFMIDEAKLIQNLEIAKQLKEISGVKLVLALKCFSTWGVFDIIKPYLDGTT
CCHHHHCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCHHHHHHHHHCCCC
SSGPFEVKLGYEKFGGETHAYSVGYSEDDVREVADLCDKIIFNSQSQLAAHRHIVEGKAS
CCCCEEEEECHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCE
IGLRLNPGVSYASQDLANPARQFSRLGVQADHIDPAVFDSINGVMFHMNCENKDVDAFIA
EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEECCCCCHHHHHH
LLDSISERFGAYLNKLDWVSMGGGVFFTWPGYDVEKLGLALKAFSEKHGVQMYLEPGEAI
HHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCCEE
ITKTTDLVVTVVDLVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASENGEHEYVIGSC
EEEHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCHHHHHCCCCCCCEEEEEEE
SCLAGDQFCVAKFDQPLHVGQRLHILDSAGYTMVKLNWFNGLKMPSVYCERTNGEIQKLN
EEECCCCEEEECCCCCHHCCCEEEEEECCCCEEEEEEECCCCCCCCCEEECCCCHHHHHH
EFGYEDFKRSLSLWSVQ
HCCHHHHHHCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA