| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
Click here to switch to the map view.
The map label for this gene is 27366211
Identifier: 27366211
GI number: 27366211
Start: 2999224
End: 3000516
Strand: Reverse
Name: 27366211
Synonym: VV1_2934
Alternate gene names: NA
Gene position: 3000516-2999224 (Counterclockwise)
Preceding gene: 27366212
Following gene: 326424101
Centisome position: 91.43
GC content: 46.87
Gene sequence:
>1293_bases ATGAAAATTGCAATAATAGGTACAGGCATCTCCGGATTAACATGTGGCTACCATCTGCACAAAGCGCATGACATTACACT GTTTGAAGCCAATGATTACATTGGAGGGCATACGGCGACGATCGATTTTGCACTCAACGGTAAAGACTACTCAGTCGATA CGGGGTTCATCGTCTATAACGATCGAACCTACCCCAATTTCATCAATATGATGGATGAAATTGGCGTGACTGGGCGTGCA ACCCAAATGAGCTTTAGTGTTCGCAATGACAGCAATGGACTTGAGTACAATGGCCACACGCTGGCGACACTGTTTGCTCA AAAAAGGAACTGGTTTAAACCGCAGTTCTACGGTTTTATTTTTGAAATCCTGCGCTTTAACAAACTGGCAAAAGCGTCTG CGCACCATGACCACATTGCCCAACAAACACTTGGGGAGTTCTTAGATACGCATGGCTTTAGTGACTATTTTAGCGACAAC TATATCTTGCCAATGGGGGCTGCGATTTGGTCATCGACCTTAGCGGATATGCGTGCTTTCCCTCTTACGTTTTTTCTACG TTTCTTTCTCAATCATGGCCTTCTTGATGTTACCAACCGACCACAGTGGTACGTGATTGATGGTGGCTCAAAAGCTTACA TCCCGCCATTAACGAAGGGCTTCTCTGATCGTATTCGTTTGAACTGTCCAGTTGAAAAAGTGATCCGCGACTCAACGGGT GTCACATTATATGTTGCAGGAGCAGCACAACGTTTTGATCACGTTATTTTTGCCTGTCACAGCGATCAAGCGAGGTCGCT ATTGGAGGATGCTTCCTGTGATGAAGCCTCGATTTTGTCGCGTATGGCATATCAAGCCAACGAGGTTGTTTTGCATACAG ATGACAGCTTGCTGCCTCGCAGAAAGGCTGCGTGGGCATCGTGGAACTATTTACTCGATGGTAAGGAAGGAGAAGACACA CGCTTACCTTCGTTAACCTACAACATGAACATTCTCCAGCACATTGAAGCAGAACATACGTTTTGCGTGACGCTCAATAG CAGCGACAAGATAGACGAAGACAAAGTTATCCGTAAGTTTGTTTACCACCATCCGGTATTTACCACAGAGTCGATCGCGG CACAGCAGAGACGAGATGACATTCAAGGGCGAAATCACACATGGTTTTGCGGTGCGTATTGGTACAACGGATTCCATGAA GATGGCGTTCGCAGCGCCTTGGATGTGGTGCGAGGCATCAACCTTGTGCACGCGAAAGAAGAGGCGACTTCTTTTCACCA AGGGGCGGCGTGA
Upstream 100 bases:
>100_bases CGGTTTACCGCTCTTATTCGGTTACTTGCGTTACTGCCTTACCGTTGGCAGAAGGCGTTAGCTTCAAAATTAATTGCCCA ATAAATTCAAAGGATAATGT
Downstream 100 bases:
>100_bases ACATGGCCATCAGTAGTCGTCTGTTTGTGGGTAATGTTCGGCACCGCCGCTTTACCCCAGTAGAGCATAGTTTGAATTAT CAATTGTTCATGCCAGCGAT
Product: amine oxidase, flavin-containing
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Amine Oxidase Flavin-Containing; Dehydrogenase; Amine Oxidoreductase; Flavin Containing Amine Oxidoreductase; Flavin-Containing Amine Oxidase; Amino-Oxidase; Oxidoreductase; Amine Oxidase Flavin-Containing Superfamily; FAD-Dependent Oxidoreductase; Amino Oxidase; Flavin Containing Amine Oxidoreductase Protein; Amine Oxidase Flavin-Containing Protein; Amine Oxidase Protein; Amine OxidaseFAD Dependent Oxidoreductase; Amine-Oxidase; Fad Dependent Oxidoreductase; Flavin Containing Amine Oxidoreductas; Lipoprotein
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKIAIIGTGISGLTCGYHLHKAHDITLFEANDYIGGHTATIDFALNGKDYSVDTGFIVYNDRTYPNFINMMDEIGVTGRA TQMSFSVRNDSNGLEYNGHTLATLFAQKRNWFKPQFYGFIFEILRFNKLAKASAHHDHIAQQTLGEFLDTHGFSDYFSDN YILPMGAAIWSSTLADMRAFPLTFFLRFFLNHGLLDVTNRPQWYVIDGGSKAYIPPLTKGFSDRIRLNCPVEKVIRDSTG VTLYVAGAAQRFDHVIFACHSDQARSLLEDASCDEASILSRMAYQANEVVLHTDDSLLPRRKAAWASWNYLLDGKEGEDT RLPSLTYNMNILQHIEAEHTFCVTLNSSDKIDEDKVIRKFVYHHPVFTTESIAAQQRRDDIQGRNHTWFCGAYWYNGFHE DGVRSALDVVRGINLVHAKEEATSFHQGAA
Sequences:
>Translated_430_residues MKIAIIGTGISGLTCGYHLHKAHDITLFEANDYIGGHTATIDFALNGKDYSVDTGFIVYNDRTYPNFINMMDEIGVTGRA TQMSFSVRNDSNGLEYNGHTLATLFAQKRNWFKPQFYGFIFEILRFNKLAKASAHHDHIAQQTLGEFLDTHGFSDYFSDN YILPMGAAIWSSTLADMRAFPLTFFLRFFLNHGLLDVTNRPQWYVIDGGSKAYIPPLTKGFSDRIRLNCPVEKVIRDSTG VTLYVAGAAQRFDHVIFACHSDQARSLLEDASCDEASILSRMAYQANEVVLHTDDSLLPRRKAAWASWNYLLDGKEGEDT RLPSLTYNMNILQHIEAEHTFCVTLNSSDKIDEDKVIRKFVYHHPVFTTESIAAQQRRDDIQGRNHTWFCGAYWYNGFHE DGVRSALDVVRGINLVHAKEEATSFHQGAA >Mature_430_residues MKIAIIGTGISGLTCGYHLHKAHDITLFEANDYIGGHTATIDFALNGKDYSVDTGFIVYNDRTYPNFINMMDEIGVTGRA TQMSFSVRNDSNGLEYNGHTLATLFAQKRNWFKPQFYGFIFEILRFNKLAKASAHHDHIAQQTLGEFLDTHGFSDYFSDN YILPMGAAIWSSTLADMRAFPLTFFLRFFLNHGLLDVTNRPQWYVIDGGSKAYIPPLTKGFSDRIRLNCPVEKVIRDSTG VTLYVAGAAQRFDHVIFACHSDQARSLLEDASCDEASILSRMAYQANEVVLHTDDSLLPRRKAAWASWNYLLDGKEGEDT RLPSLTYNMNILQHIEAEHTFCVTLNSSDKIDEDKVIRKFVYHHPVFTTESIAAQQRRDDIQGRNHTWFCGAYWYNGFHE DGVRSALDVVRGINLVHAKEEATSFHQGAA
Specific function: Unknown
COG id: COG2907
COG function: function code R; Predicted NAD/FAD-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48669; Mature: 48669
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIIGTGISGLTCGYHLHKAHDITLFEANDYIGGHTATIDFALNGKDYSVDTGFIVYN CEEEEEECCCCCCCCCEEEECCCEEEEEECCCCCCCEEEEEEEEECCCCEEECCCEEEEC DRTYPNFINMMDEIGVTGRATQMSFSVRNDSNGLEYNGHTLATLFAQKRNWFKPQFYGFI CCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCEECCCCHHHHHHHHCCCCCHHHHHHH FEILRFNKLAKASAHHDHIAQQTLGEFLDTHGFSDYFSDNYILPMGAAIWSSTLADMRAF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCHHHHHHHHHHHHHH PLTFFLRFFLNHGLLDVTNRPQWYVIDGGSKAYIPPLTKGFSDRIRLNCPVEKVIRDSTG HHHHHHHHHHHCCEEEECCCCCEEEEECCCEEECCCCCCCCCCCEEEECCHHHHHCCCCC VTLYVAGAAQRFDHVIFACHSDQARSLLEDASCDEASILSRMAYQANEVVLHTDDSLLPR EEEEEECCHHCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCC RKAAWASWNYLLDGKEGEDTRLPSLTYNMNILQHIEAEHTFCVTLNSSDKIDEDKVIRKF HHHHHCCCEEEECCCCCCCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHH VYHHPVFTTESIAAQQRRDDIQGRNHTWFCGAYWYNGFHEDGVRSALDVVRGINLVHAKE HHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHCCCCCCHHHHHHHHHHHHCCCEEECHH EATSFHQGAA HHHHHCCCCC >Mature Secondary Structure MKIAIIGTGISGLTCGYHLHKAHDITLFEANDYIGGHTATIDFALNGKDYSVDTGFIVYN CEEEEEECCCCCCCCCEEEECCCEEEEEECCCCCCCEEEEEEEEECCCCEEECCCEEEEC DRTYPNFINMMDEIGVTGRATQMSFSVRNDSNGLEYNGHTLATLFAQKRNWFKPQFYGFI CCCCCHHHHHHHHCCCCCCEEEEEEEEECCCCCCEECCCCHHHHHHHHCCCCCHHHHHHH FEILRFNKLAKASAHHDHIAQQTLGEFLDTHGFSDYFSDNYILPMGAAIWSSTLADMRAF HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCCCEEEECCHHHHHHHHHHHHHH PLTFFLRFFLNHGLLDVTNRPQWYVIDGGSKAYIPPLTKGFSDRIRLNCPVEKVIRDSTG HHHHHHHHHHHCCEEEECCCCCEEEEECCCEEECCCCCCCCCCCEEEECCHHHHHCCCCC VTLYVAGAAQRFDHVIFACHSDQARSLLEDASCDEASILSRMAYQANEVVLHTDDSLLPR EEEEEECCHHCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCCCCCCC RKAAWASWNYLLDGKEGEDTRLPSLTYNMNILQHIEAEHTFCVTLNSSDKIDEDKVIRKF HHHHHCCCEEEECCCCCCCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCCCHHHHHHHH VYHHPVFTTESIAAQQRRDDIQGRNHTWFCGAYWYNGFHEDGVRSALDVVRGINLVHAKE HHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEHCCCCCCHHHHHHHHHHHHCCCEEECHH EATSFHQGAA HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA