| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27366097
Identifier: 27366097
GI number: 27366097
Start: 2877264
End: 2878526
Strand: Reverse
Name: 27366097
Synonym: VV1_2814
Alternate gene names: NA
Gene position: 2878526-2877264 (Counterclockwise)
Preceding gene: 27366102
Following gene: 27366096
Centisome position: 87.71
GC content: 45.68
Gene sequence:
>1263_bases ATGAACAACTTAAAGAAAATCGGTGCAGTTGGTGGTGCTATCTCATTGGCATTGTGTTGGCCATTGGCGGTGGGGCAGAT TGGTCAAAATGTAATTGAAGATGCTGTTGCCAAGCTAAATAGTGCGCAACTGCAAGCGGAAATTGTCAAGTACGACCGAG GTTATCGCACATCGGAAGTCACCACGCGTTACACCATTGTTGACCCTGTGTTAGTTGAGCAATTTGAAACGGACGGGCTT CCTTTGGTTTACGAAATGCAATCGAGATTAACGCATGGGCTTACCTCGCTTGACTCGGTTTCTGACTTGATGGGGGAGCA GGCGCTACCTCTGCATATTGAAGCCACCACACAATTGAATGGAAACACGGATTTTGTTGCCACGATTGATAGTTGGAATT TTGTCAGTGACAGTGAAGGTGTTGCGGTTTCTACCGCACCGATGAAGCTGTCTGGCAATGCCACGGTGTTGGGGGATGTC GATTTTGTGCTTGATGTACCGTCGATTCAGTTTGACTTCAGTAGTGGTGAATCGCTGCATGTTGGCAATCTGACAGGAAA TGGCAAGGGCAAACACAAAAACGGTTACTGGTTAGGGCAACAAGATATTCGATTGGGCGAGTTTCAAGTCGCAGATGCCT CTGCTCAACCTTTGTTTGGCTTGTATGACGCTCAATATCTTGGTGAGACTAAGCCGGACACCAAAGGGGAGCGTTTGGCG AGCGTGTTTACTTTTAAGTCGAAAAAGCTGTTGATGTCTGACGGCAGTGAAGTCAAAGATCTTAATCTGGACTTCTCTCT AACGAATCTGGATATGCAATCTTTCGATAAGTTGATGGATGTGTATCAAAACGCTGCGTCTCTAACGCAAGAAGAAGTGC AATCACTGATGCCACATATCGATACCTTGTTTGAGAAGGGCTTTGATGTGGCAGTGAAAAACTTATCTCTAAAATTGGGT GAGGGGATATTTGAGAACACCTGGAATCTGTCAATGCCTCAAGGCACTGCGCAAGTGACGCAAGATCCAATGAAAATCAT GACATCAATGACGGGCGATCTCAGTACCTATTTCAGTGATGAGCTGGTGGCGGAATACCCATTTATCCAAGAAGGAGTGG ATGAGTTGATGGTGATGGAAATTCTGCAACAAGTCGAAGGTGGCTATACCTTGAAAGCCAAAATCGCTGAAGGTAAATTG ATGTTTGATAACGGACAACAGTTCCCACTACTCGCGCTATTGATGCCTGCGCTAATGCAATAA
Upstream 100 bases:
>100_bases TCATTCTGGTGTACTTAGCAATAGTCTGATTTATCTCAATGTTTTCACCTGAGTATAGATAGGGTAGACTCACTCAAAAC ATTCACAAATAAGTGACATT
Downstream 100 bases:
>100_bases TTGCGGATTCATTTGCTTAGAATAAAAAAGAGGTCTTAAGACCTCTTTTCTTGTTTTTCAACAGCGAAAAACGTGATATT ACTTGCAGAGTTTTTATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MNNLKKIGAVGGAISLALCWPLAVGQIGQNVIEDAVAKLNSAQLQAEIVKYDRGYRTSEVTTRYTIVDPVLVEQFETDGL PLVYEMQSRLTHGLTSLDSVSDLMGEQALPLHIEATTQLNGNTDFVATIDSWNFVSDSEGVAVSTAPMKLSGNATVLGDV DFVLDVPSIQFDFSSGESLHVGNLTGNGKGKHKNGYWLGQQDIRLGEFQVADASAQPLFGLYDAQYLGETKPDTKGERLA SVFTFKSKKLLMSDGSEVKDLNLDFSLTNLDMQSFDKLMDVYQNAASLTQEEVQSLMPHIDTLFEKGFDVAVKNLSLKLG EGIFENTWNLSMPQGTAQVTQDPMKIMTSMTGDLSTYFSDELVAEYPFIQEGVDELMVMEILQQVEGGYTLKAKIAEGKL MFDNGQQFPLLALLMPALMQ
Sequences:
>Translated_420_residues MNNLKKIGAVGGAISLALCWPLAVGQIGQNVIEDAVAKLNSAQLQAEIVKYDRGYRTSEVTTRYTIVDPVLVEQFETDGL PLVYEMQSRLTHGLTSLDSVSDLMGEQALPLHIEATTQLNGNTDFVATIDSWNFVSDSEGVAVSTAPMKLSGNATVLGDV DFVLDVPSIQFDFSSGESLHVGNLTGNGKGKHKNGYWLGQQDIRLGEFQVADASAQPLFGLYDAQYLGETKPDTKGERLA SVFTFKSKKLLMSDGSEVKDLNLDFSLTNLDMQSFDKLMDVYQNAASLTQEEVQSLMPHIDTLFEKGFDVAVKNLSLKLG EGIFENTWNLSMPQGTAQVTQDPMKIMTSMTGDLSTYFSDELVAEYPFIQEGVDELMVMEILQQVEGGYTLKAKIAEGKL MFDNGQQFPLLALLMPALMQ >Mature_420_residues MNNLKKIGAVGGAISLALCWPLAVGQIGQNVIEDAVAKLNSAQLQAEIVKYDRGYRTSEVTTRYTIVDPVLVEQFETDGL PLVYEMQSRLTHGLTSLDSVSDLMGEQALPLHIEATTQLNGNTDFVATIDSWNFVSDSEGVAVSTAPMKLSGNATVLGDV DFVLDVPSIQFDFSSGESLHVGNLTGNGKGKHKNGYWLGQQDIRLGEFQVADASAQPLFGLYDAQYLGETKPDTKGERLA SVFTFKSKKLLMSDGSEVKDLNLDFSLTNLDMQSFDKLMDVYQNAASLTQEEVQSLMPHIDTLFEKGFDVAVKNLSLKLG EGIFENTWNLSMPQGTAQVTQDPMKIMTSMTGDLSTYFSDELVAEYPFIQEGVDELMVMEILQQVEGGYTLKAKIAEGKL MFDNGQQFPLLALLMPALMQ
Specific function: Unknown
COG id: COG5339
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46010; Mature: 46010
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLKKIGAVGGAISLALCWPLAVGQIGQNVIEDAVAKLNSAQLQAEIVKYDRGYRTSEV CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCC TTRYTIVDPVLVEQFETDGLPLVYEMQSRLTHGLTSLDSVSDLMGEQALPLHIEATTQLN EEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC GNTDFVATIDSWNFVSDSEGVAVSTAPMKLSGNATVLGDVDFVLDVPSIQFDFSSGESLH CCCCEEEEECCCCCCCCCCCEEEEECCEEECCCEEEEECCEEEEECCCEEEECCCCCEEE VGNLTGNGKGKHKNGYWLGQQDIRLGEFQVADASAQPLFGLYDAQYLGETKPDTKGERLA EECCCCCCCCCCCCCEEECCCCCEECCEEEECCCCCCCEEHHHHHHCCCCCCCCCHHHHH SVFTFKSKKLLMSDGSEVKDLNLDFSLTNLDMQSFDKLMDVYQNAASLTQEEVQSLMPHI HHHHHCCCEEEECCCCCCEEEECEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTLFEKGFDVAVKNLSLKLGEGIFENTWNLSMPQGTAQVTQDPMKIMTSMTGDLSTYFSD HHHHHCCCCEEHHHEEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCH ELVAEYPFIQEGVDELMVMEILQQVEGGYTLKAKIAEGKLMFDNGQQFPLLALLMPALMQ HHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEECCCCCCHHHHHHHHHHCC >Mature Secondary Structure MNNLKKIGAVGGAISLALCWPLAVGQIGQNVIEDAVAKLNSAQLQAEIVKYDRGYRTSEV CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCC TTRYTIVDPVLVEQFETDGLPLVYEMQSRLTHGLTSLDSVSDLMGEQALPLHIEATTQLN EEEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEC GNTDFVATIDSWNFVSDSEGVAVSTAPMKLSGNATVLGDVDFVLDVPSIQFDFSSGESLH CCCCEEEEECCCCCCCCCCCEEEEECCEEECCCEEEEECCEEEEECCCEEEECCCCCEEE VGNLTGNGKGKHKNGYWLGQQDIRLGEFQVADASAQPLFGLYDAQYLGETKPDTKGERLA EECCCCCCCCCCCCCEEECCCCCEECCEEEECCCCCCCEEHHHHHHCCCCCCCCCHHHHH SVFTFKSKKLLMSDGSEVKDLNLDFSLTNLDMQSFDKLMDVYQNAASLTQEEVQSLMPHI HHHHHCCCEEEECCCCCCEEEECEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DTLFEKGFDVAVKNLSLKLGEGIFENTWNLSMPQGTAQVTQDPMKIMTSMTGDLSTYFSD HHHHHCCCCEEHHHEEEECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCH ELVAEYPFIQEGVDELMVMEILQQVEGGYTLKAKIAEGKLMFDNGQQFPLLALLMPALMQ HHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEEECCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA