| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is yniA [C]
Identifier: 27365858
GI number: 27365858
Start: 2599273
End: 2600139
Strand: Reverse
Name: yniA [C]
Synonym: VV1_2562
Alternate gene names: 27365858
Gene position: 2600139-2599273 (Counterclockwise)
Preceding gene: 27365862
Following gene: 27365857
Centisome position: 79.23
GC content: 43.6
Gene sequence:
>867_bases ATGTGGCAGGCCATTTCTCAACAGCTTTCTGAAACCTTAATGTTTTCCTACGATATCGTTGAAAAAGTGCATTTGTCTGG TGGCGACATCAATGAATGCTATATGATCAGCGATGGTGAGCAGCGCTATTTCGTTAAGATCAACTCAAAAGACTTTTTAA GCAAGTTCCAAGTTGAAGCCGAAAACCTGCGTTTGCTTCGCCAAACCGACAGCGTCACCCTACCTGAGTTGGTTTTGATT GGTAATACCAAATCCAACGCATTTATCATCCTTAATTTCCTCCCGACAAAGCCCCTTGAAGATACCGAGAACAGCTATAA ATTTGGTCAACAATTGGCTTATCTTCATCTTTGGGGAGAACAGAAAGAGTATGGCTGCGATCAAGACAACTACTTAGGTG CGACTTTGCAACCCAATGCGTGGCATAAGAAGTGGTCTACCTTTTTCTCAGAGCAACGAATAGGCTGGCAATTGCAACTG CTGAAAGAAAAAGGGGTCACATTCGGAGTGATTGATGAGATTGTTGAAGTTGTTGCTCGGCAGTTACTTAACCACAATCC CCGCCCCTCTCTCATTCACGGCGATTTGTGGCATGGTAATGTGGCTTTGTCTGCCTTTGGGCCTATTTGTTATGACCCAG CCTGTTACTGGGGAGACCGCGAATGTGATATTGCGATGACGGAACTTTTTGGTGGATTTAACGCTGAGTTTTATCGTGGC TACGAAGATATTGCACCACTTCCTTTCGGTTATACTCAGCGCAAAGAGATCTACAATCTTTATCATATTCTCAATCACTG TAACCAATTTGGCGGCCACTATTTAGAGCAGGCACAAAAATCGATCGACAAAATCCTTTCCTACTAA
Upstream 100 bases:
>100_bases AATAATCACAATGTTTGAAAAGTTTGTCAGTTAACCAAATCCGAAATTGAGTTATGAATTAAACTATTAGATGTGCGGTT ATCAAAAAGAGAGGACGACT
Downstream 100 bases:
>100_bases CGTTGTTTTCAGATGTGCGCCATGCAATTTTCGACGCACATCACTATCAACTCTAAGAAAGCGTTTCAATATTGAGTTAA TAGTCAAGTTTCGTACTTAA
Product: Fructosamine kinase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MWQAISQQLSETLMFSYDIVEKVHLSGGDINECYMISDGEQRYFVKINSKDFLSKFQVEAENLRLLRQTDSVTLPELVLI GNTKSNAFIILNFLPTKPLEDTENSYKFGQQLAYLHLWGEQKEYGCDQDNYLGATLQPNAWHKKWSTFFSEQRIGWQLQL LKEKGVTFGVIDEIVEVVARQLLNHNPRPSLIHGDLWHGNVALSAFGPICYDPACYWGDRECDIAMTELFGGFNAEFYRG YEDIAPLPFGYTQRKEIYNLYHILNHCNQFGGHYLEQAQKSIDKILSY
Sequences:
>Translated_288_residues MWQAISQQLSETLMFSYDIVEKVHLSGGDINECYMISDGEQRYFVKINSKDFLSKFQVEAENLRLLRQTDSVTLPELVLI GNTKSNAFIILNFLPTKPLEDTENSYKFGQQLAYLHLWGEQKEYGCDQDNYLGATLQPNAWHKKWSTFFSEQRIGWQLQL LKEKGVTFGVIDEIVEVVARQLLNHNPRPSLIHGDLWHGNVALSAFGPICYDPACYWGDRECDIAMTELFGGFNAEFYRG YEDIAPLPFGYTQRKEIYNLYHILNHCNQFGGHYLEQAQKSIDKILSY >Mature_288_residues MWQAISQQLSETLMFSYDIVEKVHLSGGDINECYMISDGEQRYFVKINSKDFLSKFQVEAENLRLLRQTDSVTLPELVLI GNTKSNAFIILNFLPTKPLEDTENSYKFGQQLAYLHLWGEQKEYGCDQDNYLGATLQPNAWHKKWSTFFSEQRIGWQLQL LKEKGVTFGVIDEIVEVVARQLLNHNPRPSLIHGDLWHGNVALSAFGPICYDPACYWGDRECDIAMTELFGGFNAEFYRG YEDIAPLPFGYTQRKEIYNLYHILNHCNQFGGHYLEQAQKSIDKILSY
Specific function: Unknown
COG id: COG3001
COG function: function code G; Fructosamine-3-kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fructosamine kinase family
Homologues:
Organism=Homo sapiens, GI20149680, Length=280, Percent_Identity=29.2857142857143, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI11545906, Length=281, Percent_Identity=29.1814946619217, Blast_Score=117, Evalue=2e-26, Organism=Escherichia coli, GI1788019, Length=287, Percent_Identity=44.9477351916376, Blast_Score=281, Evalue=3e-77, Organism=Caenorhabditis elegans, GI212659227, Length=311, Percent_Identity=25.7234726688103, Blast_Score=94, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2562_VIBVU (Q8D9N5)
Other databases:
- EMBL: AE016795 - RefSeq: NP_761386.1 - ProteinModelPortal: Q8D9N5 - GeneID: 1179414 - GenomeReviews: AE016795_GR - KEGG: vvu:VV1_2562 - HOGENOM: HBG635091 - OMA: ILNHANM - ProtClustDB: CLSK874419 - BioCyc: VVUL216895:VV1_2562-MONOMER - InterPro: IPR016477 - InterPro: IPR011009 - PIRSF: PIRSF006221
Pfam domain/function: PF03881 Fructosamin_kin; SSF56112 Kinase_like
EC number: NA
Molecular weight: Translated: 33322; Mature: 33322
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQAISQQLSETLMFSYDIVEKVHLSGGDINECYMISDGEQRYFVKINSKDFLSKFQVEA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCHHHHHHHHHCH ENLRLLRQTDSVTLPELVLIGNTKSNAFIILNFLPTKPLEDTENSYKFGQQLAYLHLWGE HHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHEEEEEEECC QKEYGCDQDNYLGATLQPNAWHKKWSTFFSEQRIGWQLQLLKEKGVTFGVIDEIVEVVAR CHHCCCCCCCEECCEECCCHHHHHHHHHHHHHCCCCEEEEHHHCCCEEHHHHHHHHHHHH QLLNHNPRPSLIHGDLWHGNVALSAFGPICYDPACYWGDRECDIAMTELFGGFNAEFYRG HHHCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHHCCCCHHHHCC YEDIAPLPFGYTQRKEIYNLYHILNHCNQFGGHYLEQAQKSIDKILSY HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MWQAISQQLSETLMFSYDIVEKVHLSGGDINECYMISDGEQRYFVKINSKDFLSKFQVEA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEECCHHHHHHHHHCH ENLRLLRQTDSVTLPELVLIGNTKSNAFIILNFLPTKPLEDTENSYKFGQQLAYLHLWGE HHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHEEEEEEECC QKEYGCDQDNYLGATLQPNAWHKKWSTFFSEQRIGWQLQLLKEKGVTFGVIDEIVEVVAR CHHCCCCCCCEECCEECCCHHHHHHHHHHHHHCCCCEEEEHHHCCCEEHHHHHHHHHHHH QLLNHNPRPSLIHGDLWHGNVALSAFGPICYDPACYWGDRECDIAMTELFGGFNAEFYRG HHHCCCCCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHHCCCCHHHHCC YEDIAPLPFGYTQRKEIYNLYHILNHCNQFGGHYLEQAQKSIDKILSY HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA