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The map label for this gene is 27365829

Identifier: 27365829

GI number: 27365829

Start: 2570550

End: 2570792

Strand: Reverse

Name: 27365829

Synonym: VV1_2526

Alternate gene names: NA

Gene position: 2570792-2570550 (Counterclockwise)

Preceding gene: 27365831

Following gene: 27365828

Centisome position: 78.33

GC content: 39.92

Gene sequence:

>243_bases
ATGGCTAAGAACACTAGTATTACTTTGGGTGACCATTTTGACGGTTTTATTGCTAATCAAATCCAAAGCGGTCGCTATGG
CTCTGCAAGTGAAGTCATTCGTTCTGCTTTACGTTTACTTGAAACCCAAGAAACTAAAATGAACACTTTACGCCAGTTGC
TTGTTGAGGGCGAAGAAAGTGGAGTTGCGGATTATGACCTTGATTCGTTTATCAATGAGTTAGATAGCGAAGAGAGAAAA
TGA

Upstream 100 bases:

>100_bases
CCATGCGTTGCGAATCCGGCTTAAACGCTTTGTTATGCGCCTTGCATCCAAGCCCAACTAATACCATAATTAGGTATCTA
TTGGTATTGAGGACTAAGTT

Downstream 100 bases:

>100_bases
GACCATTTCAGTTAACTAACAAGGCGAAATCTGATTTAAGAGATATAGCCTTGTTTACCTCTCGACGTTGGGGTCGCGAA
CAGCGAAATATTTATCTAAA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MAKNTSITLGDHFDGFIANQIQSGRYGSASEVIRSALRLLETQETKMNTLRQLLVEGEESGVADYDLDSFINELDSEERK

Sequences:

>Translated_80_residues
MAKNTSITLGDHFDGFIANQIQSGRYGSASEVIRSALRLLETQETKMNTLRQLLVEGEESGVADYDLDSFINELDSEERK
>Mature_79_residues
AKNTSITLGDHFDGFIANQIQSGRYGSASEVIRSALRLLETQETKMNTLRQLLVEGEESGVADYDLDSFINELDSEERK

Specific function: Unknown

COG id: COG3609

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0156 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005360
- InterPro:   IPR010985
- InterPro:   IPR022789 [H]

Pfam domain/function: PF03693 RHH_2 [H]

EC number: NA

Molecular weight: Translated: 8954; Mature: 8823

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNTSITLGDHFDGFIANQIQSGRYGSASEVIRSALRLLETQETKMNTLRQLLVEGEES
CCCCCCEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GVADYDLDSFINELDSEERK
CCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKNTSITLGDHFDGFIANQIQSGRYGSASEVIRSALRLLETQETKMNTLRQLLVEGEES
CCCCCEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GVADYDLDSFINELDSEERK
CCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]