| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27365803
Identifier: 27365803
GI number: 27365803
Start: 2542601
End: 2542942
Strand: Reverse
Name: 27365803
Synonym: VV1_2498
Alternate gene names: NA
Gene position: 2542942-2542601 (Counterclockwise)
Preceding gene: 326424028
Following gene: 27365785
Centisome position: 77.48
GC content: 40.06
Gene sequence:
>342_bases ATGTCAAAAATTAATGTTTGTGTTTCAAAACCTGCGACTCGTGAGTTCGCAAAGCTTCCAAAAGATGCCCAGAAAGCCTT CAGAACTTATGTTGAAGAAACTCTTAAAAAAGGTGAGTATTCGAGCCTCGATACCGAAAAGTTCAAATCAGTTCATACTT CGGTTGTAGAGGTCAAAGTTAAAGGTCGTCCTGCGGGTCGTATGTTCTACACAACATTGGTCGATGGTCACATCGAAGTT TTGGCTTTTGCCACTAAATCCAGAAATGGTCAAGATCCCAAAATCAAAGCTACCGTTGAACAACGGTTTAAAGATTTCAA ATCAGCTCAAGGGATCCATTAA
Upstream 100 bases:
>100_bases ACATTAACAAACAGGAAATAGCTTATGCAATTTTTTGTAACTTTCAAATCACGTCATAGGAGTGCCTATGGCAAAAAACT AATTCTATAAAGGAGAATTT
Downstream 100 bases:
>100_bases TTTTAAGAGGGAGCACGCTCCCTCTTTTTTGCTTATTCTGAAATTGCGATAGTCAACCCAGACTTTGTACTAACCTCAAT TTCACAACCCAATTTATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MSKINVCVSKPATREFAKLPKDAQKAFRTYVEETLKKGEYSSLDTEKFKSVHTSVVEVKVKGRPAGRMFYTTLVDGHIEV LAFATKSRNGQDPKIKATVEQRFKDFKSAQGIH
Sequences:
>Translated_113_residues MSKINVCVSKPATREFAKLPKDAQKAFRTYVEETLKKGEYSSLDTEKFKSVHTSVVEVKVKGRPAGRMFYTTLVDGHIEV LAFATKSRNGQDPKIKATVEQRFKDFKSAQGIH >Mature_112_residues SKINVCVSKPATREFAKLPKDAQKAFRTYVEETLKKGEYSSLDTEKFKSVHTSVVEVKVKGRPAGRMFYTTLVDGHIEVL AFATKSRNGQDPKIKATVEQRFKDFKSAQGIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12738; Mature: 12607
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKINVCVSKPATREFAKLPKDAQKAFRTYVEETLKKGEYSSLDTEKFKSVHTSVVEVKV CCCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEE KGRPAGRMFYTTLVDGHIEVLAFATKSRNGQDPKIKATVEQRFKDFKSAQGIH CCCCCCCEEEEEHHCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKINVCVSKPATREFAKLPKDAQKAFRTYVEETLKKGEYSSLDTEKFKSVHTSVVEVKV CCCCEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEEEEE KGRPAGRMFYTTLVDGHIEVLAFATKSRNGQDPKIKATVEQRFKDFKSAQGIH CCCCCCCEEEEEHHCCCEEEEEEECCCCCCCCCEEEHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA