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The map label for this gene is 27365374

Identifier: 27365374

GI number: 27365374

Start: 2026725

End: 2028011

Strand: Reverse

Name: 27365374

Synonym: VV1_2036

Alternate gene names: NA

Gene position: 2028011-2026725 (Counterclockwise)

Preceding gene: 27365375

Following gene: 326423924

Centisome position: 61.79

GC content: 39.55

Gene sequence:

>1287_bases
ATGCATATCTATATTTTTGGTAACCTAAATTCAGGTAAAACAACGTTAAGTAAACAAATACAAGGACGTTTGCCTGAGTT
CCCTTATTTATCTTTAGATGAGTATCGAATTCGCTTTGGCGATGGAACCGAGCAAGGTGAGCAACTTGCTTGTGAGCATT
TCCTTGCTGCGGTTAAACAACAGGAAAACGCTATTGTTGAATTTACAGGATACGGTCAAACAGCTAGCCTTCTTACCAAT
CAATTAGATAGGAAAACAGGCATATTAATCTGTTGCACTAGAGATATTGAGCAGAGCATCAATGCAATTGATGACGAGAA
ATACTCAGAAATCCCTTACCCATCATCCTACAAAAAACTGCAAGCTGTTGATGAAACTATTAGATTTTTGGAAGATAAAA
TCATACCGATAGAGCTAGAAACTCACTGGCAAAGACAGATTTGGCAGTCTTACAGTTTTGACTTCTCTGATAACTTTGAT
GCCTTCTGGACGGCCTTCCCATTATCTCAACACACTTGGGTCAGTAAGCTGAATAAAGTATTGAGCACAGATACAAGCGT
ACCTATAGCTCTACTTTACGGAAGCTTGGGGGCTAATCAGTTAACAAAGCGCTCTGATATCGATTTATTTATTCAGTCAT
CGATTTCGGTTCAAGGTTGGCATGAAAGACTCCTTAGATTGTTCGGTGAACAAGTGGCTCATACCGATATTTTGGGGTCG
AAAATCACTCTTAGGACACAAGACCGTTTGCTTATAGAAATCGTTATAGGCCAATCGCTGTCTGACATTTCTCTTTATTA
TCGTGAGTCACAAATCTACAACGTTCATTTCACTATTTTAAAGGGTGAGCTTGGTCTTGCAGAACAATTAGACGCCGTTA
CCAAAACACATACAAGCGAGCGAAAGCAAGCCAAAGAGTTGGCCGCTCAGGTTTACTTTTTATTTTGCTCCTTACCGAAC
CTTATCGCTAACAACGACAGTTACAAGTACCACTTTCACTGCTCTATCATCCAGCACTATTGTGTTCAGCTAGAACATTT
ATTGCTAAGTGAGTTTAAACACAACTACCTTCCCAAACATGCCGCTACAACATTGATTAATTTCCCATGGCAAGTATTTA
ACTGCTCAGCAACTCATATCAGTACAGCGCAATATACTGAGCTTTATCAGTACCTAATCACACTGTTCGAACGGCTTAGA
AAGAAACAACTGATTAAAAGTAATGGCTATTTCTCTGTGGAGAGTTGCTTTCTCCACGAGATCCCTAGTGAAGATAACAA
GGCTTAA

Upstream 100 bases:

>100_bases
AAGCAATTTCTGAGTTGGAAGCTGAGATTTATCAATCAGCCTAATCACCATTTAAACCAAGCTAGAGTTTCTTTAGCTTG
GTTAACGACCTCAAGTCACA

Downstream 100 bases:

>100_bases
AAATTGAAACATCATCAAATAAAAACAATCAACTACCAACTGTGGCTAGTGCTGATTCTGACAAGCTTAATACCATTAAT
CTACTCAACTACACGAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MHIYIFGNLNSGKTTLSKQIQGRLPEFPYLSLDEYRIRFGDGTEQGEQLACEHFLAAVKQQENAIVEFTGYGQTASLLTN
QLDRKTGILICCTRDIEQSINAIDDEKYSEIPYPSSYKKLQAVDETIRFLEDKIIPIELETHWQRQIWQSYSFDFSDNFD
AFWTAFPLSQHTWVSKLNKVLSTDTSVPIALLYGSLGANQLTKRSDIDLFIQSSISVQGWHERLLRLFGEQVAHTDILGS
KITLRTQDRLLIEIVIGQSLSDISLYYRESQIYNVHFTILKGELGLAEQLDAVTKTHTSERKQAKELAAQVYFLFCSLPN
LIANNDSYKYHFHCSIIQHYCVQLEHLLLSEFKHNYLPKHAATTLINFPWQVFNCSATHISTAQYTELYQYLITLFERLR
KKQLIKSNGYFSVESCFLHEIPSEDNKA

Sequences:

>Translated_428_residues
MHIYIFGNLNSGKTTLSKQIQGRLPEFPYLSLDEYRIRFGDGTEQGEQLACEHFLAAVKQQENAIVEFTGYGQTASLLTN
QLDRKTGILICCTRDIEQSINAIDDEKYSEIPYPSSYKKLQAVDETIRFLEDKIIPIELETHWQRQIWQSYSFDFSDNFD
AFWTAFPLSQHTWVSKLNKVLSTDTSVPIALLYGSLGANQLTKRSDIDLFIQSSISVQGWHERLLRLFGEQVAHTDILGS
KITLRTQDRLLIEIVIGQSLSDISLYYRESQIYNVHFTILKGELGLAEQLDAVTKTHTSERKQAKELAAQVYFLFCSLPN
LIANNDSYKYHFHCSIIQHYCVQLEHLLLSEFKHNYLPKHAATTLINFPWQVFNCSATHISTAQYTELYQYLITLFERLR
KKQLIKSNGYFSVESCFLHEIPSEDNKA
>Mature_428_residues
MHIYIFGNLNSGKTTLSKQIQGRLPEFPYLSLDEYRIRFGDGTEQGEQLACEHFLAAVKQQENAIVEFTGYGQTASLLTN
QLDRKTGILICCTRDIEQSINAIDDEKYSEIPYPSSYKKLQAVDETIRFLEDKIIPIELETHWQRQIWQSYSFDFSDNFD
AFWTAFPLSQHTWVSKLNKVLSTDTSVPIALLYGSLGANQLTKRSDIDLFIQSSISVQGWHERLLRLFGEQVAHTDILGS
KITLRTQDRLLIEIVIGQSLSDISLYYRESQIYNVHFTILKGELGLAEQLDAVTKTHTSERKQAKELAAQVYFLFCSLPN
LIANNDSYKYHFHCSIIQHYCVQLEHLLLSEFKHNYLPKHAATTLINFPWQVFNCSATHISTAQYTELYQYLITLFERLR
KKQLIKSNGYFSVESCFLHEIPSEDNKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49403; Mature: 49403

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIYIFGNLNSGKTTLSKQIQGRLPEFPYLSLDEYRIRFGDGTEQGEQLACEHFLAAVKQ
CEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
QENAIVEFTGYGQTASLLTNQLDRKTGILICCTRDIEQSINAIDDEKYSEIPYPSSYKKL
CCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHH
QAVDETIRFLEDKIIPIELETHWQRQIWQSYSFDFSDNFDAFWTAFPLSQHTWVSKLNKV
HHHHHHHHHHHHCEEEEEECHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
LSTDTSVPIALLYGSLGANQLTKRSDIDLFIQSSISVQGWHERLLRLFGEQVAHTDILGS
HHCCCCCCCEEEECCCCCCHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
KITLRTQDRLLIEIVIGQSLSDISLYYRESQIYNVHFTILKGELGLAEQLDAVTKTHTSE
EEEEEECCCEEEEEEECCCCCHHHEEEECCEEEEEEEEEEECCCCHHHHHHHHHHHCCHH
RKQAKELAAQVYFLFCSLPNLIANNDSYKYHFHCSIIQHYCVQLEHLLLSEFKHNYLPKH
HHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHH
AATTLINFPWQVFNCSATHISTAQYTELYQYLITLFERLRKKQLIKSNGYFSVESCFLHE
HHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHC
IPSEDNKA
CCCCCCCC
>Mature Secondary Structure
MHIYIFGNLNSGKTTLSKQIQGRLPEFPYLSLDEYRIRFGDGTEQGEQLACEHFLAAVKQ
CEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
QENAIVEFTGYGQTASLLTNQLDRKTGILICCTRDIEQSINAIDDEKYSEIPYPSSYKKL
CCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCHHHHH
QAVDETIRFLEDKIIPIELETHWQRQIWQSYSFDFSDNFDAFWTAFPLSQHTWVSKLNKV
HHHHHHHHHHHHCEEEEEECHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHH
LSTDTSVPIALLYGSLGANQLTKRSDIDLFIQSSISVQGWHERLLRLFGEQVAHTDILGS
HHCCCCCCCEEEECCCCCCHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
KITLRTQDRLLIEIVIGQSLSDISLYYRESQIYNVHFTILKGELGLAEQLDAVTKTHTSE
EEEEEECCCEEEEEEECCCCCHHHEEEECCEEEEEEEEEEECCCCHHHHHHHHHHHCCHH
RKQAKELAAQVYFLFCSLPNLIANNDSYKYHFHCSIIQHYCVQLEHLLLSEFKHNYLPKH
HHHHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHH
AATTLINFPWQVFNCSATHISTAQYTELYQYLITLFERLRKKQLIKSNGYFSVESCFLHE
HHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHC
IPSEDNKA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA