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The map label for this gene is chiD [H]

Identifier: 27365184

GI number: 27365184

Start: 1828887

End: 1831427

Strand: Reverse

Name: chiD [H]

Synonym: VV1_1833

Alternate gene names: 27365184

Gene position: 1831427-1828887 (Counterclockwise)

Preceding gene: 27365186

Following gene: 27365182

Centisome position: 55.8

GC content: 51.16

Gene sequence:

>2541_bases
ATGAGAGTCACTTTGTTATCAAGCGCGCTGATCAGTGCGCTTGGCGTCAGCTATCAAGCGCAGGCTTATAACTGCCAAAG
CCTAGCGACATGGAATAGCAGCGAGATCTACACATCCGGTAGTCAAGTTCAAAAAGAGAACCAAGCATTCGAAGCCGCCT
ACTGGACTCAAGGCAATGATCCCATCACGAACTCTGGCCCTTGGGAGGCATGGAAATCTCTTGGGCAATGTGACAACGGC
GGAGGTAATCTACCACCAAGCATCACCTTCTCTTCTCCAACCAATAATGCAGAAATTCCTGAAGGCGCAGTCATCACGTT
GTTGGCGAATGCCAGCGATGAAGATGGCCAAGTTAGCCAAGTCGAGTTTCTTGCAGGAACACAATTGATTGCGGTGGTCA
CACAAGCACCATTTGAAACCCCATGGACAGCGGTGAAAGGTACCTCTCAATTAACGGCCATTGCCACGGACAATGAAGGG
GCAACCCAGTCCACCAACGTTAATATCAGCGTGTTACCCCAAGGAGAGCTTGCGCCACCAACGGTTTCTCTGACCAGCCC
AACCGGAAGTGAAACACTGAGCGATAAAGACAGCTTAATCGTGAGCGCTCAAGCGGCAGACAGCGATGGCATCGTGACGC
AAGTGGAGTTTTTCATCGATAATCAATCGGTCTTTGTGGATACCAATGCGCCTTACGAGTACCTCTGGAATGCGGTTGCG
GGCACCCATACATTCAAAGCACAAGCGACCGATGATGCCAATTTAACCACCATGAGCCAAAACGTCTCATTGGTTGTCAG
TGGCAGCCATTCTGGCGGCTGCGCGGATGCAGTTCCTTATCTTGCTGGCACACGCTACGAAGCGGGTACGTTGGTCTCCA
ATCTCAATCAAAAATACCGTTGCGATGTCGCAGGCTGGTGTTCTTCTGATGCCGCTTGGGCTTACGAGCCTGGGGTAGGC
CAATACTGGCAAGATGCTTGGAGTGGATTGGGCGCGTGCTCAACCCCACCGCAAATTACCATTACCTCCCCCAATGACGG
TGCGGTGGTGCTCGCAGGCAGTAGCCTAACCCTCAGCGCCGATGCCAGTGACGCAGACGGCAGCGTCACCCAAGTCGAGT
TTTTCGCGAATAACTCGAGCTTAGGTGTGGTGACTCAGCCTCCCTACGCACAGACTTGGAGTGCAACTTTCGTTGGAGCC
AATCAGCTAAAAGCGATCGCAACCGACAACGACAATAACGTGAGTGAGTCGGTGGTCAATGTCACGGTCAGTGATCAAGC
GCTTGTCGTCACGCTCACTTCACCAACGGCTGGCCAAACGGTTGGTTTGGGTAAAAACGTGACCCTAAGTGCCGACGTGA
CCTCCCTCACTTCCGCGATTAAGCAAGTCGACTTTGTCGTCAACGGCAGTGTGATTGCAACCGACAATAGCGCTCCGTAC
TCTGTTTCTTGGACACCAGCGGCGATCGGTAACTTTACCGTCAGTGCTCAAGCGGTCGATTTAGCGGGTAATCAAGCGCT
CTCGGAAGCGGCGGCAATCAAGGTGGTTGAGCAGTCGGAAAAACGCCACAAACTGATTGGCTACTGGCACAACTTTGTGA
ATGGGGCTGGCTGTCCGATACGTCTCGCTGACATGTCAAACGCATGGGATGTGATTGATATTGCCTTTGCAGAAAACGAT
CGCAACAGCAATGGCACGGTCCACTTCAACCTTTACTCAGGGGATATTTACAGCAGTTGTGCGCCGCTTGATCCGCTCCA
GTTCAAACAAGATATGGCGGCACTGCAGGCGCAAGGTAAAAAGTTTGTACTTTCCCTTGGCGGAGCAGAAGGCACCATTA
CTCTGAATACCGATCAAGATGAAGCGAATTTTGTTTCTAGCTTAACCGAACTGATCAATGAATGGGGATTTGATGGACTC
GATGTGGATCTTGAAAGCGGCTCAAACCTTGTTCACGGTTCGCAAATTCAGGCGCGATTGGGCAGGGCCCTACTGCAAAT
TGAACAAAATATCGGTGGTGACATGTACCTCACCATGGCACCAGAACATCCTTACGTTCAAGGCGGTATGGTGGCCTACA
GCGGAATTTGGGGAGCCTACATTCCGGTCATTAATGCTACTCGCAGCACACTCGACTTACTTCATGTTCAGCTCTACAAC
AATGGTGGATTACCCAACCCTTACCTACCGGGCGCCGCTCCTGAAGGCTCTGTCGATATGATGGTTGCGCAATCTAAGAT
GTTGATTGAAGGGTTTGAACTCGCCGATGGTACTCGTTTTGAGCCGCTTCGCGACGACCAGGTGGCCATTGGCCTTCCTT
CAGGGCCAAGCTCAGCTAACTCTGGCCAAGCGCCGACTCAAAATATCCTAGATGCACTAGATTGTTTAACATTAGGCACA
AAATGTTCCACGGTGAAACCGGCGTTCAACTACCCGAATTTTGGTGGCGTGATGACTTGGTCAATCAATTGGGATAAGCA
TGATGGTTTCAATTTCTCCAAACCTGTGGGAGATAAATTAACGCAAATGAATGCCCGCTAA

Upstream 100 bases:

>100_bases
TCGAGGGAGTAAATATCATTTAATCAGCAATTTAGCCTGCAAAACGCTCCAACTTGGCTACTTATTACTCTTGAGATGTT
TTTTATTAATGGAGAGAAAA

Downstream 100 bases:

>100_bases
ACACAAGCGTCTGTAAAACCAGAGAGCACCTCGAAGGGTGCTCTCTTTGTTGCAAAATTAGATGGTAAATACCTGATAGT
TCTTCAACTCTGGAATCTTC

Product: chitinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 846; Mature: 846

Protein sequence:

>846_residues
MRVTLLSSALISALGVSYQAQAYNCQSLATWNSSEIYTSGSQVQKENQAFEAAYWTQGNDPITNSGPWEAWKSLGQCDNG
GGNLPPSITFSSPTNNAEIPEGAVITLLANASDEDGQVSQVEFLAGTQLIAVVTQAPFETPWTAVKGTSQLTAIATDNEG
ATQSTNVNISVLPQGELAPPTVSLTSPTGSETLSDKDSLIVSAQAADSDGIVTQVEFFIDNQSVFVDTNAPYEYLWNAVA
GTHTFKAQATDDANLTTMSQNVSLVVSGSHSGGCADAVPYLAGTRYEAGTLVSNLNQKYRCDVAGWCSSDAAWAYEPGVG
QYWQDAWSGLGACSTPPQITITSPNDGAVVLAGSSLTLSADASDADGSVTQVEFFANNSSLGVVTQPPYAQTWSATFVGA
NQLKAIATDNDNNVSESVVNVTVSDQALVVTLTSPTAGQTVGLGKNVTLSADVTSLTSAIKQVDFVVNGSVIATDNSAPY
SVSWTPAAIGNFTVSAQAVDLAGNQALSEAAAIKVVEQSEKRHKLIGYWHNFVNGAGCPIRLADMSNAWDVIDIAFAEND
RNSNGTVHFNLYSGDIYSSCAPLDPLQFKQDMAALQAQGKKFVLSLGGAEGTITLNTDQDEANFVSSLTELINEWGFDGL
DVDLESGSNLVHGSQIQARLGRALLQIEQNIGGDMYLTMAPEHPYVQGGMVAYSGIWGAYIPVINATRSTLDLLHVQLYN
NGGLPNPYLPGAAPEGSVDMMVAQSKMLIEGFELADGTRFEPLRDDQVAIGLPSGPSSANSGQAPTQNILDALDCLTLGT
KCSTVKPAFNYPNFGGVMTWSINWDKHDGFNFSKPVGDKLTQMNAR

Sequences:

>Translated_846_residues
MRVTLLSSALISALGVSYQAQAYNCQSLATWNSSEIYTSGSQVQKENQAFEAAYWTQGNDPITNSGPWEAWKSLGQCDNG
GGNLPPSITFSSPTNNAEIPEGAVITLLANASDEDGQVSQVEFLAGTQLIAVVTQAPFETPWTAVKGTSQLTAIATDNEG
ATQSTNVNISVLPQGELAPPTVSLTSPTGSETLSDKDSLIVSAQAADSDGIVTQVEFFIDNQSVFVDTNAPYEYLWNAVA
GTHTFKAQATDDANLTTMSQNVSLVVSGSHSGGCADAVPYLAGTRYEAGTLVSNLNQKYRCDVAGWCSSDAAWAYEPGVG
QYWQDAWSGLGACSTPPQITITSPNDGAVVLAGSSLTLSADASDADGSVTQVEFFANNSSLGVVTQPPYAQTWSATFVGA
NQLKAIATDNDNNVSESVVNVTVSDQALVVTLTSPTAGQTVGLGKNVTLSADVTSLTSAIKQVDFVVNGSVIATDNSAPY
SVSWTPAAIGNFTVSAQAVDLAGNQALSEAAAIKVVEQSEKRHKLIGYWHNFVNGAGCPIRLADMSNAWDVIDIAFAEND
RNSNGTVHFNLYSGDIYSSCAPLDPLQFKQDMAALQAQGKKFVLSLGGAEGTITLNTDQDEANFVSSLTELINEWGFDGL
DVDLESGSNLVHGSQIQARLGRALLQIEQNIGGDMYLTMAPEHPYVQGGMVAYSGIWGAYIPVINATRSTLDLLHVQLYN
NGGLPNPYLPGAAPEGSVDMMVAQSKMLIEGFELADGTRFEPLRDDQVAIGLPSGPSSANSGQAPTQNILDALDCLTLGT
KCSTVKPAFNYPNFGGVMTWSINWDKHDGFNFSKPVGDKLTQMNAR
>Mature_846_residues
MRVTLLSSALISALGVSYQAQAYNCQSLATWNSSEIYTSGSQVQKENQAFEAAYWTQGNDPITNSGPWEAWKSLGQCDNG
GGNLPPSITFSSPTNNAEIPEGAVITLLANASDEDGQVSQVEFLAGTQLIAVVTQAPFETPWTAVKGTSQLTAIATDNEG
ATQSTNVNISVLPQGELAPPTVSLTSPTGSETLSDKDSLIVSAQAADSDGIVTQVEFFIDNQSVFVDTNAPYEYLWNAVA
GTHTFKAQATDDANLTTMSQNVSLVVSGSHSGGCADAVPYLAGTRYEAGTLVSNLNQKYRCDVAGWCSSDAAWAYEPGVG
QYWQDAWSGLGACSTPPQITITSPNDGAVVLAGSSLTLSADASDADGSVTQVEFFANNSSLGVVTQPPYAQTWSATFVGA
NQLKAIATDNDNNVSESVVNVTVSDQALVVTLTSPTAGQTVGLGKNVTLSADVTSLTSAIKQVDFVVNGSVIATDNSAPY
SVSWTPAAIGNFTVSAQAVDLAGNQALSEAAAIKVVEQSEKRHKLIGYWHNFVNGAGCPIRLADMSNAWDVIDIAFAEND
RNSNGTVHFNLYSGDIYSSCAPLDPLQFKQDMAALQAQGKKFVLSLGGAEGTITLNTDQDEANFVSSLTELINEWGFDGL
DVDLESGSNLVHGSQIQARLGRALLQIEQNIGGDMYLTMAPEHPYVQGGMVAYSGIWGAYIPVINATRSTLDLLHVQLYN
NGGLPNPYLPGAAPEGSVDMMVAQSKMLIEGFELADGTRFEPLRDDQVAIGLPSGPSSANSGQAPTQNILDALDCLTLGT
KCSTVKPAFNYPNFGGVMTWSINWDKHDGFNFSKPVGDKLTQMNAR

Specific function: Unknown

COG id: COG3979

COG function: function code R; Uncharacterized protein contain chitin-binding domain type 3

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 fibronectin type-III domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR015520 [H]

Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 89220; Mature: 89220

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTLLSSALISALGVSYQAQAYNCQSLATWNSSEIYTSGSQVQKENQAFEAAYWTQGND
CEEEEHHHHHHHHHCCCEEECCCCCCEEECCCCCEEEECCHHHHHHCCCEEEEEEECCCC
PITNSGPWEAWKSLGQCDNGGGNLPPSITFSSPTNNAEIPEGAVITLLANASDEDGQVSQ
CCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEE
VEFLAGTQLIAVVTQAPFETPWTAVKGTSQLTAIATDNEGATQSTNVNISVLPQGELAPP
EEEECCCEEEEEEECCCCCCCCCEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCC
TVSLTSPTGSETLSDKDSLIVSAQAADSDGIVTQVEFFIDNQSVFVDTNAPYEYLWNAVA
EEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCEEEEECCCCHHHHHHHHC
GTHTFKAQATDDANLTTMSQNVSLVVSGSHSGGCADAVPYLAGTRYEAGTLVSNLNQKYR
CCEEEEEECCCCCCEEEEECCEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHCCCEEE
CDVAGWCSSDAAWAYEPGVGQYWQDAWSGLGACSTPPQITITSPNDGAVVLAGSSLTLSA
ECCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCEEEEEC
DASDADGSVTQVEFFANNSSLGVVTQPPYAQTWSATFVGANQLKAIATDNDNNVSESVVN
CCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEEE
VTVSDQALVVTLTSPTAGQTVGLGKNVTLSADVTSLTSAIKQVDFVVNGSVIATDNSAPY
EEECCCEEEEEEECCCCCCEECCCCCEEEECCHHHHHHHHHHEEEEECCEEEEECCCCCE
SVSWTPAAIGNFTVSAQAVDLAGNQALSEAAAIKVVEQSEKRHKLIGYWHNFVNGAGCPI
EEEECCHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCE
RLADMSNAWDVIDIAFAENDRNSNGTVHFNLYSGDIYSSCAPLDPLQFKQDMAALQAQGK
EEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHCCC
KFVLSLGGAEGTITLNTDQDEANFVSSLTELINEWGFDGLDVDLESGSNLVHGSQIQARL
EEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECHHHHHHH
GRALLQIEQNIGGDMYLTMAPEHPYVQGGMVAYSGIWGAYIPVINATRSTLDLLHVQLYN
HHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCHHHEEEEEEEEEC
NGGLPNPYLPGAAPEGSVDMMVAQSKMLIEGFELADGTRFEPLRDDQVAIGLPSGPSSAN
CCCCCCCCCCCCCCCCCEEEEEECCHHEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCC
SGQAPTQNILDALDCLTLGTKCSTVKPAFNYPNFGGVMTWSINWDKHDGFNFSKPVGDKL
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHH
TQMNAR
HHCCCC
>Mature Secondary Structure
MRVTLLSSALISALGVSYQAQAYNCQSLATWNSSEIYTSGSQVQKENQAFEAAYWTQGND
CEEEEHHHHHHHHHCCCEEECCCCCCEEECCCCCEEEECCHHHHHHCCCEEEEEEECCCC
PITNSGPWEAWKSLGQCDNGGGNLPPSITFSSPTNNAEIPEGAVITLLANASDEDGQVSQ
CCCCCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCEEE
VEFLAGTQLIAVVTQAPFETPWTAVKGTSQLTAIATDNEGATQSTNVNISVLPQGELAPP
EEEECCCEEEEEEECCCCCCCCCEECCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCC
TVSLTSPTGSETLSDKDSLIVSAQAADSDGIVTQVEFFIDNQSVFVDTNAPYEYLWNAVA
EEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCEEEEECCCCHHHHHHHHC
GTHTFKAQATDDANLTTMSQNVSLVVSGSHSGGCADAVPYLAGTRYEAGTLVSNLNQKYR
CCEEEEEECCCCCCEEEEECCEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHHCCCEEE
CDVAGWCSSDAAWAYEPGVGQYWQDAWSGLGACSTPPQITITSPNDGAVVLAGSSLTLSA
ECCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEECCEEEEEC
DASDADGSVTQVEFFANNSSLGVVTQPPYAQTWSATFVGANQLKAIATDNDNNVSESVVN
CCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCCEEEE
VTVSDQALVVTLTSPTAGQTVGLGKNVTLSADVTSLTSAIKQVDFVVNGSVIATDNSAPY
EEECCCEEEEEEECCCCCCEECCCCCEEEECCHHHHHHHHHHEEEEECCEEEEECCCCCE
SVSWTPAAIGNFTVSAQAVDLAGNQALSEAAAIKVVEQSEKRHKLIGYWHNFVNGAGCPI
EEEECCHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCE
RLADMSNAWDVIDIAFAENDRNSNGTVHFNLYSGDIYSSCAPLDPLQFKQDMAALQAQGK
EEECCCCCCCEEEEEEECCCCCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHCCC
KFVLSLGGAEGTITLNTDQDEANFVSSLTELINEWGFDGLDVDLESGSNLVHGSQIQARL
EEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECHHHHHHH
GRALLQIEQNIGGDMYLTMAPEHPYVQGGMVAYSGIWGAYIPVINATRSTLDLLHVQLYN
HHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCHHHEEEEEEEEEC
NGGLPNPYLPGAAPEGSVDMMVAQSKMLIEGFELADGTRFEPLRDDQVAIGLPSGPSSAN
CCCCCCCCCCCCCCCCCEEEEEECCHHEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCC
SGQAPTQNILDALDCLTLGTKCSTVKPAFNYPNFGGVMTWSINWDKHDGFNFSKPVGDKL
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCHHH
TQMNAR
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1729234 [H]