| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is yjgM [H]
Identifier: 27364854
GI number: 27364854
Start: 1457197
End: 1457691
Strand: Reverse
Name: yjgM [H]
Synonym: VV1_1470
Alternate gene names: 27364854
Gene position: 1457691-1457197 (Counterclockwise)
Preceding gene: 27364855
Following gene: 27364851
Centisome position: 44.42
GC content: 49.49
Gene sequence:
>495_bases ATGTCAGAAAAAATGGACTTTGTCTTGCGCCCTATCACCGTTGAAGACAACGCCTCAATCGCCAATGTGATTCGTCAAGT CTCGGCGGAGTATGGGTTAACCGCCGATAAAGGCTACAGTGTTGCCGATCCAACCCTAGACGATCTTTTTAGCATCTACT CACAAGCAAATGCCGCCTATTGGGTGGTGGAACATCAAGGGAAGATCGTCGGTGGAGGTGGCTTTTCTGCGCTAGCAGGG GTCGAAGGTGTCTGCGAGTTACAAAAAATGTACTTCTTACCCATTTGCCGTGGGCAGGGTCTGGCCAAGAAAATCGTTTC GCTCAGCCGCAGCGCCGCGAAAAAGATGGGTTATCAACGCTGTTACCTAGAAACCACTGCCTGCTTGAAAGAAGCCATTG CTCTGTATGAAAAGCTCGGATTTGAACATCTGCAAGCGCCACTCGGGCAAACCGGACATGACGCTTGTGAAGTGGTGATG ATTTGCCATTTATAA
Upstream 100 bases:
>100_bases GCGGCAAAACAAACCCTCGATTCGCACAGTTTTTGTTTGCACCCAACCGTGTAGTGACTCTATAGTTTTGACCATCATAA TTTGAAATACGATTGGTCTT
Downstream 100 bases:
>100_bases GGCAACTAGCGGACAAAGTGGGTAACCGAAATCGCCTCATCGAGCACAACGGGTGCGCTCAGCGTCTGACCATCAAGCTC AATCTCTAATTGATATGGTG
Product: Histone acetyltransferase HPA2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSEKMDFVLRPITVEDNASIANVIRQVSAEYGLTADKGYSVADPTLDDLFSIYSQANAAYWVVEHQGKIVGGGGFSALAG VEGVCELQKMYFLPICRGQGLAKKIVSLSRSAAKKMGYQRCYLETTACLKEAIALYEKLGFEHLQAPLGQTGHDACEVVM ICHL
Sequences:
>Translated_164_residues MSEKMDFVLRPITVEDNASIANVIRQVSAEYGLTADKGYSVADPTLDDLFSIYSQANAAYWVVEHQGKIVGGGGFSALAG VEGVCELQKMYFLPICRGQGLAKKIVSLSRSAAKKMGYQRCYLETTACLKEAIALYEKLGFEHLQAPLGQTGHDACEVVM ICHL >Mature_163_residues SEKMDFVLRPITVEDNASIANVIRQVSAEYGLTADKGYSVADPTLDDLFSIYSQANAAYWVVEHQGKIVGGGGFSALAGV EGVCELQKMYFLPICRGQGLAKKIVSLSRSAAKKMGYQRCYLETTACLKEAIALYEKLGFEHLQAPLGQTGHDACEVVMI CHL
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI48995002, Length=158, Percent_Identity=63.9240506329114, Blast_Score=186, Evalue=5e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 17844; Mature: 17713
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKMDFVLRPITVEDNASIANVIRQVSAEYGLTADKGYSVADPTLDDLFSIYSQANAAY CCCCCCCEEECEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEE WVVEHQGKIVGGGGFSALAGVEGVCELQKMYFLPICRGQGLAKKIVSLSRSAAKKMGYQR EEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHH CYLETTACLKEAIALYEKLGFEHLQAPLGQTGHDACEVVMICHL HHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHEECC >Mature Secondary Structure SEKMDFVLRPITVEDNASIANVIRQVSAEYGLTADKGYSVADPTLDDLFSIYSQANAAY CCCCCCEEECEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCEE WVVEHQGKIVGGGGFSALAGVEGVCELQKMYFLPICRGQGLAKKIVSLSRSAAKKMGYQR EEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHH CYLETTACLKEAIALYEKLGFEHLQAPLGQTGHDACEVVMICHL HHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8253666; 11677609 [H]