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The map label for this gene is galE [H]

Identifier: 27364741

GI number: 27364741

Start: 1326150

End: 1327160

Strand: Reverse

Name: galE [H]

Synonym: VV1_1342

Alternate gene names: 27364741

Gene position: 1327160-1326150 (Counterclockwise)

Preceding gene: 27364742

Following gene: 326423823

Centisome position: 40.44

GC content: 48.86

Gene sequence:

>1011_bases
ATGAACATACTGGTCACCGGTGGCAGCGGTTATATTGGCAGCCACACCTGTATTCAGATGATCGAAGCAGGAATGACGCC
CATCATTTTGGACAATCTTTATAACAGCAAATTGCTGGTACTCGATCGCATTGAACAGGTCACAGGCGTGCGCCCCACTT
TCTATCAAGGTGACATTCGTGACAGTGAGATTCTGCAACACGTCTTTGCTCAGCACGATATCCAGGGCGTCATCCACTTT
GCAGGCCTAAAGGCAGTAGGAGAATCGGTTGAAAAACCTCTGATGTATTATGATAACAATGTGTCAGGCACCCTAAATCT
TGTCCGAGAAATGGATAAAGCTGGTGTTAAGAGCCTTATTTTCAGTTCGTCAGCCACCGTCTATGGTGATCCCGCCTCCG
TACCAATCCGTGAAAATTTCCCAACCTCAGCCACCAACCCTTATGGGCGGAGCAAATTGATGGTGGAAGAGTGTCTGACC
GACTTCCACAAAGCCAATCCTGATTGGAGCATCACCCTGCTGCGTTATTTCAATCCCGTTGGCGCTCACGAGTCGGGTTT
GCTTGGTGAAGATCCTCAAGGCATTCCAAATAACTTATTGCCCTTTGTCGCTCAAGTTGCGGTTGGTCGACGCGAAAAAC
TGGGCGTATTTGGTGACGACTATCCAACACCAGATGGCACTGGGGTTCGTGATTACATTCACGTCATTGACCTTGCAGAC
GGTCATTTGGCGGCTTTGAATAAAGTGGGGCAGCAAGCAGGATTGCATATCTTTAACCTTGGTACCGGCCAAGGGAATAG
CGTACTTGAAATGGTCGCTGCTTTTGAAAAAGCGGCTCAGCGTCCTATTCCTTACGAAATCAAACCTCGCCGTGCCGGTG
ATATTGCTGAATGCTGGGCCGATCCTGCCTATGCGGAACAAGTATTGGGATGGAAAGCGACACGCTCACTAGAGACCATG
GTGGTAGATACTTGGCGTTGGCAATCCAACAACCCAAATGGCTATGAGTAA

Upstream 100 bases:

>100_bases
AATTTGGTTTTGCCCTATTCTGTTCATCGAGAATCTTTTCTAATAAACTCACAAAGTTAATTTGGCTAGATAATTGGAAA
TATAATTTCAGAGGACAACT

Downstream 100 bases:

>100_bases
TCGCCATCACTGACACGTTTTGCTGTATTGCTAACACAATAAGGGCGAGTGAGAACTCGCCTTTTGCTTGTGGGTACGTT
AGAAATAGAGGTCAGATTAA

Product: UDP-glucose 4-epimerase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MNILVTGGSGYIGSHTCIQMIEAGMTPIILDNLYNSKLLVLDRIEQVTGVRPTFYQGDIRDSEILQHVFAQHDIQGVIHF
AGLKAVGESVEKPLMYYDNNVSGTLNLVREMDKAGVKSLIFSSSATVYGDPASVPIRENFPTSATNPYGRSKLMVEECLT
DFHKANPDWSITLLRYFNPVGAHESGLLGEDPQGIPNNLLPFVAQVAVGRREKLGVFGDDYPTPDGTGVRDYIHVIDLAD
GHLAALNKVGQQAGLHIFNLGTGQGNSVLEMVAAFEKAAQRPIPYEIKPRRAGDIAECWADPAYAEQVLGWKATRSLETM
VVDTWRWQSNNPNGYE

Sequences:

>Translated_336_residues
MNILVTGGSGYIGSHTCIQMIEAGMTPIILDNLYNSKLLVLDRIEQVTGVRPTFYQGDIRDSEILQHVFAQHDIQGVIHF
AGLKAVGESVEKPLMYYDNNVSGTLNLVREMDKAGVKSLIFSSSATVYGDPASVPIRENFPTSATNPYGRSKLMVEECLT
DFHKANPDWSITLLRYFNPVGAHESGLLGEDPQGIPNNLLPFVAQVAVGRREKLGVFGDDYPTPDGTGVRDYIHVIDLAD
GHLAALNKVGQQAGLHIFNLGTGQGNSVLEMVAAFEKAAQRPIPYEIKPRRAGDIAECWADPAYAEQVLGWKATRSLETM
VVDTWRWQSNNPNGYE
>Mature_336_residues
MNILVTGGSGYIGSHTCIQMIEAGMTPIILDNLYNSKLLVLDRIEQVTGVRPTFYQGDIRDSEILQHVFAQHDIQGVIHF
AGLKAVGESVEKPLMYYDNNVSGTLNLVREMDKAGVKSLIFSSSATVYGDPASVPIRENFPTSATNPYGRSKLMVEECLT
DFHKANPDWSITLLRYFNPVGAHESGLLGEDPQGIPNNLLPFVAQVAVGRREKLGVFGDDYPTPDGTGVRDYIHVIDLAD
GHLAALNKVGQQAGLHIFNLGTGQGNSVLEMVAAFEKAAQRPIPYEIKPRRAGDIAECWADPAYAEQVLGWKATRSLETM
VVDTWRWQSNNPNGYE

Specific function: Galactose metabolism; third step. [C]

COG id: COG1087

COG function: function code M; UDP-glucose 4-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI56237023, Length=341, Percent_Identity=55.1319648093842, Blast_Score=399, Evalue=1e-111,
Organism=Homo sapiens, GI56118217, Length=341, Percent_Identity=55.1319648093842, Blast_Score=399, Evalue=1e-111,
Organism=Homo sapiens, GI189083684, Length=341, Percent_Identity=55.1319648093842, Blast_Score=399, Evalue=1e-111,
Organism=Homo sapiens, GI7657641, Length=352, Percent_Identity=26.1363636363636, Blast_Score=95, Evalue=8e-20,
Organism=Escherichia coli, GI1786974, Length=336, Percent_Identity=61.9047619047619, Blast_Score=441, Evalue=1e-125,
Organism=Escherichia coli, GI1788353, Length=363, Percent_Identity=24.7933884297521, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI48994969, Length=364, Percent_Identity=23.9010989010989, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71982035, Length=345, Percent_Identity=49.5652173913044, Blast_Score=357, Evalue=7e-99,
Organism=Caenorhabditis elegans, GI71982038, Length=347, Percent_Identity=49.2795389048991, Blast_Score=356, Evalue=1e-98,
Organism=Saccharomyces cerevisiae, GI6319493, Length=343, Percent_Identity=49.5626822157434, Blast_Score=337, Evalue=1e-93,
Organism=Drosophila melanogaster, GI19923002, Length=342, Percent_Identity=53.2163742690059, Blast_Score=375, Evalue=1e-104,
Organism=Drosophila melanogaster, GI21356223, Length=337, Percent_Identity=24.9258160237389, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR005886
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 36906; Mature: 36906

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILVTGGSGYIGSHTCIQMIEAGMTPIILDNLYNSKLLVLDRIEQVTGVRPTFYQGDIR
CEEEEECCCCCCCHHHHHHHHHHCCCEEEEHHCCCCEEHHHHHHHHHHCCCCCEEECCCC
DSEILQHVFAQHDIQGVIHFAGLKAVGESVEKPLMYYDNNVSGTLNLVREMDKAGVKSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHH
FSSSATVYGDPASVPIRENFPTSATNPYGRSKLMVEECLTDFHKANPDWSITLLRYFNPV
HCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHCCCC
GAHESGLLGEDPQGIPNNLLPFVAQVAVGRREKLGVFGDDYPTPDGTGVRDYIHVIDLAD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHEEEEECCC
GHLAALNKVGQQAGLHIFNLGTGQGNSVLEMVAAFEKAAQRPIPYEIKPRRAGDIAECWA
CHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHC
DPAYAEQVLGWKATRSLETMVVDTWRWQSNNPNGYE
CHHHHHHHHHHHHHCCHHEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MNILVTGGSGYIGSHTCIQMIEAGMTPIILDNLYNSKLLVLDRIEQVTGVRPTFYQGDIR
CEEEEECCCCCCCHHHHHHHHHHCCCEEEEHHCCCCEEHHHHHHHHHHCCCCCEEECCCC
DSEILQHVFAQHDIQGVIHFAGLKAVGESVEKPLMYYDNNVSGTLNLVREMDKAGVKSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHH
FSSSATVYGDPASVPIRENFPTSATNPYGRSKLMVEECLTDFHKANPDWSITLLRYFNPV
HCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHHHHCCCC
GAHESGLLGEDPQGIPNNLLPFVAQVAVGRREKLGVFGDDYPTPDGTGVRDYIHVIDLAD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCHHHHEEEEECCC
GHLAALNKVGQQAGLHIFNLGTGQGNSVLEMVAAFEKAAQRPIPYEIKPRRAGDIAECWA
CHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHC
DPAYAEQVLGWKATRSLETMVVDTWRWQSNNPNGYE
CHHHHHHHHHHHHHCCHHEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]