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The map label for this gene is prkB [H]

Identifier: 27364718

GI number: 27364718

Start: 1307018

End: 1307887

Strand: Reverse

Name: prkB [H]

Synonym: VV1_1319

Alternate gene names: 27364718

Gene position: 1307887-1307018 (Counterclockwise)

Preceding gene: 27364719

Following gene: 27364717

Centisome position: 39.85

GC content: 49.43

Gene sequence:

>870_bases
ATGTCTGCAAAACACCCAATAATAGCCGTCACAGGTTCATCCGGTGCCGGCACCACCACCACCTCCGAAGCTTTCCGCAA
GATGTTCAATATGATGAGCATCAAGCCCGCATGGGTCGAAGGGGATAGCTTCCACCGTTTTACCCGTCCAGAGATGGACG
TCGAAATTCGCAAGGCAAAAGAACAAGGCCGTCATATCAGCTATTTTGGCCCTCAAGCCAACGATTTCCCAGCTCTAGGC
GAATTTTTCCGCCAATACGGTAAATCTGGCACTGGTGAAGTGCGCCGCTATCTGCACACGTTTGACGAAGCGGTACCCTA
TAACCAAATGCCCGGCACTTTTACCCCATGGCAAAAGCTACCGGAAAATACCGATGTGCTGTTTTATGAAGGACTGCACG
GTGGCGTGGTGGATGGCGAAGTGAATGTCGCGCAACACGTCGATTTCTTGATAGGCATGGTGCCGATCGTCAACTTAGAG
TGGATACAGAAATACGTGCGAGATACCCGAGATCGCGGCCATTCACGCGAGGCCGTGATGGATTCGATTGTGCGCTCAAT
GGATGACTATCTGAATTACATCACACCGCAATTTTCTCGTACTCACATCAACTTTCAGCGAGTTCCAACGGTCGACACCT
CCAATCCGCTCAACGCCAAAGGCATCCCAAGCCTTGATGAAAGCTTTGTGGTGATTCGTCTTAGAGGAATCAAAAACGTT
GATTTTCCATACCTACTGGCGATGATCGATGGCTCGTTCATGTCACGCCACAACACCCTTGTGGTGCCGGGAGGAAAAAT
GAGTTTTGCTATGGAATTAATTGTGCAGCCTATCCTGCAACAATTGATTGAAACGGGCAAAATTGGATAA

Upstream 100 bases:

>100_bases
CATGACAAGCAAAGTGAACGTGCTATAGTGGGACAAACGATTGCTCCGCGGGAGGCCGATTCCCGCTCAACAGGTAAGTT
TGAATACGACAAGGTCTGTC

Downstream 100 bases:

>100_bases
AAACTCAGCACGGAGAGCGATTACTTTTCATACCGTGATCATGTGCACAGTTTTGCTTAAAAAATCCGATACTCGGCACG
ATTAAAATCAAGAAATCGTT

Product: phosphoribulokinase

Products: NA

Alternate protein names: PRK; PRKase; Phosphopentokinase [H]

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MSAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMSIKPAWVEGDSFHRFTRPEMDVEIRKAKEQGRHISYFGPQANDFPALG
EFFRQYGKSGTGEVRRYLHTFDEAVPYNQMPGTFTPWQKLPENTDVLFYEGLHGGVVDGEVNVAQHVDFLIGMVPIVNLE
WIQKYVRDTRDRGHSREAVMDSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRLRGIKNV
DFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIVQPILQQLIETGKIG

Sequences:

>Translated_289_residues
MSAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMSIKPAWVEGDSFHRFTRPEMDVEIRKAKEQGRHISYFGPQANDFPALG
EFFRQYGKSGTGEVRRYLHTFDEAVPYNQMPGTFTPWQKLPENTDVLFYEGLHGGVVDGEVNVAQHVDFLIGMVPIVNLE
WIQKYVRDTRDRGHSREAVMDSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRLRGIKNV
DFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIVQPILQQLIETGKIG
>Mature_288_residues
SAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMSIKPAWVEGDSFHRFTRPEMDVEIRKAKEQGRHISYFGPQANDFPALGE
FFRQYGKSGTGEVRRYLHTFDEAVPYNQMPGTFTPWQKLPENTDVLFYEGLHGGVVDGEVNVAQHVDFLIGMVPIVNLEW
IQKYVRDTRDRGHSREAVMDSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRLRGIKNVD
FPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIVQPILQQLIETGKIG

Specific function: Unknown

COG id: COG3954

COG function: function code C; Phosphoribulokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoribulokinase family [H]

Homologues:

Organism=Escherichia coli, GI2367214, Length=288, Percent_Identity=73.9583333333333, Blast_Score=454, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006082
- InterPro:   IPR006083 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.19 [H]

Molecular weight: Translated: 32654; Mature: 32523

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMSIKPAWVEGDSFHRFTRPEMDVEIRKAK
CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHH
EQGRHISYFGPQANDFPALGEFFRQYGKSGTGEVRRYLHTFDEAVPYNQMPGTFTPWQKL
HCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC
PENTDVLFYEGLHGGVVDGEVNVAQHVDFLIGMVPIVNLEWIQKYVRDTRDRGHSREAVM
CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH
DSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRLRGIKNV
HHHHHHHHHHHHHHCCCCCCEEECEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIVQPILQQLIETGKIG
CHHHHHHHHCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAKHPIIAVTGSSGAGTTTTSEAFRKMFNMMSIKPAWVEGDSFHRFTRPEMDVEIRKAK
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHH
EQGRHISYFGPQANDFPALGEFFRQYGKSGTGEVRRYLHTFDEAVPYNQMPGTFTPWQKL
HCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHC
PENTDVLFYEGLHGGVVDGEVNVAQHVDFLIGMVPIVNLEWIQKYVRDTRDRGHSREAVM
CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHH
DSIVRSMDDYLNYITPQFSRTHINFQRVPTVDTSNPLNAKGIPSLDESFVVIRLRGIKNV
HHHHHHHHHHHHHHCCCCCCEEECEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DFPYLLAMIDGSFMSRHNTLVVPGGKMSFAMELIVQPILQQLIETGKIG
CHHHHHHHHCCHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1756168; 7940673; 7984428; 7920643 [H]