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The map label for this gene is mcp4 [H]

Identifier: 27364632

GI number: 27364632

Start: 1208671

End: 1210311

Strand: Reverse

Name: mcp4 [H]

Synonym: VV1_1230

Alternate gene names: 27364632

Gene position: 1210311-1208671 (Counterclockwise)

Preceding gene: 27364633

Following gene: 27364630

Centisome position: 36.88

GC content: 52.16

Gene sequence:

>1641_bases
ATGGTCGGTTCTAGCTTGCGCGTCATTAACATCAAACAGCGACTTTATGTACTCACCTTCGTGATTACATCACTATTGCT
GCTTCCATTTATCGCTCTGCTCTACGCCTATCAAAGTGATTTGATGGAAGCCAAGCAGGTCAAAACACGCCACTTGGTCG
AAGCGGCCGTGAGTTTGCAGCAGCACTATTATCAGCAAGAACAAGCCGGGCGCTTGTCTCGCGAAGAGGCGCAAACGCAA
GCCAAGGCGGCCATTAGCCAGCTGCGCTATGAAAAAGAAGATTACTTTTGGATTAACGATGATCAGCCCAATATGATCAT
GCACCCGATGAAACCGCAACTGAACGGCAAGAGTTTAAGCGCAGTGAAAGATCCGACTGGCAAGGCGCTGTTTGTTGAAA
TGGTTTCGGTGGCAAAAACATCCGGGGCTGGCTTTGTCCATTACATGTGGCCAAAGCCGGGTTCAGACGTCGATGTGGAA
AAAGTCTCTTATGTGCAAATGTTCCAGCCGTGGGGTTGGATTACCGGCAGTGGCGTTTATATCGATGATGTCGAAGCGCT
GGTGTGGCAGCGTATTCGCGCCTCCCTTCTCCAGTTGAGCCTTACAGGCGCAGTGATGTTGTTACTGGCTGGCTGGATAG
GCAACAGCATTACCCAGCCTTGTAGAGCGACGCAGCGCGCTTTAGAGGATATTGCACAAGGAGATGGCGACCTGACCAAG
CAACTGCCTGCCGACGGCCAAGATGAGTTAGCACAAATCGCCCGTGCGTTTAACCAATTCACCAGCAAGATCCGCCTCAT
CGTACAAGGCATTGCCCCTGTCACACGTGATGTCACCGGCTCTGCCTCTGAGCTGACCCAAGTGGCAAGAAATGCACTCG
AAAAAGCCACCGCCCAGCAGCACTCGGTCGATTCCGTTGCCAGTGCCATGAAGCAACTGCACGACAGCAATATGCAAGTG
GCCGATTCGGCTCAAGAGGCAGCCAGTGCAGCGCAGACTGCCGCAGAGAAAGGCAAAGAAGGCAGTGCCATCATTGAAAA
AGCCTCTGGCTACATGCATGCCTTGTCACACACCGTGACCCAAACAGAGCTCAATGTGCAAGAGCTAGCCAAAGAAACCC
AAAAAGTAGGCTCAGTGTTGGAAGTTATCCGGGGTGTGGCCGAGCAAACCAATTTACTTGCGCTCAACGCTGCAATAGAA
GCCGCCCGAGCGGGTGAGCAAGGCCGTGGCTTTGCAGTGGTCGCTGACGAAGTACGCACATTGGCTACGCGCACCAGCAG
CAGTACCGATGAAATTCAACACATCATCGCGCAGTTGCAACAACGCGCCAACGATGTCTGTTTATCGATGGAACAAACAC
AGCGTCAATCCACCGAAACCCAACAACAAGCCAGCTTGGCACAGCAAGCCCTAAGTGATATCGATGCGCAAATTGCTGTG
ATTCTGCAGCTCAACCAGCACATTGCTCTTGCCAGCGGAGAGCAAACATCGGCCACTGAGCTCATTAACCACAATCTGCT
GCAAATTGTCGATCACAGTGAACAAACGGCAGCACAAGCCAATCAAGTCGCTGCAGCGAGCGAGCAGTTGATGGCTAGCG
GTAACCAATTGCAAGTCAACTTTGCTGCGTTCAAGGTGTAA

Upstream 100 bases:

>100_bases
CTCGCCTTTCGTCGCATATACGAAGCTGTTATCAATTTGTTACATTGAAAAAACAATAACAATCAACAAATGTTTCCCAA
CCCTTCAAGGAGTGATTGGT

Downstream 100 bases:

>100_bases
CGCCAATAGAATGAGCAAACTTACGATCGGCTTAGGTCATTAATGGCCTAAGCCGTCTGTTATTCTAAAGCAGCAAGAAT
GGAACAGTGGCTGGCATTGT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MVGSSLRVINIKQRLYVLTFVITSLLLLPFIALLYAYQSDLMEAKQVKTRHLVEAAVSLQQHYYQQEQAGRLSREEAQTQ
AKAAISQLRYEKEDYFWINDDQPNMIMHPMKPQLNGKSLSAVKDPTGKALFVEMVSVAKTSGAGFVHYMWPKPGSDVDVE
KVSYVQMFQPWGWITGSGVYIDDVEALVWQRIRASLLQLSLTGAVMLLLAGWIGNSITQPCRATQRALEDIAQGDGDLTK
QLPADGQDELAQIARAFNQFTSKIRLIVQGIAPVTRDVTGSASELTQVARNALEKATAQQHSVDSVASAMKQLHDSNMQV
ADSAQEAASAAQTAAEKGKEGSAIIEKASGYMHALSHTVTQTELNVQELAKETQKVGSVLEVIRGVAEQTNLLALNAAIE
AARAGEQGRGFAVVADEVRTLATRTSSSTDEIQHIIAQLQQRANDVCLSMEQTQRQSTETQQQASLAQQALSDIDAQIAV
ILQLNQHIALASGEQTSATELINHNLLQIVDHSEQTAAQANQVAAASEQLMASGNQLQVNFAAFKV

Sequences:

>Translated_546_residues
MVGSSLRVINIKQRLYVLTFVITSLLLLPFIALLYAYQSDLMEAKQVKTRHLVEAAVSLQQHYYQQEQAGRLSREEAQTQ
AKAAISQLRYEKEDYFWINDDQPNMIMHPMKPQLNGKSLSAVKDPTGKALFVEMVSVAKTSGAGFVHYMWPKPGSDVDVE
KVSYVQMFQPWGWITGSGVYIDDVEALVWQRIRASLLQLSLTGAVMLLLAGWIGNSITQPCRATQRALEDIAQGDGDLTK
QLPADGQDELAQIARAFNQFTSKIRLIVQGIAPVTRDVTGSASELTQVARNALEKATAQQHSVDSVASAMKQLHDSNMQV
ADSAQEAASAAQTAAEKGKEGSAIIEKASGYMHALSHTVTQTELNVQELAKETQKVGSVLEVIRGVAEQTNLLALNAAIE
AARAGEQGRGFAVVADEVRTLATRTSSSTDEIQHIIAQLQQRANDVCLSMEQTQRQSTETQQQASLAQQALSDIDAQIAV
ILQLNQHIALASGEQTSATELINHNLLQIVDHSEQTAAQANQVAAASEQLMASGNQLQVNFAAFKV
>Mature_546_residues
MVGSSLRVINIKQRLYVLTFVITSLLLLPFIALLYAYQSDLMEAKQVKTRHLVEAAVSLQQHYYQQEQAGRLSREEAQTQ
AKAAISQLRYEKEDYFWINDDQPNMIMHPMKPQLNGKSLSAVKDPTGKALFVEMVSVAKTSGAGFVHYMWPKPGSDVDVE
KVSYVQMFQPWGWITGSGVYIDDVEALVWQRIRASLLQLSLTGAVMLLLAGWIGNSITQPCRATQRALEDIAQGDGDLTK
QLPADGQDELAQIARAFNQFTSKIRLIVQGIAPVTRDVTGSASELTQVARNALEKATAQQHSVDSVASAMKQLHDSNMQV
ADSAQEAASAAQTAAEKGKEGSAIIEKASGYMHALSHTVTQTELNVQELAKETQKVGSVLEVIRGVAEQTNLLALNAAIE
AARAGEQGRGFAVVADEVRTLATRTSSSTDEIQHIIAQLQQRANDVCLSMEQTQRQSTETQQQASLAQQALSDIDAQIAV
ILQLNQHIALASGEQTSATELINHNLLQIVDHSEQTAAQANQVAAASEQLMASGNQLQVNFAAFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=339, Percent_Identity=30.6784660766962, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI2367378, Length=233, Percent_Identity=34.7639484978541, Blast_Score=119, Evalue=7e-28,
Organism=Escherichia coli, GI1788195, Length=208, Percent_Identity=33.6538461538462, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1787690, Length=350, Percent_Identity=28.8571428571429, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1789453, Length=316, Percent_Identity=29.1139240506329, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013163
- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF08269 Cache_2; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59477; Mature: 59477

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGSSLRVINIKQRLYVLTFVITSLLLLPFIALLYAYQSDLMEAKQVKTRHLVEAAVSLQ
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHYYQQEQAGRLSREEAQTQAKAAISQLRYEKEDYFWINDDQPNMIMHPMKPQLNGKSLS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEECCCCCCCCCCCCC
AVKDPTGKALFVEMVSVAKTSGAGFVHYMWPKPGSDVDVEKVSYVQMFQPWGWITGSGVY
CCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCEE
IDDVEALVWQRIRASLLQLSLTGAVMLLLAGWIGNSITQPCRATQRALEDIAQGDGDLTK
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHH
QLPADGQDELAQIARAFNQFTSKIRLIVQGIAPVTRDVTGSASELTQVARNALEKATAQQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
HSVDSVASAMKQLHDSNMQVADSAQEAASAAQTAAEKGKEGSAIIEKASGYMHALSHTVT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
QTELNVQELAKETQKVGSVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRT
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHH
LATRTSSSTDEIQHIIAQLQQRANDVCLSMEQTQRQSTETQQQASLAQQALSDIDAQIAV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILQLNQHIALASGEQTSATELINHNLLQIVDHSEQTAAQANQVAAASEQLMASGNQLQVN
EEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
FAAFKV
EEEECC
>Mature Secondary Structure
MVGSSLRVINIKQRLYVLTFVITSLLLLPFIALLYAYQSDLMEAKQVKTRHLVEAAVSLQ
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHYYQQEQAGRLSREEAQTQAKAAISQLRYEKEDYFWINDDQPNMIMHPMKPQLNGKSLS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEECCCCCCCCCCCCC
AVKDPTGKALFVEMVSVAKTSGAGFVHYMWPKPGSDVDVEKVSYVQMFQPWGWITGSGVY
CCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCEE
IDDVEALVWQRIRASLLQLSLTGAVMLLLAGWIGNSITQPCRATQRALEDIAQGDGDLTK
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHH
QLPADGQDELAQIARAFNQFTSKIRLIVQGIAPVTRDVTGSASELTQVARNALEKATAQQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
HSVDSVASAMKQLHDSNMQVADSAQEAASAAQTAAEKGKEGSAIIEKASGYMHALSHTVT
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
QTELNVQELAKETQKVGSVLEVIRGVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRT
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHH
LATRTSSSTDEIQHIIAQLQQRANDVCLSMEQTQRQSTETQQQASLAQQALSDIDAQIAV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILQLNQHIALASGEQTSATELINHNLLQIVDHSEQTAAQANQVAAASEQLMASGNQLQVN
EEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
FAAFKV
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]