Definition Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence.
Accession NC_004459
Length 3,281,866

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The map label for this gene is 27364553

Identifier: 27364553

GI number: 27364553

Start: 1134248

End: 1135798

Strand: Reverse

Name: 27364553

Synonym: VV1_1134

Alternate gene names: NA

Gene position: 1135798-1134248 (Counterclockwise)

Preceding gene: 27364555

Following gene: 27364552

Centisome position: 34.61

GC content: 52.35

Gene sequence:

>1551_bases
ATGAAGGCGTTTAAAAACCCAGTCGCCCTATCGACACTGTTGCTGTTACAAGCGTGTTCAACCAGCGCCCCCGTCGCCAC
TCAATCTGCTCCTGTGCTGCCAACGGCCAATCTCAGCCAGCCAGAGTCGGTGATCGCACAGAGCTTTATGCTGTCAGGCA
GTTTGGTCGTCGGCCATGAAGCACAATACATCACACCTTGCGGCAGTACGCAGCAATATTGGCTACAGCTAAGTGCTCAG
CAACGTCAGCAATTGATGGCGCTGACCAGCCTGCCCTATCAGTCCATGTATGGCGAAGTGATCGGCCATTTAAAAACCAC
CGGTGATGAAGGTTTTGCTTCGGAATACGATGCGTTGTTTGTGGTGGAGCAACTCAACTTAGTCGATGCCAGCAACCCAA
CCCGCTGCGAGCAAGCCGCTCGCCCAACGCAAGCATTTGGTAATGAGCCCAACTGGCGTATCGATTTTGCTGCCAATCAG
CTGACCATCAAGCAACTGAGCAAACAAGAGCAAACGCGTGTGATTAGCCGCAGCCAACTCAGCCCCCGAAAACGCGAGTA
TCAGTTTGATGACGGCCAATTGCTCCTCAGCGAAAATTTGTGCAAAGACACCATGAGCAACAGCCTTTACGGATGGAAAG
CAACGCTTGACTGGCAAGATACCCAGCTATCTGGCTGTGCCACCACCTCGAACATCGATGCCACGCTCGGTTGGGGTGGT
TTGTACACAGCCACCTCAACCCAATCTTCCGGTTTTAGCGTGCACATGCAGCTCAACGCAGACCACAGCGCTGAAACGCG
TTATCTCTATGCCAATGAAGAGCGTCCTTTGGTGGAAAAAGGCTACTGGCAGCAACTCAATCCCAACCAGATCCAAGTCG
TGATGACGCATCATCAGGGGCAAAAATTAGTCACCGAACGCATTTTCACCCGCACGGGCTCACAGCTGAAAGCGGACAAG
GAAAAAGTCGGCAAGGTGGTCTATCCGATTGCTCAAGGGGGGCTGATTTTGTATCCCGCCGCCGCAGGTGAAATGATGAG
TGACACTCCCATCACCACTCAAACTGCCGTTCCCACAGACACCCGTAACGTAGCCTCCAGCGCGGAGTTTCGTCGCGATG
TTGATCAGGCAATACGTGAGTATTTTCGTCTGCACAAAACCGATCCAAGCAATAACCAATACCGCTGGCTAACGTACGAT
CTCAATGGAGATGGCAAAGAAGAACTGCTGGCGCAATTGGATTGGTGCGGCTCGGGTGGCTGTACCCTGCTGATTTTTGA
AAATCATCAAGAAACTTGGCGCTTCAATAGCCGCATTACCTTGGTGAACACACCGATTTACCTCGGCAATCAACGCAACC
ACGGCTGGCAAGATCTTATCTTCAACGTCAGTGGCGGCGGCGCCAAAGCTCAGTCACACCTGATGCAATATGATGGTATT
AGCTATCCACTCAATCCGAGCGTTGCGCCTGTCGCGCTTGGTGAGCAGATCAGTCAGGTAGAACTGTTTTCTGATGGCAT
CAGCCCGGTACGCGAAGGAGTGAAACTGTGA

Upstream 100 bases:

>100_bases
ACGCGTAAAGTGTCGATAGAAAAGGTGTCCGGTTCAGTTTTAAACAACCAATATGCCATAATGCGGTCCAAGCAGATTTA
GAGATGGAGAAAGATATAAC

Downstream 100 bases:

>100_bases
AGCCACAAGCCTGCCCTCAGTGTGGGCTGCGTTATCAATGCTTGTGTGACCAGTTTCCATCACTGCAAAGTGAGGTCGCA
CTGGTGCTATTGATGCACCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MKAFKNPVALSTLLLLQACSTSAPVATQSAPVLPTANLSQPESVIAQSFMLSGSLVVGHEAQYITPCGSTQQYWLQLSAQ
QRQQLMALTSLPYQSMYGEVIGHLKTTGDEGFASEYDALFVVEQLNLVDASNPTRCEQAARPTQAFGNEPNWRIDFAANQ
LTIKQLSKQEQTRVISRSQLSPRKREYQFDDGQLLLSENLCKDTMSNSLYGWKATLDWQDTQLSGCATTSNIDATLGWGG
LYTATSTQSSGFSVHMQLNADHSAETRYLYANEERPLVEKGYWQQLNPNQIQVVMTHHQGQKLVTERIFTRTGSQLKADK
EKVGKVVYPIAQGGLILYPAAAGEMMSDTPITTQTAVPTDTRNVASSAEFRRDVDQAIREYFRLHKTDPSNNQYRWLTYD
LNGDGKEELLAQLDWCGSGGCTLLIFENHQETWRFNSRITLVNTPIYLGNQRNHGWQDLIFNVSGGGAKAQSHLMQYDGI
SYPLNPSVAPVALGEQISQVELFSDGISPVREGVKL

Sequences:

>Translated_516_residues
MKAFKNPVALSTLLLLQACSTSAPVATQSAPVLPTANLSQPESVIAQSFMLSGSLVVGHEAQYITPCGSTQQYWLQLSAQ
QRQQLMALTSLPYQSMYGEVIGHLKTTGDEGFASEYDALFVVEQLNLVDASNPTRCEQAARPTQAFGNEPNWRIDFAANQ
LTIKQLSKQEQTRVISRSQLSPRKREYQFDDGQLLLSENLCKDTMSNSLYGWKATLDWQDTQLSGCATTSNIDATLGWGG
LYTATSTQSSGFSVHMQLNADHSAETRYLYANEERPLVEKGYWQQLNPNQIQVVMTHHQGQKLVTERIFTRTGSQLKADK
EKVGKVVYPIAQGGLILYPAAAGEMMSDTPITTQTAVPTDTRNVASSAEFRRDVDQAIREYFRLHKTDPSNNQYRWLTYD
LNGDGKEELLAQLDWCGSGGCTLLIFENHQETWRFNSRITLVNTPIYLGNQRNHGWQDLIFNVSGGGAKAQSHLMQYDGI
SYPLNPSVAPVALGEQISQVELFSDGISPVREGVKL
>Mature_516_residues
MKAFKNPVALSTLLLLQACSTSAPVATQSAPVLPTANLSQPESVIAQSFMLSGSLVVGHEAQYITPCGSTQQYWLQLSAQ
QRQQLMALTSLPYQSMYGEVIGHLKTTGDEGFASEYDALFVVEQLNLVDASNPTRCEQAARPTQAFGNEPNWRIDFAANQ
LTIKQLSKQEQTRVISRSQLSPRKREYQFDDGQLLLSENLCKDTMSNSLYGWKATLDWQDTQLSGCATTSNIDATLGWGG
LYTATSTQSSGFSVHMQLNADHSAETRYLYANEERPLVEKGYWQQLNPNQIQVVMTHHQGQKLVTERIFTRTGSQLKADK
EKVGKVVYPIAQGGLILYPAAAGEMMSDTPITTQTAVPTDTRNVASSAEFRRDVDQAIREYFRLHKTDPSNNQYRWLTYD
LNGDGKEELLAQLDWCGSGGCTLLIFENHQETWRFNSRITLVNTPIYLGNQRNHGWQDLIFNVSGGGAKAQSHLMQYDGI
SYPLNPSVAPVALGEQISQVELFSDGISPVREGVKL

Specific function: Unknown

COG id: COG3650

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57284; Mature: 57284

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFKNPVALSTLLLLQACSTSAPVATQSAPVLPTANLSQPESVIAQSFMLSGSLVVGHE
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECC
AQYITPCGSTQQYWLQLSAQQRQQLMALTSLPYQSMYGEVIGHLKTTGDEGFASEYDALF
CEEEECCCCCHHHHEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VVEQLNLVDASNPTRCEQAARPTQAFGNEPNWRIDFAANQLTIKQLSKQEQTRVISRSQL
EEEEEEEECCCCCCHHHHHCCCHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC
SPRKREYQFDDGQLLLSENLCKDTMSNSLYGWKATLDWQDTQLSGCATTSNIDATLGWGG
CCHHHCCCCCCCCEEECHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECCCCCEEECCCC
LYTATSTQSSGFSVHMQLNADHSAETRYLYANEERPLVEKGYWQQLNPNQIQVVMTHHQG
EEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHCCCCCCCCCCEEEEEEEECCC
QKLVTERIFTRTGSQLKADKEKVGKVVYPIAQGGLILYPAAAGEMMSDTPITTQTAVPTD
HHHHHHHHHHHCCCHHHHCHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCEECCCCCC
TRNVASSAEFRRDVDQAIREYFRLHKTDPSNNQYRWLTYDLNGDGKEELLAQLDWCGSGG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCC
CTLLIFENHQETWRFNSRITLVNTPIYLGNQRNHGWQDLIFNVSGGGAKAQSHLMQYDGI
EEEEEECCCCCCEEECCEEEEEECCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
SYPLNPSVAPVALGEQISQVELFSDGISPVREGVKL
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MKAFKNPVALSTLLLLQACSTSAPVATQSAPVLPTANLSQPESVIAQSFMLSGSLVVGHE
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECC
AQYITPCGSTQQYWLQLSAQQRQQLMALTSLPYQSMYGEVIGHLKTTGDEGFASEYDALF
CEEEECCCCCHHHHEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VVEQLNLVDASNPTRCEQAARPTQAFGNEPNWRIDFAANQLTIKQLSKQEQTRVISRSQL
EEEEEEEECCCCCCHHHHHCCCHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCC
SPRKREYQFDDGQLLLSENLCKDTMSNSLYGWKATLDWQDTQLSGCATTSNIDATLGWGG
CCHHHCCCCCCCCEEECHHHHHHHHHCCCEEEEEEECCCCCCCCCCEECCCCCEEECCCC
LYTATSTQSSGFSVHMQLNADHSAETRYLYANEERPLVEKGYWQQLNPNQIQVVMTHHQG
EEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCHHCCCCCCCCCCEEEEEEEECCC
QKLVTERIFTRTGSQLKADKEKVGKVVYPIAQGGLILYPAAAGEMMSDTPITTQTAVPTD
HHHHHHHHHHHCCCHHHHCHHHHCCEEEEECCCCEEEEECCCCCCCCCCCCCEECCCCCC
TRNVASSAEFRRDVDQAIREYFRLHKTDPSNNQYRWLTYDLNGDGKEELLAQLDWCGSGG
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCCC
CTLLIFENHQETWRFNSRITLVNTPIYLGNQRNHGWQDLIFNVSGGGAKAQSHLMQYDGI
EEEEEECCCCCCEEECCEEEEEECCEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHCCC
SYPLNPSVAPVALGEQISQVELFSDGISPVREGVKL
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA