| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27364467
Identifier: 27364467
GI number: 27364467
Start: 1038038
End: 1039012
Strand: Reverse
Name: 27364467
Synonym: VV1_1034
Alternate gene names: NA
Gene position: 1039012-1038038 (Counterclockwise)
Preceding gene: 27364469
Following gene: 27364465
Centisome position: 31.66
GC content: 48.31
Gene sequence:
>975_bases ATGGCTCAAGGATCTGCAATGGAAAACCGAATCTTAATCACCACCGCACTGATATTCAGTCATATGGCGCAAGCAGGACT GAGTGACACCGCAGGGTTTAGTGGGGAAATCTCACTACTGACTGGCTATGGCGCCTCTCAGTCACACTTTAATACGGAAA CGGATGCAACCATCAGCAACTACTCAAGCAGCGCCAGCCGCGAAGGTGCCGCTCTGTTTGCACCATTGGGGAACATCGCT TACACCTTTGGTCAGCAGCTCGAACAGCAGTTTTACCTCGGTACCGCAAGAGAGGACATCGCTGTTGGTACCCTGGCCTT TGAGTTAGGTTATCAATACCAATTGAGCTCTGGCGTGGTGATTGATTTTTCATTGTTGCCAACCGTGATGTCTGGAGAAA CTTGGCAAGATCCTTATCTGCTCAACCAAAAACGCACGGTCACCGATGAAAGTGGTATTGCGTACCGACTGCAGTTTCAC AACCTCTGGGGTGGCAATGTTAACCTCGACACCGCATATGGCACCAAAGAACTGGATAAAGACACCATCACCGATCCAAG CCTCAAACGTGATGGAGAGAGTTATTACGCCAAACTGGATTACCGCTACCGACTCAAACCCACCAGCTTTGTTCAGCCAG CTGTGGTTTACTTAAAGCATCAAGCAGATGGCAAAGCGGCCTCTTATGATTCACTCGGGGCTGAAGTGAGTTGGTTTAAT CTGTTTGCTAAGCACCGCTTAGTTCTGACCGCGGGTTATAAAGTGCAAGATTATCAAGCCGCCAGTCAACTGTTTGGCAA AACGCGTGAAGACCAGCAGCTCAGCCTATTTCTTGCTTATGAGTATGCCCAACTTTTCTCTTCCCCCGATTGGTCTTTCG TTGCTCTGGCTGGGTACAACCAAACCGACTCCAATATCGAGTTTTACGAGCAGAGTGATTACTTACTTTCTGTTGGCGTA AACTACAAGTTTTAA
Upstream 100 bases:
>100_bases GCGTGTAATTATACTGCTCCCGGCCCAGTTTGGAATCTTTGTCAAAATGGTCAGATTAGTTTGTGACCGAAACTGTGGCA AACCACCCTCGTCAGGATGA
Downstream 100 bases:
>100_bases CTCATCGCCAAGGCGGTTTAATCTAAGGTTTACCACGATTAAACCGCTTGCAGAGTGAGCTGTTTGAGCAAGCGATCCAT CGCCCGATAACCGAGTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MAQGSAMENRILITTALIFSHMAQAGLSDTAGFSGEISLLTGYGASQSHFNTETDATISNYSSSASREGAALFAPLGNIA YTFGQQLEQQFYLGTAREDIAVGTLAFELGYQYQLSSGVVIDFSLLPTVMSGETWQDPYLLNQKRTVTDESGIAYRLQFH NLWGGNVNLDTAYGTKELDKDTITDPSLKRDGESYYAKLDYRYRLKPTSFVQPAVVYLKHQADGKAASYDSLGAEVSWFN LFAKHRLVLTAGYKVQDYQAASQLFGKTREDQQLSLFLAYEYAQLFSSPDWSFVALAGYNQTDSNIEFYEQSDYLLSVGV NYKF
Sequences:
>Translated_324_residues MAQGSAMENRILITTALIFSHMAQAGLSDTAGFSGEISLLTGYGASQSHFNTETDATISNYSSSASREGAALFAPLGNIA YTFGQQLEQQFYLGTAREDIAVGTLAFELGYQYQLSSGVVIDFSLLPTVMSGETWQDPYLLNQKRTVTDESGIAYRLQFH NLWGGNVNLDTAYGTKELDKDTITDPSLKRDGESYYAKLDYRYRLKPTSFVQPAVVYLKHQADGKAASYDSLGAEVSWFN LFAKHRLVLTAGYKVQDYQAASQLFGKTREDQQLSLFLAYEYAQLFSSPDWSFVALAGYNQTDSNIEFYEQSDYLLSVGV NYKF >Mature_323_residues AQGSAMENRILITTALIFSHMAQAGLSDTAGFSGEISLLTGYGASQSHFNTETDATISNYSSSASREGAALFAPLGNIAY TFGQQLEQQFYLGTAREDIAVGTLAFELGYQYQLSSGVVIDFSLLPTVMSGETWQDPYLLNQKRTVTDESGIAYRLQFHN LWGGNVNLDTAYGTKELDKDTITDPSLKRDGESYYAKLDYRYRLKPTSFVQPAVVYLKHQADGKAASYDSLGAEVSWFNL FAKHRLVLTAGYKVQDYQAASQLFGKTREDQQLSLFLAYEYAQLFSSPDWSFVALAGYNQTDSNIEFYEQSDYLLSVGVN YKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36026; Mature: 35895
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQGSAMENRILITTALIFSHMAQAGLSDTAGFSGEISLLTGYGASQSHFNTETDATISN CCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHC YSSSASREGAALFAPLGNIAYTFGQQLEQQFYLGTAREDIAVGTLAFELGYQYQLSSGVV CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEEECCEEEECCCEE IDFSLLPTVMSGETWQDPYLLNQKRTVTDESGIAYRLQFHNLWGGNVNLDTAYGTKELDK EEEEHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCC DTITDPSLKRDGESYYAKLDYRYRLKPTSFVQPAVVYLKHQADGKAASYDSLGAEVSWFN CCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEHHHH LFAKHRLVLTAGYKVQDYQAASQLFGKTREDQQLSLFLAYEYAQLFSSPDWSFVALAGYN HHHHCEEEEEECCEEEHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHCCCCCCEEEEECCC QTDSNIEFYEQSDYLLSVGVNYKF CCCCCEEEEECCCEEEEECCCCCC >Mature Secondary Structure AQGSAMENRILITTALIFSHMAQAGLSDTAGFSGEISLLTGYGASQSHFNTETDATISN CCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHC YSSSASREGAALFAPLGNIAYTFGQQLEQQFYLGTAREDIAVGTLAFELGYQYQLSSGVV CCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEEEEECCEEEECCCEE IDFSLLPTVMSGETWQDPYLLNQKRTVTDESGIAYRLQFHNLWGGNVNLDTAYGTKELDK EEEEHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCC DTITDPSLKRDGESYYAKLDYRYRLKPTSFVQPAVVYLKHQADGKAASYDSLGAEVSWFN CCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCEEHHHH LFAKHRLVLTAGYKVQDYQAASQLFGKTREDQQLSLFLAYEYAQLFSSPDWSFVALAGYN HHHHCEEEEEECCEEEHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHCCCCCCEEEEECCC QTDSNIEFYEQSDYLLSVGVNYKF CCCCCEEEEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA