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The map label for this gene is yejB [H]

Identifier: 27364289

GI number: 27364289

Start: 848270

End: 849295

Strand: Reverse

Name: yejB [H]

Synonym: VV1_0841

Alternate gene names: 27364289

Gene position: 849295-848270 (Counterclockwise)

Preceding gene: 27364305

Following gene: 326423777

Centisome position: 25.88

GC content: 46.0

Gene sequence:

>1026_bases
ATGCTGTCATATTTTCTGCGCCGACTGGCGCTGGTCATTCCTACTTTCCTAGGAATTACTATTCTTATCTTTGCTATTAC
CCGTTTTGTTCCTGGTGGTCCAGTGGAACGCATGCTGTCTAAAATGCAGGCACAAGGCGACGGTGCTGCGGCCATGACCA
CTGCCGGGGGCAACTCGGCACTGTCTGAAGAGCAAATGGCGGAACTCAATGCCTTTTATGGTTTGGATAAACCTGTTGCA
CAGGCGTATTTGGATTGGCTAAGCAAGCTGGTTAGGTTAGATTTCGGCGAGTCCACTCGCTATTACGAACCGGTGGGAGA
CATGATCGCAGAGCGTCTTCCGGTTTCCCTCTTCTACGGTGGAATGACCTTTTTTATCAGTTACTTCATTTCTATTCCAC
TGGGCTATTACAAAGCGCTTCGGCATGGTTCGGTTTTTGATTCCGCCTCGTCGATTCTAATTTTTGTTGGCTATGCGCTG
CCCGGTTATGTGGTGGGTGTTCTGCTGATCACACTCTTTTCCTACCATTTGGAATGGTTCCCGATGGGGGGCTTTGTCGG
CGATGATTTTGATGATTTGGAGACGTTTTTTGAGCGTGCGAAAGACGTCATGTGGCACGCGGTATTGCCACTTATCTGTT
ATTTGATTGGTGACTTTGCCACGTTGACATTGACGATGAAAAATAACCTGATGGAGAACTTGTCATCGGATTATATTCGT
ACCGCAATCGCCAAAGGCTTGCCGTTTAAAACGGCAGTACGCAAACACGCTTTACGAAATAGTTTAATTCCTATCGCGAG
CCATTTTGGTAATTCCTTACTCTTCTTTATGACTGGTGCGTTCTTAATTGAGGTTATTTTCAATATCGATGGCATAGGCT
TATTAGGCTATGAGTCGATCATTGAGCGTGATTATCCTGTTGTAATGGGTATTGTGGCAATTAATGCGGTGCTTCTCCTG
CTAGGAAATATCATTTCCGATGTTTGTGTTGCGCTGGTCGATCCTCGTGTGAAGTTTGGAGCTTAA

Upstream 100 bases:

>100_bases
ATTTCAATTAAGTTCCTAATTCTCTAGATAAGTTAGAATTTGATTATTTATTAATTTAACAAACTCTAATTTATAGGCAG
TCGACATGGAGTAGTTGTAT

Downstream 100 bases:

>100_bases
TATGATCAAAGTGAGTCCGTTAACTCAAAAGAAAATAAGAAGCTTCAAGGCGATCAAGCGTGGCTATTGGTCTTTCATTC
TTCTTTCTGCAATGTTGGTG

Product: ABC transporter permease

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MLSYFLRRLALVIPTFLGITILIFAITRFVPGGPVERMLSKMQAQGDGAAAMTTAGGNSALSEEQMAELNAFYGLDKPVA
QAYLDWLSKLVRLDFGESTRYYEPVGDMIAERLPVSLFYGGMTFFISYFISIPLGYYKALRHGSVFDSASSILIFVGYAL
PGYVVGVLLITLFSYHLEWFPMGGFVGDDFDDLETFFERAKDVMWHAVLPLICYLIGDFATLTLTMKNNLMENLSSDYIR
TAIAKGLPFKTAVRKHALRNSLIPIASHFGNSLLFFMTGAFLIEVIFNIDGIGLLGYESIIERDYPVVMGIVAINAVLLL
LGNIISDVCVALVDPRVKFGA

Sequences:

>Translated_341_residues
MLSYFLRRLALVIPTFLGITILIFAITRFVPGGPVERMLSKMQAQGDGAAAMTTAGGNSALSEEQMAELNAFYGLDKPVA
QAYLDWLSKLVRLDFGESTRYYEPVGDMIAERLPVSLFYGGMTFFISYFISIPLGYYKALRHGSVFDSASSILIFVGYAL
PGYVVGVLLITLFSYHLEWFPMGGFVGDDFDDLETFFERAKDVMWHAVLPLICYLIGDFATLTLTMKNNLMENLSSDYIR
TAIAKGLPFKTAVRKHALRNSLIPIASHFGNSLLFFMTGAFLIEVIFNIDGIGLLGYESIIERDYPVVMGIVAINAVLLL
LGNIISDVCVALVDPRVKFGA
>Mature_341_residues
MLSYFLRRLALVIPTFLGITILIFAITRFVPGGPVERMLSKMQAQGDGAAAMTTAGGNSALSEEQMAELNAFYGLDKPVA
QAYLDWLSKLVRLDFGESTRYYEPVGDMIAERLPVSLFYGGMTFFISYFISIPLGYYKALRHGSVFDSASSILIFVGYAL
PGYVVGVLLITLFSYHLEWFPMGGFVGDDFDDLETFFERAKDVMWHAVLPLICYLIGDFATLTLTMKNNLMENLSSDYIR
TAIAKGLPFKTAVRKHALRNSLIPIASHFGNSLLFFMTGAFLIEVIFNIDGIGLLGYESIIERDYPVVMGIVAINAVLLL
LGNIISDVCVALVDPRVKFGA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=38.121546961326, Blast_Score=241, Evalue=4e-65,
Organism=Escherichia coli, GI1789965, Length=353, Percent_Identity=33.4277620396601, Blast_Score=186, Evalue=1e-48,
Organism=Escherichia coli, GI1787497, Length=340, Percent_Identity=29.7058823529412, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1789888, Length=338, Percent_Identity=27.810650887574, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1787053, Length=340, Percent_Identity=27.9411764705882, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI1787761, Length=337, Percent_Identity=29.080118694362, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787550, Length=270, Percent_Identity=22.5925925925926, Blast_Score=98, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37715; Mature: 37715

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure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HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]