Click here to switch to the map view.

The map label for this gene is ubiX [C]

Identifier: 27364160

GI number: 27364160

Start: 721913

End: 722557

Strand: Reverse

Name: ubiX [C]

Synonym: VV1_0705

Alternate gene names: 27364160

Gene position: 722557-721913 (Counterclockwise)

Preceding gene: 27364161

Following gene: 326423753

Centisome position: 22.02

GC content: 52.25

Gene sequence:

>645_bases
ATGAGCATGACAAACCAAGAAAAATCGATCACGTTAGCCTTTACGGGCGCCTCTGGCGCGCCTTATGGGTTACGTTTATT
ACAGCAATTACTGGCGGCAGACTACCGCGTCTACCTGCTGATCTCTTCTGCGGCAAGAGTGGTATTGGCAACCGAGCATG
GTCTCAAGCTTCCAGCCAATCCTGACGCAGCGCAGCAAGCGCTAGTGAAGCATCTGGGTTGTCCTGCCGACAAGCTGGTG
GTGTGTGGTAAAGACGATTGGTTTTCGCCAGTGGCTTCTGGCTCGGCTGCCCCTAAGCAGATGGTGGTTTGCCCTTGCTC
GGCAGGGAGTGTGGCGGCGATTGCTCATGGTATGTCGGATAATTTAATTGAGCGTGCTGCGGATGTGGTAATGAAAGAGC
GTGGCCAATTGATTTTAGTGGTGCGTGAAACGCCCTTTTCGACCTTGCATCTTGAAAACATGCACAAGCTTTCTCAGCTC
GGGGTCACCATCATGCCCGCCGCGCCCGGTTTCTATCATCAACCGCAGTCGATAGACGATCTGATTGATTTTATGGTCGC
GCGTATCTTAGATCATCTCGGCATTGAACAGGTTTTGGTGCCACGTTGGGGATACGATCATCGCAATGACGGTGACTCTG
TATAG

Upstream 100 bases:

>100_bases
ACGCAAATTTTGGTCATGAGCAATGGCGGTTTTGAAGGCATTCACGGCAAATTACTGACCGCTTTAGAGAGTTCAACGCG
CTAGAAAAGACACACATTAG

Downstream 100 bases:

>100_bases
CCAAGAGAGATCATTCCGATTACAATCCGAACCACTCATCGGGGCGCTTAACTGTGGTGTTTTATTGCATCGCAGTGGCT
GAGACTAGGCAAAGGCCTAG

Product: aromatic acid decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSMTNQEKSITLAFTGASGAPYGLRLLQQLLAADYRVYLLISSAARVVLATEHGLKLPANPDAAQQALVKHLGCPADKLV
VCGKDDWFSPVASGSAAPKQMVVCPCSAGSVAAIAHGMSDNLIERAADVVMKERGQLILVVRETPFSTLHLENMHKLSQL
GVTIMPAAPGFYHQPQSIDDLIDFMVARILDHLGIEQVLVPRWGYDHRNDGDSV

Sequences:

>Translated_214_residues
MSMTNQEKSITLAFTGASGAPYGLRLLQQLLAADYRVYLLISSAARVVLATEHGLKLPANPDAAQQALVKHLGCPADKLV
VCGKDDWFSPVASGSAAPKQMVVCPCSAGSVAAIAHGMSDNLIERAADVVMKERGQLILVVRETPFSTLHLENMHKLSQL
GVTIMPAAPGFYHQPQSIDDLIDFMVARILDHLGIEQVLVPRWGYDHRNDGDSV
>Mature_213_residues
SMTNQEKSITLAFTGASGAPYGLRLLQQLLAADYRVYLLISSAARVVLATEHGLKLPANPDAAQQALVKHLGCPADKLVV
CGKDDWFSPVASGSAAPKQMVVCPCSAGSVAAIAHGMSDNLIERAADVVMKERGQLILVVRETPFSTLHLENMHKLSQLG
VTIMPAAPGFYHQPQSIDDLIDFMVARILDHLGIEQVLVPRWGYDHRNDGDSV

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=199, Percent_Identity=39.6984924623116, Blast_Score=132, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6320746, Length=202, Percent_Identity=38.6138613861386, Blast_Score=129, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 23084; Mature: 22953

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMTNQEKSITLAFTGASGAPYGLRLLQQLLAADYRVYLLISSAARVVLATEHGLKLPAN
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCCCC
PDAAQQALVKHLGCPADKLVVCGKDDWFSPVASGSAAPKQMVVCPCSAGSVAAIAHGMSD
CCHHHHHHHHHHCCCHHHEEEECCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHCCCCH
NLIERAADVVMKERGQLILVVRETPFSTLHLENMHKLSQLGVTIMPAAPGFYHQPQSIDD
HHHHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHHHHHCCEEEEECCCCCCCCCCCHHH
LIDFMVARILDHLGIEQVLVPRWGYDHRNDGDSV
HHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SMTNQEKSITLAFTGASGAPYGLRLLQQLLAADYRVYLLISSAARVVLATEHGLKLPAN
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCCCCCC
PDAAQQALVKHLGCPADKLVVCGKDDWFSPVASGSAAPKQMVVCPCSAGSVAAIAHGMSD
CCHHHHHHHHHHCCCHHHEEEECCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHCCCCH
NLIERAADVVMKERGQLILVVRETPFSTLHLENMHKLSQLGVTIMPAAPGFYHQPQSIDD
HHHHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHHHHHCCEEEEECCCCCCCCCCCHHH
LIDFMVARILDHLGIEQVLVPRWGYDHRNDGDSV
HHHHHHHHHHHHCCHHHEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]