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The map label for this gene is 27363843

Identifier: 27363843

GI number: 27363843

Start: 357862

End: 358365

Strand: Reverse

Name: 27363843

Synonym: VV1_0374

Alternate gene names: NA

Gene position: 358365-357862 (Counterclockwise)

Preceding gene: 326423698

Following gene: 27363839

Centisome position: 10.92

GC content: 45.04

Gene sequence:

>504_bases
ATGAGTAAAGAGCTAACAAACGAGCAATTGCAAGCGCTTCTACAGTCACCAGACCTAGCTGAAAAGCTTGCCTCACTGGG
GGGCGATGCTGTTCAAGCATTCACTAAAGCAGCGACAGAAGCTGTCCAAGTGCAGAAAGAGAAGCAAGAGGCTGAGCGCA
AGCAAAAGATCGAAGACTTGATTGATAGCATTGAGCGCGATTTAGAAGAAGAGTCTATCTCGAAAGAAGAGTTTGCTTTA
GCTATTGCTGCTCGCTTTAAAGTGAGTGTTGCAGCTCGCACTAGAAGCACAAAGACTAGCAATAACAAAGAGAGAAAGAA
CGCACCGACACGTCCACAATACCGCATTGTTTTAGATGACGAAGAGCACGTCTGGTCTGGTAAAGGACGCTCTCCAGAAG
TTTTCAGAGCTGCAAAAGAGAGCGGTGAGCTAGATAACTACAGAATGAGCGAAGAAGAAGTTAAAGATTACATGCTTGCT
CATCCCGAAAAGTACGGTTTATAA

Upstream 100 bases:

>100_bases
TTACATGGTGATTACTGATTATTTTTAAATGAGAGCTTTATTTGCTCTTTGATTTACTTTAAATTATACACATTGAAGTT
CAAAAGTAGACACTAAAACA

Downstream 100 bases:

>100_bases
TCACCATACAAAAAAGCCAGCTCGATGAGCTGGCTTTTTAATATCTTGCATCTTACATATACATCTCAAGAATCGGCTTA
AACGTCTCTTCTCGCTTCTC

Product: DNA-binding protein H-NS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSKELTNEQLQALLQSPDLAEKLASLGGDAVQAFTKAATEAVQVQKEKQEAERKQKIEDLIDSIERDLEEESISKEEFAL
AIAARFKVSVAARTRSTKTSNNKERKNAPTRPQYRIVLDDEEHVWSGKGRSPEVFRAAKESGELDNYRMSEEEVKDYMLA
HPEKYGL

Sequences:

>Translated_167_residues
MSKELTNEQLQALLQSPDLAEKLASLGGDAVQAFTKAATEAVQVQKEKQEAERKQKIEDLIDSIERDLEEESISKEEFAL
AIAARFKVSVAARTRSTKTSNNKERKNAPTRPQYRIVLDDEEHVWSGKGRSPEVFRAAKESGELDNYRMSEEEVKDYMLA
HPEKYGL
>Mature_166_residues
SKELTNEQLQALLQSPDLAEKLASLGGDAVQAFTKAATEAVQVQKEKQEAERKQKIEDLIDSIERDLEEESISKEEFALA
IAARFKVSVAARTRSTKTSNNKERKNAPTRPQYRIVLDDEEHVWSGKGRSPEVFRAAKESGELDNYRMSEEEVKDYMLAH
PEKYGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18914; Mature: 18783

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKELTNEQLQALLQSPDLAEKLASLGGDAVQAFTKAATEAVQVQKEKQEAERKQKIEDL
CCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDSIERDLEEESISKEEFALAIAARFKVSVAARTRSTKTSNNKERKNAPTRPQYRIVLDD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEEEEECC
EEHVWSGKGRSPEVFRAAKESGELDNYRMSEEEVKDYMLAHPEKYGL
CHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHCCC
>Mature Secondary Structure 
SKELTNEQLQALLQSPDLAEKLASLGGDAVQAFTKAATEAVQVQKEKQEAERKQKIEDL
CCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDSIERDLEEESISKEEFALAIAARFKVSVAARTRSTKTSNNKERKNAPTRPQYRIVLDD
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCEEEEECC
EEHVWSGKGRSPEVFRAAKESGELDNYRMSEEEVKDYMLAHPEKYGL
CHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA