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The map label for this gene is yccT [C]

Identifier: 27363719

GI number: 27363719

Start: 228166

End: 228756

Strand: Reverse

Name: yccT [C]

Synonym: VV1_0237

Alternate gene names: 27363719

Gene position: 228756-228166 (Counterclockwise)

Preceding gene: 27363720

Following gene: 27363718

Centisome position: 6.97

GC content: 44.84

Gene sequence:

>591_bases
ATGAAAAAAATGATGATTCTGAGTGCGCTAGCACTATTTAGCAGCTCACTGTTCGCTGCCAACCTGACGCTGCAGAAGGA
AATTACGCCACAAATCGTCAATGGTGAAGGCGTGACGCTTCAAGAAGTGCATAATGGCAATCGCATCGAATTAAAACCGG
GCCACAATCAGATTGCGGTGACGATTGGACAAATTGTTTTTGAAGATGGCAAACGCCGCAAATTTGATTCACAACCATTA
TTGCTTGAGTTTGTCGCCAAGCCAGAACAAGCGCTGACACTAAAGTATGGCAAGTTCCGTACGATTGACGACGCGAAAAA
ATTTGAAAACAACCCAACGGTGCACTTGACGGATGCTCAAGGAAATCCGGTCGCATTTACCATGGTTCAGCTCTATAAAG
GTGGCCTGCAAGGGTTTCGTGATTACGAACGAGAAGTCGCAGATTACAACGCGCAGAAAGCACAAAAGGCGGACAGCGCA
CCACTCGTTAATCACGATCCAAAAGCAATGGATCTTAAAACTGCATTTAAAGAAATGACTCGACAAGAGCAGCAAGCCTT
TATGCAATGGGCAATGCAAAACTTAAAATAG

Upstream 100 bases:

>100_bases
TACACTGAGTTCTCAGTGGGTGTTGAATACTACTTCTAACTCGTTAGAAATCAAGAAAGGGCGGCAACGCCCTTTCTTCG
TTGATAAGTGGAACTGAAAT

Downstream 100 bases:

>100_bases
TTTTCTTCTTTCCTTCGTTTAACAAGCGAAAAATCGAATTCCACCCTCAATGTGATAAACACATTGAGGGCATGTGTTTT
TGGGATAGCCTGAGCGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKKMMILSALALFSSSLFAANLTLQKEITPQIVNGEGVTLQEVHNGNRIELKPGHNQIAVTIGQIVFEDGKRRKFDSQPL
LLEFVAKPEQALTLKYGKFRTIDDAKKFENNPTVHLTDAQGNPVAFTMVQLYKGGLQGFRDYEREVADYNAQKAQKADSA
PLVNHDPKAMDLKTAFKEMTRQEQQAFMQWAMQNLK

Sequences:

>Translated_196_residues
MKKMMILSALALFSSSLFAANLTLQKEITPQIVNGEGVTLQEVHNGNRIELKPGHNQIAVTIGQIVFEDGKRRKFDSQPL
LLEFVAKPEQALTLKYGKFRTIDDAKKFENNPTVHLTDAQGNPVAFTMVQLYKGGLQGFRDYEREVADYNAQKAQKADSA
PLVNHDPKAMDLKTAFKEMTRQEQQAFMQWAMQNLK
>Mature_196_residues
MKKMMILSALALFSSSLFAANLTLQKEITPQIVNGEGVTLQEVHNGNRIELKPGHNQIAVTIGQIVFEDGKRRKFDSQPL
LLEFVAKPEQALTLKYGKFRTIDDAKKFENNPTVHLTDAQGNPVAFTMVQLYKGGLQGFRDYEREVADYNAQKAQKADSA
PLVNHDPKAMDLKTAFKEMTRQEQQAFMQWAMQNLK

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y237_VIBVU (Q8DFH4)

Other databases:

- EMBL:   AE016795
- RefSeq:   NP_759247.1
- GeneID:   1177190
- GenomeReviews:   AE016795_GR
- KEGG:   vvu:VV1_0237
- HOGENOM:   HBG625683
- OMA:   YEREVAD
- ProtClustDB:   CLSK909818
- BioCyc:   VVUL216895:VV1_0237-MONOMER
- HAMAP:   MF_00789
- InterPro:   IPR018635

Pfam domain/function: PF09829 DUF2057

EC number: NA

Molecular weight: Translated: 22144; Mature: 22144

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMMILSALALFSSSLFAANLTLQKEITPQIVNGEGVTLQEVHNGNRIELKPGHNQIAV
CCHHHHHHHHHHHHCCHHHCCEEEECCCCCEEECCCCCEEEEECCCCEEEECCCCCEEEE
TIGQIVFEDGKRRKFDSQPLLLEFVAKPEQALTLKYGKFRTIDDAKKFENNPTVHLTDAQ
EEHHHHHCCCCCCCCCCCCHHHHHHCCCCHHEEEECCCCCCCCHHHHCCCCCCEEEECCC
GNPVAFTMVQLYKGGLQGFRDYEREVADYNAQKAQKADSAPLVNHDPKAMDLKTAFKEMT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
RQEQQAFMQWAMQNLK
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKMMILSALALFSSSLFAANLTLQKEITPQIVNGEGVTLQEVHNGNRIELKPGHNQIAV
CCHHHHHHHHHHHHCCHHHCCEEEECCCCCEEECCCCCEEEEECCCCEEEECCCCCEEEE
TIGQIVFEDGKRRKFDSQPLLLEFVAKPEQALTLKYGKFRTIDDAKKFENNPTVHLTDAQ
EEHHHHHCCCCCCCCCCCCHHHHHHCCCCHHEEEECCCCCCCCHHHHCCCCCCEEEECCC
GNPVAFTMVQLYKGGLQGFRDYEREVADYNAQKAQKADSAPLVNHDPKAMDLKTAFKEMT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
RQEQQAFMQWAMQNLK
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA