| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
Click here to switch to the map view.
The map label for this gene is 27363602
Identifier: 27363602
GI number: 27363602
Start: 107174
End: 107869
Strand: Reverse
Name: 27363602
Synonym: VV1_0119
Alternate gene names: NA
Gene position: 107869-107174 (Counterclockwise)
Preceding gene: 27363603
Following gene: 27363601
Centisome position: 3.29
GC content: 50.0
Gene sequence:
>696_bases ATGTGCAGCTCAATCTCAAAATATCTCGATGTACTCAAAGATCACCAGGTCACCGCTCAAGGGGTGGGGGCTCGGCATAG AGATATCCCCCTGCTTGCAGAGGGGGGACGGTACCTAGAAAACTGCACCAAATTAGAACTCTCACTAAGTGCGCCTGAGC TTGAAAAAGCCTTCGCATGCTTAGCATTGCCTGAGCATTGGGCAGAGATACAACGCCATCTCGGAGCGCTGAAGTTTTTA GAGCTTTGGCGAGGCCTTGAAACGCTGCGCACTGGCCATCGACTAAGAATCAACGTGGCGCGTATGAGTAGTGACCACCT CGAAATGTCTGATGACGACTTTGAACTGTGGCTAGATGCTCAACGCCTATCTAAGCCCTGGTTCGAGGTCTATTACACGA CGACAACCGAGCAGTATCGGTATATTTGGCAAACGCTTTATCAAGCGGCTTATCACCCTGGGCGCCGCACCCTGCGCATT TACGTGCCGAGCTTTAATTTCTGGAACAAGCATTTAAAGCGTGTGCTGATGTTCAACCTTTTGGCCGCAGGCATGCCAAA AGATAAAGTTTCGCACCACTTGTTACTCTGGACTGGGCAATCTGCCTCTCTCACCCGAATCAACCTTGCTTCTAAGCTGC TAGCAGAAATGACTCCCTCCTTTCAAGAAACAAAATCGGGCGAAATGGCGTTATGA
Upstream 100 bases:
>100_bases TCACTAGCTGCACATACTGACAGATTGTGCAGTTCATCAGTTTACTGTGGTGCCCGAGCCTTTGTGTTTACTGGATTCAG TTTTCATGAAGGATTAGGGA
Downstream 100 bases:
>100_bases AACAGAATAATCAGCCTAAATCCATGGTTACATTCAAGTGCAATACCTGCGAATACACCTTCAAAAGCGAACCAACCCGC ATTGAAGATGAGCCCAATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MCSSISKYLDVLKDHQVTAQGVGARHRDIPLLAEGGRYLENCTKLELSLSAPELEKAFACLALPEHWAEIQRHLGALKFL ELWRGLETLRTGHRLRINVARMSSDHLEMSDDDFELWLDAQRLSKPWFEVYYTTTTEQYRYIWQTLYQAAYHPGRRTLRI YVPSFNFWNKHLKRVLMFNLLAAGMPKDKVSHHLLLWTGQSASLTRINLASKLLAEMTPSFQETKSGEMAL
Sequences:
>Translated_231_residues MCSSISKYLDVLKDHQVTAQGVGARHRDIPLLAEGGRYLENCTKLELSLSAPELEKAFACLALPEHWAEIQRHLGALKFL ELWRGLETLRTGHRLRINVARMSSDHLEMSDDDFELWLDAQRLSKPWFEVYYTTTTEQYRYIWQTLYQAAYHPGRRTLRI YVPSFNFWNKHLKRVLMFNLLAAGMPKDKVSHHLLLWTGQSASLTRINLASKLLAEMTPSFQETKSGEMAL >Mature_231_residues MCSSISKYLDVLKDHQVTAQGVGARHRDIPLLAEGGRYLENCTKLELSLSAPELEKAFACLALPEHWAEIQRHLGALKFL ELWRGLETLRTGHRLRINVARMSSDHLEMSDDDFELWLDAQRLSKPWFEVYYTTTTEQYRYIWQTLYQAAYHPGRRTLRI YVPSFNFWNKHLKRVLMFNLLAAGMPKDKVSHHLLLWTGQSASLTRINLASKLLAEMTPSFQETKSGEMAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26766; Mature: 26766
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSSISKYLDVLKDHQVTAQGVGARHRDIPLLAEGGRYLENCTKLELSLSAPELEKAFAC CCCHHHHHHHHHHCCCCHHHCCCCCCCCCCEEECCCHHHHHHHEEEEEECCCHHHHHHHH LALPEHWAEIQRHLGALKFLELWRGLETLRTGHRLRINVARMSSDHLEMSDDDFELWLDA HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHEEEEH QRLSKPWFEVYYTTTTEQYRYIWQTLYQAAYHPGRRTLRIYVPSFNFWNKHLKRVLMFNL HHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHH LAAGMPKDKVSHHLLLWTGQSASLTRINLASKLLAEMTPSFQETKSGEMAL HHCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCC >Mature Secondary Structure MCSSISKYLDVLKDHQVTAQGVGARHRDIPLLAEGGRYLENCTKLELSLSAPELEKAFAC CCCHHHHHHHHHHCCCCHHHCCCCCCCCCCEEECCCHHHHHHHEEEEEECCCHHHHHHHH LALPEHWAEIQRHLGALKFLELWRGLETLRTGHRLRINVARMSSDHLEMSDDDFELWLDA HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHEEEEH QRLSKPWFEVYYTTTTEQYRYIWQTLYQAAYHPGRRTLRIYVPSFNFWNKHLKRVLMFNL HHHCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHH LAAGMPKDKVSHHLLLWTGQSASLTRINLASKLLAEMTPSFQETKSGEMAL HHCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA