| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27363598
Identifier: 27363598
GI number: 27363598
Start: 102151
End: 103239
Strand: Reverse
Name: 27363598
Synonym: VV1_0114
Alternate gene names: NA
Gene position: 103239-102151 (Counterclockwise)
Preceding gene: 27363599
Following gene: 27363597
Centisome position: 3.15
GC content: 50.69
Gene sequence:
>1089_bases ATGGCAGTCAATCAACGCACACAAGTTAAAGCGACTATCCGCAGAGCGATGCAGGCAGCGCAGCGTGCTACCAATGAGCT GGATGCGCAAGCCATGCAGGATCTCACCGATCTCTATCAGGCGGCACTGGTCGAAATCCAGTTTCTGATTAGCCACGCGG CCGATGAATTAGGTCAAGTTCGACTTTCCCAGTTACATACCCTCACTAGGCAGATAGAGGAGATTCTCAACCAAGTAAAC CAAAAGCAATCGAGCATGGTGGAAGGGTATATTGTCGAAGCGGCCAAAAACGGTGGGAACACGTTCAGCAGCAGTATTCC TGCCGCAAAAGTTTCTGAGTCGATTGATGCTGCCGTTCTGGCAACCCGAACCATGCAGCAGAAAGATGGGTTACAACTGA GTGACCGCCTTTGGCGGGTTCATCGCAACGCAAAACAAGAGCTAACCAACGCGGTGGAACGCGCCGTTATCCTCGGCCAG TCAGCATCCGAAGCCGCGCAGGATTATCAGCGCCGCATGCAGCCTGTTCCGTCCCATATTGCTCAGCAAATGACTATGGC CAGCAGCTCTGGAATCAATAAAAAGGTCAGTGATGTGCTCATGGAAGATCAAGGTGCACCGTATCACCAAATCAAGCGAG TGATGAGAACGGAGATTAACCGAGCCTACGGCATGGCGTTTCAGAACTCTGCTTTTGAAGATGAGTTTGTAGTGGGGACT AAGTTCAAGCTAAGCCCGAACCATCCCAAAAGGGATATCTGCGATATGCACGCCATGGCAAATCTTTATGGCCTTGGCCG TGGCGTATACCCACGAGGTAAAAGCCCGTGGCCAGCGCATCCTAACACCTTGAGTTATGAGCAAGTGGTGTTTGTTGATG AAGTGACGGAAGAAGACAAAGCAGATGCAACAACACGAATTGATTGGCTGAAAAGCCAAAGCCAGGCGACACAGAAAGCG GTGCTAGGGCACAACAAGAAAGTATCCGCTTTACAACAAGGCCACTTAACCCAAGGGATGATTGCGACCCCTTGGAAGCA CCTAGAGCCAGTGCTGAAACGAAAAGGCATTGATACTACAAACCTGTGA
Upstream 100 bases:
>100_bases TCGATGACGAGGACAATAAGCCGGCGCATAAAGTCAGCATCACTCCAAACAATCAGCCGAAAGGTGAAAGTGCAACGTCC ATCAGCAACGGGTAATACTC
Downstream 100 bases:
>100_bases ATAACTTGCCCCCTGTTTTCCACGTAGCAAGCTTTATAATACATACGTCAGTTAAAAGTAGGACTGGAAATAACCAGCCA ACGCTAGGAGCTAATAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MAVNQRTQVKATIRRAMQAAQRATNELDAQAMQDLTDLYQAALVEIQFLISHAADELGQVRLSQLHTLTRQIEEILNQVN QKQSSMVEGYIVEAAKNGGNTFSSSIPAAKVSESIDAAVLATRTMQQKDGLQLSDRLWRVHRNAKQELTNAVERAVILGQ SASEAAQDYQRRMQPVPSHIAQQMTMASSSGINKKVSDVLMEDQGAPYHQIKRVMRTEINRAYGMAFQNSAFEDEFVVGT KFKLSPNHPKRDICDMHAMANLYGLGRGVYPRGKSPWPAHPNTLSYEQVVFVDEVTEEDKADATTRIDWLKSQSQATQKA VLGHNKKVSALQQGHLTQGMIATPWKHLEPVLKRKGIDTTNL
Sequences:
>Translated_362_residues MAVNQRTQVKATIRRAMQAAQRATNELDAQAMQDLTDLYQAALVEIQFLISHAADELGQVRLSQLHTLTRQIEEILNQVN QKQSSMVEGYIVEAAKNGGNTFSSSIPAAKVSESIDAAVLATRTMQQKDGLQLSDRLWRVHRNAKQELTNAVERAVILGQ SASEAAQDYQRRMQPVPSHIAQQMTMASSSGINKKVSDVLMEDQGAPYHQIKRVMRTEINRAYGMAFQNSAFEDEFVVGT KFKLSPNHPKRDICDMHAMANLYGLGRGVYPRGKSPWPAHPNTLSYEQVVFVDEVTEEDKADATTRIDWLKSQSQATQKA VLGHNKKVSALQQGHLTQGMIATPWKHLEPVLKRKGIDTTNL >Mature_361_residues AVNQRTQVKATIRRAMQAAQRATNELDAQAMQDLTDLYQAALVEIQFLISHAADELGQVRLSQLHTLTRQIEEILNQVNQ KQSSMVEGYIVEAAKNGGNTFSSSIPAAKVSESIDAAVLATRTMQQKDGLQLSDRLWRVHRNAKQELTNAVERAVILGQS ASEAAQDYQRRMQPVPSHIAQQMTMASSSGINKKVSDVLMEDQGAPYHQIKRVMRTEINRAYGMAFQNSAFEDEFVVGTK FKLSPNHPKRDICDMHAMANLYGLGRGVYPRGKSPWPAHPNTLSYEQVVFVDEVTEEDKADATTRIDWLKSQSQATQKAV LGHNKKVSALQQGHLTQGMIATPWKHLEPVLKRKGIDTTNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40374; Mature: 40243
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVNQRTQVKATIRRAMQAAQRATNELDAQAMQDLTDLYQAALVEIQFLISHAADELGQV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSQLHTLTRQIEEILNQVNQKQSSMVEGYIVEAAKNGGNTFSSSIPAAKVSESIDAAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ATRTMQQKDGLQLSDRLWRVHRNAKQELTNAVERAVILGQSASEAAQDYQRRMQPVPSHI HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH AQQMTMASSSGINKKVSDVLMEDQGAPYHQIKRVMRTEINRAYGMAFQNSAFEDEFVVGT HHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECE KFKLSPNHPKRDICDMHAMANLYGLGRGVYPRGKSPWPAHPNTLSYEQVVFVDEVTEEDK EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHCCCHH ADATTRIDWLKSQSQATQKAVLGHNKKVSALQQGHLTQGMIATPWKHLEPVLKRKGIDTT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC NL CC >Mature Secondary Structure AVNQRTQVKATIRRAMQAAQRATNELDAQAMQDLTDLYQAALVEIQFLISHAADELGQV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSQLHTLTRQIEEILNQVNQKQSSMVEGYIVEAAKNGGNTFSSSIPAAKVSESIDAAVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH ATRTMQQKDGLQLSDRLWRVHRNAKQELTNAVERAVILGQSASEAAQDYQRRMQPVPSHI HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHH AQQMTMASSSGINKKVSDVLMEDQGAPYHQIKRVMRTEINRAYGMAFQNSAFEDEFVVGT HHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECE KFKLSPNHPKRDICDMHAMANLYGLGRGVYPRGKSPWPAHPNTLSYEQVVFVDEVTEEDK EEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHCCCHH ADATTRIDWLKSQSQATQKAVLGHNKKVSALQQGHLTQGMIATPWKHLEPVLKRKGIDTT HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCC NL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA