| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27363591
Identifier: 27363591
GI number: 27363591
Start: 96279
End: 98855
Strand: Reverse
Name: 27363591
Synonym: VV1_0107
Alternate gene names: NA
Gene position: 98855-96279 (Counterclockwise)
Preceding gene: 27363592
Following gene: 27363590
Centisome position: 3.01
GC content: 50.02
Gene sequence:
>2577_bases ATGAATCAAAGACAATTGTTAAAAGCCTCTGGCGTTTTGGTACTGGGTGCAACCACAACACAAGGGGTGATTCATCTCTT ATCTGATGCGGTCAAGGTGGATACCGGAGCCGCAAAACGCAGTGTTGTCACGATTACCCGAACCGGCAGATTTAATGATC CACGTTACGGCGAATTTGAACTGACCCAGAGCATGTTCGATTCCATGATCAAAAACTTTAACGATGGGGTTTATGGTCAG GAGATCTTTATCGACATCGCGCATAAGCCAGAAGATGGCGCAGGGGCGGTGGTGAAACGCCTGTTTACCGACCGTGGACG TTTACGTGCAGAGGTGGAGTGGTTCGAACTCGGCATTAATAAAGTCACCAAAGAAGGCTTTAAGTACTTATCCGCCGAAA TACATCTCAACTATGTCAGCAACGAGGCCGGAACCAATGGCCAATATTCTGAGTTTGGCCCAACCCTGCTAGGTGCAGGT TTGGTCACGCGTCCATGTATCAAAAACCTAGACCAGATCGAACTCAGTGAAGCCTGCCTTCATGAATGCCCCACTTATCT TTCCGAGTCTCTTGCTCAAAAATTCTCTGAGGAACGTCAAACCATGTGGAAACAACTGATCGCCCAGTTTGAAAGCAAAC TGAAAGGCATGAAACTCTCTGCCAAACAACACACAGCCATGGTCAAACTGCTGACTGATTCACTAAGCGGCATCAGTGAT GAGACCCAAGCCACCAAATTGAGTGAACAGTTTGAAGGCGTGGCCATGCAGCTTTCAGAATCCGGCAACCCTGCGGTGCC GGTGATCAATTTAACGGGCGGTTCGCTCAGTGAAGCGGACGTGCTGCGTATTCTTGGTGAGCAAGCCAGCAAAACCGCGC AAGAACAGGCGGAGAAACAGCAAAAGCTCACTGCGAAAGTGAAAATCTTCACGGAAGCGATCGACAAAGCGGAAGGGCTC AGTGATGAAGTGAAGAAAGAGCTGAAAGAAGCGTCTGCGCTTATTAGCGTTGATATGTCGGATGAGCAGATCACCAAACT GGCAGAAAACCAAATTAAGCATGGCAACGAGAAAATGGTCTCCATTCAGTTGAATGGCTTAGGCTTTGGCAGTGTCACTG GCTCTCTCACTCAAACACCCGACCAGCAGCGTGAAAGTTTGCAGCTGCAAGCGCAAATTCACTCGGCGCTTCGCAACACC AATACCTATGCACTTGGTCAGTTGCGTTTAACGGAAGAGAAAGAACTGCCCGTGTTTGCTCGCCAAGTGCTGGCCGAGTT CGACCGCTTACATCATCACAAGATTCATGCTGAACGCTTGGCGTTAACAGGCCAAGGCAGCGCCAACATCGTGTCAGACA GCGAACTGCCTGTTTCTGTGCAGCGTGAAGTGATTCGCGAAGCGCTTTCTGACCTTAATGTGTTGCAACTGGTACAAACG CTGACCGACTTCAGCGCATCAGCGACAACCAATATCCCTTATGAAAACCGCGATGTGTCGGCGATCATGGGCGATGGCAT TGTGTTTGAGCACGGTACCATTCCGAAAGTGAAGAACTCGCAGCGCATGGATTTGGCGTATGTCTTGCCAATGAAAGTGG CGTTTGAAGTCTCGAACGAGTTAATGCATTTTTCCAAGTCGTCTGCCATTAACTGGGATGCTTGGGGGCGCAACGTCGCG ACAGCGAGCCGCATCATCAAAGAACTGGTCGCTCGCCGCATTGTGAACACCATGCAGCGCGTAGCGGACTCATACCTTGC GGCGCCTATCCAAGGTGAAGACATTGCCAACCAACTGCAAGACAAAGCGGAGTTTAAAACCGCTCAGTTCCCGATTGTGG CGCCGCATCAGCAGTATGATCTGCAAGGAAACACTGTGGGTAACGCTGAAAACCCAATCACACTACAAATTGATGGCACG ACCATTCAGCCTTATGACGGCTCAGGCACTCAAGCCCCAGGCACATACTACATCGTGACTTCTTACAACCTAGGTAAGTT TGTCCTGGTTGATGAATCGGGCGATCTGAAACCAGTCACCGCGAATGCAGCGAGCGTTGGCTACAGTTTTGCAACCAACA TCGTCAAAGTAGATAGCGATATTCCAGATGGTATGGCGCCAGAGAAGCACTACAACAAGCTGCTTCAAGCCATTGGTCGC CGTAAAGCCATCATGAAAGATGATCGCTTTGTTACGCCAGATTTCTTGCTGATGTCGAACACCCTCAATGACACCTGTAC CAATGCGGAGCAGTTTGTCGCCTCGATGAAGCGCAACGGCTCTGATACCACCGCACAAGGTGACTTAGAGATGGTGAAAG CACTGCCTTCGTTTTCAACCAATGCGCCAGCCACGCACTTGGGGGATGAGCGGATCATCATGGGTCAGAAAGGTGCGCTC ACTTACACGGTCGTTAAGCCATTCACGCTCAGTGAAATGCAAGAAGCGCGTGATGCTAATGGTCAGCTCAAAGGTGGTAA AGAAGCTTACGGTGAAGAGTACAACGCGATTCACTGTCCGAAGCCAATTCGTAACCGCTTTACCAGCGTACTCTTCTATT CACAGTCAGGCCGCTAA
Upstream 100 bases:
>100_bases TCTAACCCTCCCAACGGTTACTTTCATCACTCAAACTGCCCTTAATTGGCGACCGAGCCCCTGACATTTTCAGGGGCTTT TTTCGTTTTAAGGACAGGAA
Downstream 100 bases:
>100_bases TACGAGCCATTGCCCCGTTACTGCTTGTAAGGCAACGGGGCTTTTTTCTTACTCAAAGGTTTAGGTGACCCATCATGTCT ATCACTACTGCATTTACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 858; Mature: 858
Protein sequence:
>858_residues MNQRQLLKASGVLVLGATTTQGVIHLLSDAVKVDTGAAKRSVVTITRTGRFNDPRYGEFELTQSMFDSMIKNFNDGVYGQ EIFIDIAHKPEDGAGAVVKRLFTDRGRLRAEVEWFELGINKVTKEGFKYLSAEIHLNYVSNEAGTNGQYSEFGPTLLGAG LVTRPCIKNLDQIELSEACLHECPTYLSESLAQKFSEERQTMWKQLIAQFESKLKGMKLSAKQHTAMVKLLTDSLSGISD ETQATKLSEQFEGVAMQLSESGNPAVPVINLTGGSLSEADVLRILGEQASKTAQEQAEKQQKLTAKVKIFTEAIDKAEGL SDEVKKELKEASALISVDMSDEQITKLAENQIKHGNEKMVSIQLNGLGFGSVTGSLTQTPDQQRESLQLQAQIHSALRNT NTYALGQLRLTEEKELPVFARQVLAEFDRLHHHKIHAERLALTGQGSANIVSDSELPVSVQREVIREALSDLNVLQLVQT LTDFSASATTNIPYENRDVSAIMGDGIVFEHGTIPKVKNSQRMDLAYVLPMKVAFEVSNELMHFSKSSAINWDAWGRNVA TASRIIKELVARRIVNTMQRVADSYLAAPIQGEDIANQLQDKAEFKTAQFPIVAPHQQYDLQGNTVGNAENPITLQIDGT TIQPYDGSGTQAPGTYYIVTSYNLGKFVLVDESGDLKPVTANAASVGYSFATNIVKVDSDIPDGMAPEKHYNKLLQAIGR RKAIMKDDRFVTPDFLLMSNTLNDTCTNAEQFVASMKRNGSDTTAQGDLEMVKALPSFSTNAPATHLGDERIIMGQKGAL TYTVVKPFTLSEMQEARDANGQLKGGKEAYGEEYNAIHCPKPIRNRFTSVLFYSQSGR
Sequences:
>Translated_858_residues MNQRQLLKASGVLVLGATTTQGVIHLLSDAVKVDTGAAKRSVVTITRTGRFNDPRYGEFELTQSMFDSMIKNFNDGVYGQ EIFIDIAHKPEDGAGAVVKRLFTDRGRLRAEVEWFELGINKVTKEGFKYLSAEIHLNYVSNEAGTNGQYSEFGPTLLGAG LVTRPCIKNLDQIELSEACLHECPTYLSESLAQKFSEERQTMWKQLIAQFESKLKGMKLSAKQHTAMVKLLTDSLSGISD ETQATKLSEQFEGVAMQLSESGNPAVPVINLTGGSLSEADVLRILGEQASKTAQEQAEKQQKLTAKVKIFTEAIDKAEGL SDEVKKELKEASALISVDMSDEQITKLAENQIKHGNEKMVSIQLNGLGFGSVTGSLTQTPDQQRESLQLQAQIHSALRNT NTYALGQLRLTEEKELPVFARQVLAEFDRLHHHKIHAERLALTGQGSANIVSDSELPVSVQREVIREALSDLNVLQLVQT LTDFSASATTNIPYENRDVSAIMGDGIVFEHGTIPKVKNSQRMDLAYVLPMKVAFEVSNELMHFSKSSAINWDAWGRNVA TASRIIKELVARRIVNTMQRVADSYLAAPIQGEDIANQLQDKAEFKTAQFPIVAPHQQYDLQGNTVGNAENPITLQIDGT TIQPYDGSGTQAPGTYYIVTSYNLGKFVLVDESGDLKPVTANAASVGYSFATNIVKVDSDIPDGMAPEKHYNKLLQAIGR RKAIMKDDRFVTPDFLLMSNTLNDTCTNAEQFVASMKRNGSDTTAQGDLEMVKALPSFSTNAPATHLGDERIIMGQKGAL TYTVVKPFTLSEMQEARDANGQLKGGKEAYGEEYNAIHCPKPIRNRFTSVLFYSQSGR >Mature_858_residues MNQRQLLKASGVLVLGATTTQGVIHLLSDAVKVDTGAAKRSVVTITRTGRFNDPRYGEFELTQSMFDSMIKNFNDGVYGQ EIFIDIAHKPEDGAGAVVKRLFTDRGRLRAEVEWFELGINKVTKEGFKYLSAEIHLNYVSNEAGTNGQYSEFGPTLLGAG LVTRPCIKNLDQIELSEACLHECPTYLSESLAQKFSEERQTMWKQLIAQFESKLKGMKLSAKQHTAMVKLLTDSLSGISD ETQATKLSEQFEGVAMQLSESGNPAVPVINLTGGSLSEADVLRILGEQASKTAQEQAEKQQKLTAKVKIFTEAIDKAEGL SDEVKKELKEASALISVDMSDEQITKLAENQIKHGNEKMVSIQLNGLGFGSVTGSLTQTPDQQRESLQLQAQIHSALRNT NTYALGQLRLTEEKELPVFARQVLAEFDRLHHHKIHAERLALTGQGSANIVSDSELPVSVQREVIREALSDLNVLQLVQT LTDFSASATTNIPYENRDVSAIMGDGIVFEHGTIPKVKNSQRMDLAYVLPMKVAFEVSNELMHFSKSSAINWDAWGRNVA TASRIIKELVARRIVNTMQRVADSYLAAPIQGEDIANQLQDKAEFKTAQFPIVAPHQQYDLQGNTVGNAENPITLQIDGT TIQPYDGSGTQAPGTYYIVTSYNLGKFVLVDESGDLKPVTANAASVGYSFATNIVKVDSDIPDGMAPEKHYNKLLQAIGR RKAIMKDDRFVTPDFLLMSNTLNDTCTNAEQFVASMKRNGSDTTAQGDLEMVKALPSFSTNAPATHLGDERIIMGQKGAL TYTVVKPFTLSEMQEARDANGQLKGGKEAYGEEYNAIHCPKPIRNRFTSVLFYSQSGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94340; Mature: 94340
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQRQLLKASGVLVLGATTTQGVIHLLSDAVKVDTGAAKRSVVTITRTGRFNDPRYGEFE CCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHH LTQSMFDSMIKNFNDGVYGQEIFIDIAHKPEDGAGAVVKRLFTDRGRLRAEVEWFELGIN HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHH KVTKEGFKYLSAEIHLNYVSNEAGTNGQYSEFGPTLLGAGLVTRPCIKNLDQIELSEACL HHHHHHHHHEEEEEEEEEECCCCCCCCCCHHCCCHHHHCCHHHHHHHCCCHHHHHHHHHH HECPTYLSESLAQKFSEERQTMWKQLIAQFESKLKGMKLSAKQHTAMVKLLTDSLSGISD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC ETQATKLSEQFEGVAMQLSESGNPAVPVINLTGGSLSEADVLRILGEQASKTAQEQAEKQ HHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QKLTAKVKIFTEAIDKAEGLSDEVKKELKEASALISVDMSDEQITKLAENQIKHGNEKMV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCEEE SIQLNGLGFGSVTGSLTQTPDQQRESLQLQAQIHSALRNTNTYALGQLRLTEEKELPVFA EEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHH RQVLAEFDRLHHHKIHAERLALTGQGSANIVSDSELPVSVQREVIREALSDLNVLQLVQT HHHHHHHHHHHHHHHHHHHEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCHHHHHHHH LTDFSASATTNIPYENRDVSAIMGDGIVFEHGTIPKVKNSQRMDLAYVLPMKVAFEVSNE HHHCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHH LMHFSKSSAINWDAWGRNVATASRIIKELVARRIVNTMQRVADSYLAAPIQGEDIANQLQ HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH DKAEFKTAQFPIVAPHQQYDLQGNTVGNAENPITLQIDGTTIQPYDGSGTQAPGTYYIVT HHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCEEEEEE SYNLGKFVLVDESGDLKPVTANAASVGYSFATNIVKVDSDIPDGMAPEKHYNKLLQAIGR ECCCCEEEEEECCCCCCEEECCHHHHCHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHH RKAIMKDDRFVTPDFLLMSNTLNDTCTNAEQFVASMKRNGSDTTAQGDLEMVKALPSFST HHHHHCCCCCCCCCHHEEECCCCHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC NAPATHLGDERIIMGQKGALTYTVVKPFTLSEMQEARDANGQLKGGKEAYGEEYNAIHCP CCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHCCCCCEEECC KPIRNRFTSVLFYSQSGR HHHHHHHHEEEEEECCCC >Mature Secondary Structure MNQRQLLKASGVLVLGATTTQGVIHLLSDAVKVDTGAAKRSVVTITRTGRFNDPRYGEFE CCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCHHH LTQSMFDSMIKNFNDGVYGQEIFIDIAHKPEDGAGAVVKRLFTDRGRLRAEVEWFELGIN HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEHHHHHHHHH KVTKEGFKYLSAEIHLNYVSNEAGTNGQYSEFGPTLLGAGLVTRPCIKNLDQIELSEACL HHHHHHHHHEEEEEEEEEECCCCCCCCCCHHCCCHHHHCCHHHHHHHCCCHHHHHHHHHH HECPTYLSESLAQKFSEERQTMWKQLIAQFESKLKGMKLSAKQHTAMVKLLTDSLSGISD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC ETQATKLSEQFEGVAMQLSESGNPAVPVINLTGGSLSEADVLRILGEQASKTAQEQAEKQ HHHHHHHHHHHCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH QKLTAKVKIFTEAIDKAEGLSDEVKKELKEASALISVDMSDEQITKLAENQIKHGNEKMV HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCEEE SIQLNGLGFGSVTGSLTQTPDQQRESLQLQAQIHSALRNTNTYALGQLRLTEEKELPVFA EEEECCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHH RQVLAEFDRLHHHKIHAERLALTGQGSANIVSDSELPVSVQREVIREALSDLNVLQLVQT HHHHHHHHHHHHHHHHHHHEEEECCCCCCEECCCCCCHHHHHHHHHHHHHCCHHHHHHHH LTDFSASATTNIPYENRDVSAIMGDGIVFEHGTIPKVKNSQRMDLAYVLPMKVAFEVSNE HHHCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHH LMHFSKSSAINWDAWGRNVATASRIIKELVARRIVNTMQRVADSYLAAPIQGEDIANQLQ HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH DKAEFKTAQFPIVAPHQQYDLQGNTVGNAENPITLQIDGTTIQPYDGSGTQAPGTYYIVT HHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCEEEEECCCEECCCCCCCCCCCCEEEEEE SYNLGKFVLVDESGDLKPVTANAASVGYSFATNIVKVDSDIPDGMAPEKHYNKLLQAIGR ECCCCEEEEEECCCCCCEEECCHHHHCHHHHCCEEEECCCCCCCCCCHHHHHHHHHHHHH RKAIMKDDRFVTPDFLLMSNTLNDTCTNAEQFVASMKRNGSDTTAQGDLEMVKALPSFST HHHHHCCCCCCCCCHHEEECCCCHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC NAPATHLGDERIIMGQKGALTYTVVKPFTLSEMQEARDANGQLKGGKEAYGEEYNAIHCP CCCCCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHHCCCCCCCCCHHHHCCCCCEEECC KPIRNRFTSVLFYSQSGR HHHHHHHHEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA