| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
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The map label for this gene is 27363565
Identifier: 27363565
GI number: 27363565
Start: 78085
End: 78273
Strand: Reverse
Name: 27363565
Synonym: VV1_0080
Alternate gene names: NA
Gene position: 78273-78085 (Counterclockwise)
Preceding gene: 27363568
Following gene: 27363564
Centisome position: 2.39
GC content: 44.97
Gene sequence:
>189_bases GTGGCTAATTTAAAAAATCCAAATGCGGATCTGGTTGCTACGCGTGATTTAGATTTAAGACGCAGAGTCGAGCGTTTAGC AACGTTAGATGAACGTAAACCGGCACAAATGACCCGGATTCTTCTGAAAAAAGCAGTAGCGGAGAAAGAGGAGGAGTTGG GATTGCCACCATTAAAGGAGGCGATGTGA
Upstream 100 bases:
>100_bases CGGATCTAGTATCTACATCGAACGTTAACAAAGTTAAATATCTGGAACTTTTGTTTTCAGTTAGCTTCAAAAATTGAGCT TAACATATTAGGAGTAACAA
Downstream 100 bases:
>100_bases ACAGGTATTAAAAAACCCTTACCAACGGCAATCGGTAAGGGCCGTAGAAGTCTGAATTTCACAGTCAACCACTAGGATAA CGAGCGAGGCGGCAACCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MANLKNPNADLVATRDLDLRRRVERLATLDERKPAQMTRILLKKAVAEKEEELGLPPLKEAM
Sequences:
>Translated_62_residues MANLKNPNADLVATRDLDLRRRVERLATLDERKPAQMTRILLKKAVAEKEEELGLPPLKEAM >Mature_61_residues ANLKNPNADLVATRDLDLRRRVERLATLDERKPAQMTRILLKKAVAEKEEELGLPPLKEAM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7081; Mature: 6950
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLKNPNADLVATRDLDLRRRVERLATLDERKPAQMTRILLKKAVAEKEEELGLPPLKE CCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH AM CC >Mature Secondary Structure ANLKNPNADLVATRDLDLRRRVERLATLDERKPAQMTRILLKKAVAEKEEELGLPPLKE CCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH AM CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA