| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
Click here to switch to the map view.
The map label for this gene is 27363560
Identifier: 27363560
GI number: 27363560
Start: 75863
End: 76162
Strand: Reverse
Name: 27363560
Synonym: VV1_0075
Alternate gene names: NA
Gene position: 76162-75863 (Counterclockwise)
Preceding gene: 27363561
Following gene: 27363559
Centisome position: 2.32
GC content: 52.0
Gene sequence:
>300_bases ATGCCTAACCCTGTTTTGGCCACCAAGCTTTCTGCACCGGAGCGTGCCTGCTTGTTCCGCTTGGAGCAACAAATGGTGCG CCAGCAGGGCTTTATCAACCGTCATGCGTTTATTGATGAGCAAGATGCTGTGTTCAACCAGTGGCTTGAGGCTGGACACA TCAAACTCGACAGCAAAGAGCTGGACAATCTCCCCAAAGAGCAGGTTGAACAGCAGCAGCTGACGCACAGTTGCCATTTG AGCGTTGAGCTTTGGTTGGCATCTGCTTGTTTAAGGCGGTTGTATGCCTGCGACCTGTAA
Upstream 100 bases:
>100_bases GTGGCAGGGTTGCTAGCTGTGCTGAATGAGAACTCGGTTTGGGCGCGCCATCAGCTGCTTCCCTCAGAGCGTTTAGCCAA AGCCTACGAGGAAGATCTTT
Downstream 100 bases:
>100_bases GCCCTATAAGGGTTGGCAATGTCCGCTTTGGTTTTCCGAGCCTGTTTTAACCCGTACGGCAATGCCGACCGTTATTTTAA GCGAGCTGCCAGCAGACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MPNPVLATKLSAPERACLFRLEQQMVRQQGFINRHAFIDEQDAVFNQWLEAGHIKLDSKELDNLPKEQVEQQQLTHSCHL SVELWLASACLRRLYACDL
Sequences:
>Translated_99_residues MPNPVLATKLSAPERACLFRLEQQMVRQQGFINRHAFIDEQDAVFNQWLEAGHIKLDSKELDNLPKEQVEQQQLTHSCHL SVELWLASACLRRLYACDL >Mature_98_residues PNPVLATKLSAPERACLFRLEQQMVRQQGFINRHAFIDEQDAVFNQWLEAGHIKLDSKELDNLPKEQVEQQQLTHSCHLS VELWLASACLRRLYACDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11474; Mature: 11343
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNPVLATKLSAPERACLFRLEQQMVRQQGFINRHAFIDEQDAVFNQWLEAGHIKLDSKE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCEECHHH LDNLPKEQVEQQQLTHSCHLSVELWLASACLRRLYACDL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PNPVLATKLSAPERACLFRLEQQMVRQQGFINRHAFIDEQDAVFNQWLEAGHIKLDSKE CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCEECHHH LDNLPKEQVEQQQLTHSCHLSVELWLASACLRRLYACDL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA