| Definition | Vibrio vulnificus CMCP6 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_004459 |
| Length | 3,281,866 |
Click here to switch to the map view.
The map label for this gene is 27363558
Identifier: 27363558
GI number: 27363558
Start: 72849
End: 75608
Strand: Reverse
Name: 27363558
Synonym: VV1_0072
Alternate gene names: NA
Gene position: 75608-72849 (Counterclockwise)
Preceding gene: 27363559
Following gene: 326423655
Centisome position: 2.3
GC content: 52.03
Gene sequence:
>2760_bases ATGGCGTCCGCAGAACAACTAAAACAGATCATTAATTTACACGAGTTGGCTGACCGTTTAGGTATGGAAAGACCCGATCC ATCCGGCAATTACCGCGCACCCAACCGCCCTGACAAGCACCCAAGCGTGAGCATTTTCGAGGCAGGTAAAGCCGGATACA TGATGTGGAAAGATCATGCTTCCGGTGAAAAAGGCAGTTGTATCGACCTTGTGATTTATTGCGGTCAGGCGATGGATGCC AGTGAAGCGATGAAGTGGCTGCACGAAGAGTTCAATATTCCTACCGATGAGCTAGCCCCTCAGCAGCCTAAGCAGCAAAG CCAAATTGCGTGGGTTGCTGAGAAGCAGTTAGCGGTTGCGGGTGATGCAAGAGCCTATCTGATTGATGTGCGCGGCATTC CGGCCGATGTGGTGGATATGCTGCAAAAGCGCGGTGCATTTGGTTACAGCGATTGGACAAGCCCAAGCAAAAACCCTGGT GAGTTGGGTTACGGTGGCCCTGCCGTGACGTTCCCGAGCCGATGCCTATTTACCAATGAAGTGGTGGGGATAGATTTCCG ATTTTTTGATCCTGCGCTAAATGGTGATAACAAAACCAAGGCGATGGGGGAAAAACGCGGCTTCCCGTACATCCCTGACA AAATGGCGCTTAGGCGTGCCAAAACCGTGATTGTGGTTGAATCTGCGATTAATGCTATCTCGGCGATTGCTGCTTACGAT CCTAAGGGGAAAGGGAAAGTACCAGTGACGGCGATTGCGACTCGCGGTCTTGCGGTCGACGAAATCGACTGGCGATTCCT ATCTGGCAAGCGTGTGGTTTGTTGTTTTGACAATGACCAGCCTATTGCGGAAGGGCCAAGAAAAGGCCACAGACCAGGGC CAGAGGCCGCGTGGATCGTGCACGAGCGATGCACGGCGCTCAACATTCCTTGTTACCTTGTTGATCAATCCGGTGGCAAA TGGGACGAGATCAACGACCTTAACGATTATCTACGTAAACACGGTACGCAAATGACCAAGTATGCGCTGGATTACTTTGA GCCTTGGCTTATTGCAGGGCAAGAAGGGGAGTTTGAGAACTCCCAGTTTAAGCGCTTGCCGCTGCCACATCATGATCAAT CACTGTACTGGCTGTTTCGAGTGAAGCCCGACTTTACCAGTTATTTGAAAATCGTGACCAATGAAGAAGGTGAGCAGAAG ATCCCACAGGATGTGTGCTCGTTCCGCATTGCTGGCTTATCGAAAGTGACGATTTCATCGGCGAATTCAGCCATGACAGG CGAACCCGATTTGCAGCCGACGAAAGTATACTCAGCCACGATTCAAACGCCCGATTCACCGACGGAGCTAACCCGTTTTG TGCTCAAACGTGAGCAGCTTTACAACATCGATGTTTGGCGTCGGGTCGGCGGCGGGATTTTCAACCCGAGCAAGTTCACC CGAATGATCTCGATACTCGAGCGCGCCACCCACCTTGGCGAGCGCAACGCGGTCAATTTCGTTGGGCTTGCCTGGCACAA TGGCCAAGCGATTTTAAACGAAGGACCGGACTCGTTCTTTACTGACCCAACGCAGCAGTGCCCATACCACAATTTGCAGT TTCCATCTGGCTCTCCAGAGCAGGGATTGCGTGTGATTGAAGCGTATCACGCCACATTCAAAAACAACGCGGCTTTGATG CTGTTGGTTTGGGGCTTGGGTGCGCACATCAAAACTTACTTAGGCTTTTGGCCTCATTACATGCTGAATGCAGGGAAAGG CGCGGGTAAATCGACGCTGGTTAAGTCGCTCGAGCGCACGTTGGCATTCACCATGTTTTCTGGCCAGAGCTTGAAAACCG AGTTCCGTTTGCTGACATCGATATCGCACACCTCTCACCCGGTCGGTTGGGAAGAGCTCTCCGCTCAGGGTCAAGGCGTA ATTGATAAAGCGGTGGCCATGCTGCAAGAGAGCTACCAATACACCATCACTCGCCGTGGTACGGACATGACGGAGTTCTT GAGTATTGCGCCAGTGCTGTTGGCGGGTGAAGACGTGCCGGTGCAATCGTTGCTTGGCAAGCTGGTGCGTTCTGACTTGA CCGGACGCAAGGGCGACATGATTCCCGATGAGTTGCCTCGTTTCCCTGTTAAAAACTGGATCCTGTACCTGACCTCTTAC ACTCGGCCACAAATGAAACGCGCTTATCGCGAGTGTGTTGATTACCTTTCGAAGCGTTGTATGGCTAAGCCTGACGACAA CGGCGCGAACCGTATGCGTGATAACTATGCCTGTTTGATGCTGACGTGGCGTTTGCTGTGCGAATTCACGGGCGTTGCAA GTAACTATGGTCACTTTATTCAAGATTTGGTGACAGAGATGAATGCGCACATTCGCGAAACAGAAGCAGAGCGCGAGCCG TGGGTGTGGATTATGGAGCTTATCCTGGGCGAGATGGATGCTGGGCATTTCCGCCACCCGTTCTCTTTCGATTGGATTGA GGGCGAGCTGTGCTTGCTGGTTCGTACCAGCCACATCATGCAGCACATAAGCCAAAGCCCTGCATTGAAAGCCAAGTTTG ACAGCTTGCCTGTGAAGAGCGATCGCATTCTGAAGAAGCAGCTCAAGGAGGCCAAAGTGGTGCTGAAAGATGGCCACGAG AAATCGATTAACGGCAAACGCGTTGCCAATTTTGTCGCCCTGGGCGTTGAGAACCTGCGCGAGTTCGGCCTGTTCCCAAC CATTCCAGACGATGTTCGTGAGAAAGAAACTAACCAGTAA
Upstream 100 bases:
>100_bases CTGAAATCTCAAGAGTTTCAGCAGGTAAAACAGAACTTAGAACGTCTTTTTGGCCCCGTCTCGATTGGGGTGGAACTACA CAGAATTGGAGGCACGCTGT
Downstream 100 bases:
>100_bases GGATATGACTAATGAAAAACCTAATGATTGACTTAGAGACAATGGGGAATAGCAGCAATGCAGCGATCGTCGCTATTGGT GCTTGTTTTTTCGAGCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 919; Mature: 918
Protein sequence:
>919_residues MASAEQLKQIINLHELADRLGMERPDPSGNYRAPNRPDKHPSVSIFEAGKAGYMMWKDHASGEKGSCIDLVIYCGQAMDA SEAMKWLHEEFNIPTDELAPQQPKQQSQIAWVAEKQLAVAGDARAYLIDVRGIPADVVDMLQKRGAFGYSDWTSPSKNPG ELGYGGPAVTFPSRCLFTNEVVGIDFRFFDPALNGDNKTKAMGEKRGFPYIPDKMALRRAKTVIVVESAINAISAIAAYD PKGKGKVPVTAIATRGLAVDEIDWRFLSGKRVVCCFDNDQPIAEGPRKGHRPGPEAAWIVHERCTALNIPCYLVDQSGGK WDEINDLNDYLRKHGTQMTKYALDYFEPWLIAGQEGEFENSQFKRLPLPHHDQSLYWLFRVKPDFTSYLKIVTNEEGEQK IPQDVCSFRIAGLSKVTISSANSAMTGEPDLQPTKVYSATIQTPDSPTELTRFVLKREQLYNIDVWRRVGGGIFNPSKFT RMISILERATHLGERNAVNFVGLAWHNGQAILNEGPDSFFTDPTQQCPYHNLQFPSGSPEQGLRVIEAYHATFKNNAALM LLVWGLGAHIKTYLGFWPHYMLNAGKGAGKSTLVKSLERTLAFTMFSGQSLKTEFRLLTSISHTSHPVGWEELSAQGQGV IDKAVAMLQESYQYTITRRGTDMTEFLSIAPVLLAGEDVPVQSLLGKLVRSDLTGRKGDMIPDELPRFPVKNWILYLTSY TRPQMKRAYRECVDYLSKRCMAKPDDNGANRMRDNYACLMLTWRLLCEFTGVASNYGHFIQDLVTEMNAHIRETEAEREP WVWIMELILGEMDAGHFRHPFSFDWIEGELCLLVRTSHIMQHISQSPALKAKFDSLPVKSDRILKKQLKEAKVVLKDGHE KSINGKRVANFVALGVENLREFGLFPTIPDDVREKETNQ
Sequences:
>Translated_919_residues MASAEQLKQIINLHELADRLGMERPDPSGNYRAPNRPDKHPSVSIFEAGKAGYMMWKDHASGEKGSCIDLVIYCGQAMDA SEAMKWLHEEFNIPTDELAPQQPKQQSQIAWVAEKQLAVAGDARAYLIDVRGIPADVVDMLQKRGAFGYSDWTSPSKNPG ELGYGGPAVTFPSRCLFTNEVVGIDFRFFDPALNGDNKTKAMGEKRGFPYIPDKMALRRAKTVIVVESAINAISAIAAYD PKGKGKVPVTAIATRGLAVDEIDWRFLSGKRVVCCFDNDQPIAEGPRKGHRPGPEAAWIVHERCTALNIPCYLVDQSGGK WDEINDLNDYLRKHGTQMTKYALDYFEPWLIAGQEGEFENSQFKRLPLPHHDQSLYWLFRVKPDFTSYLKIVTNEEGEQK IPQDVCSFRIAGLSKVTISSANSAMTGEPDLQPTKVYSATIQTPDSPTELTRFVLKREQLYNIDVWRRVGGGIFNPSKFT RMISILERATHLGERNAVNFVGLAWHNGQAILNEGPDSFFTDPTQQCPYHNLQFPSGSPEQGLRVIEAYHATFKNNAALM LLVWGLGAHIKTYLGFWPHYMLNAGKGAGKSTLVKSLERTLAFTMFSGQSLKTEFRLLTSISHTSHPVGWEELSAQGQGV IDKAVAMLQESYQYTITRRGTDMTEFLSIAPVLLAGEDVPVQSLLGKLVRSDLTGRKGDMIPDELPRFPVKNWILYLTSY TRPQMKRAYRECVDYLSKRCMAKPDDNGANRMRDNYACLMLTWRLLCEFTGVASNYGHFIQDLVTEMNAHIRETEAEREP WVWIMELILGEMDAGHFRHPFSFDWIEGELCLLVRTSHIMQHISQSPALKAKFDSLPVKSDRILKKQLKEAKVVLKDGHE KSINGKRVANFVALGVENLREFGLFPTIPDDVREKETNQ >Mature_918_residues ASAEQLKQIINLHELADRLGMERPDPSGNYRAPNRPDKHPSVSIFEAGKAGYMMWKDHASGEKGSCIDLVIYCGQAMDAS EAMKWLHEEFNIPTDELAPQQPKQQSQIAWVAEKQLAVAGDARAYLIDVRGIPADVVDMLQKRGAFGYSDWTSPSKNPGE LGYGGPAVTFPSRCLFTNEVVGIDFRFFDPALNGDNKTKAMGEKRGFPYIPDKMALRRAKTVIVVESAINAISAIAAYDP KGKGKVPVTAIATRGLAVDEIDWRFLSGKRVVCCFDNDQPIAEGPRKGHRPGPEAAWIVHERCTALNIPCYLVDQSGGKW DEINDLNDYLRKHGTQMTKYALDYFEPWLIAGQEGEFENSQFKRLPLPHHDQSLYWLFRVKPDFTSYLKIVTNEEGEQKI PQDVCSFRIAGLSKVTISSANSAMTGEPDLQPTKVYSATIQTPDSPTELTRFVLKREQLYNIDVWRRVGGGIFNPSKFTR MISILERATHLGERNAVNFVGLAWHNGQAILNEGPDSFFTDPTQQCPYHNLQFPSGSPEQGLRVIEAYHATFKNNAALML LVWGLGAHIKTYLGFWPHYMLNAGKGAGKSTLVKSLERTLAFTMFSGQSLKTEFRLLTSISHTSHPVGWEELSAQGQGVI DKAVAMLQESYQYTITRRGTDMTEFLSIAPVLLAGEDVPVQSLLGKLVRSDLTGRKGDMIPDELPRFPVKNWILYLTSYT RPQMKRAYRECVDYLSKRCMAKPDDNGANRMRDNYACLMLTWRLLCEFTGVASNYGHFIQDLVTEMNAHIRETEAEREPW VWIMELILGEMDAGHFRHPFSFDWIEGELCLLVRTSHIMQHISQSPALKAKFDSLPVKSDRILKKQLKEAKVVLKDGHEK SINGKRVANFVALGVENLREFGLFPTIPDDVREKETNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103398; Mature: 103267
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASAEQLKQIINLHELADRLGMERPDPSGNYRAPNRPDKHPSVSIFEAGKAGYMMWKDHA CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCC SGEKGSCIDLVIYCGQAMDASEAMKWLHEEFNIPTDELAPQQPKQQSQIAWVAEKQLAVA CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHEEEE GDARAYLIDVRGIPADVVDMLQKRGAFGYSDWTSPSKNPGELGYGGPAVTFPSRCLFTNE CCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC VVGIDFRFFDPALNGDNKTKAMGEKRGFPYIPDKMALRRAKTVIVVESAINAISAIAAYD EEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHCEEEEEHHHHHHHHHHHHCC PKGKGKVPVTAIATRGLAVDEIDWRFLSGKRVVCCFDNDQPIAEGPRKGHRPGPEAAWIV CCCCCCCCEEEHHHCCCEECCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEE HERCTALNIPCYLVDQSGGKWDEINDLNDYLRKHGTQMTKYALDYFEPWLIAGQEGEFEN ECCCCEECCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCC SQFKRLPLPHHDQSLYWLFRVKPDFTSYLKIVTNEEGEQKIPQDVCSFRIAGLSKVTISS CCCCCCCCCCCCCCEEEEEEECCCHHHHHEEEECCCCCCCCHHHHHHHHHCCCEEEEEEC ANSAMTGEPDLQPTKVYSATIQTPDSPTELTRFVLKREQLYNIDVWRRVGGGIFNPSKFT CCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHH RMISILERATHLGERNAVNFVGLAWHNGQAILNEGPDSFFTDPTQQCPYHNLQFPSGSPE HHHHHHHHHHHCCCCCCCEEEEEEEECCCEEECCCCCCCCCCCHHHCCCCCCCCCCCCHH QGLRVIEAYHATFKNNAALMLLVWGLGAHIKTYLGFWPHYMLNAGKGAGKSTLVKSLERT HHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LAFTMFSGQSLKTEFRLLTSISHTSHPVGWEELSAQGQGVIDKAVAMLQESYQYTITRRG HHHHEECCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCEEEEEECC TDMTEFLSIAPVLLAGEDVPVQSLLGKLVRSDLTGRKGDMIPDELPRFPVKNWILYLTSY CCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHEEEECCC TRPQMKRAYRECVDYLSKRCMAKPDDNGANRMRDNYACLMLTWRLLCEFTGVASNYGHFI CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHH QDLVTEMNAHIRETEAEREPWVWIMELILGEMDAGHFRHPFSFDWIEGELCLLVRTSHIM HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEHHHHHH QHISQSPALKAKFDSLPVKSDRILKKQLKEAKVVLKDGHEKSINGKRVANFVALGVENLR HHHHCCCCCEEHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH EFGLFPTIPDDVREKETNQ HCCCCCCCCHHHHHCCCCC >Mature Secondary Structure ASAEQLKQIINLHELADRLGMERPDPSGNYRAPNRPDKHPSVSIFEAGKAGYMMWKDHA CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCC SGEKGSCIDLVIYCGQAMDASEAMKWLHEEFNIPTDELAPQQPKQQSQIAWVAEKQLAVA CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHEEEE GDARAYLIDVRGIPADVVDMLQKRGAFGYSDWTSPSKNPGELGYGGPAVTFPSRCLFTNE CCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC VVGIDFRFFDPALNGDNKTKAMGEKRGFPYIPDKMALRRAKTVIVVESAINAISAIAAYD EEEEEEEEECCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHCEEEEEHHHHHHHHHHHHCC PKGKGKVPVTAIATRGLAVDEIDWRFLSGKRVVCCFDNDQPIAEGPRKGHRPGPEAAWIV CCCCCCCCEEEHHHCCCEECCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEE HERCTALNIPCYLVDQSGGKWDEINDLNDYLRKHGTQMTKYALDYFEPWLIAGQEGEFEN ECCCCEECCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEECCCCCCCC SQFKRLPLPHHDQSLYWLFRVKPDFTSYLKIVTNEEGEQKIPQDVCSFRIAGLSKVTISS CCCCCCCCCCCCCCEEEEEEECCCHHHHHEEEECCCCCCCCHHHHHHHHHCCCEEEEEEC ANSAMTGEPDLQPTKVYSATIQTPDSPTELTRFVLKREQLYNIDVWRRVGGGIFNPSKFT CCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHH RMISILERATHLGERNAVNFVGLAWHNGQAILNEGPDSFFTDPTQQCPYHNLQFPSGSPE HHHHHHHHHHHCCCCCCCEEEEEEEECCCEEECCCCCCCCCCCHHHCCCCCCCCCCCCHH QGLRVIEAYHATFKNNAALMLLVWGLGAHIKTYLGFWPHYMLNAGKGAGKSTLVKSLERT HHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LAFTMFSGQSLKTEFRLLTSISHTSHPVGWEELSAQGQGVIDKAVAMLQESYQYTITRRG HHHHEECCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCEEEEEECC TDMTEFLSIAPVLLAGEDVPVQSLLGKLVRSDLTGRKGDMIPDELPRFPVKNWILYLTSY CCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHCCCCCHHHHEEEECCC TRPQMKRAYRECVDYLSKRCMAKPDDNGANRMRDNYACLMLTWRLLCEFTGVASNYGHFI CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHH QDLVTEMNAHIRETEAEREPWVWIMELILGEMDAGHFRHPFSFDWIEGELCLLVRTSHIM HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEHHHHHH QHISQSPALKAKFDSLPVKSDRILKKQLKEAKVVLKDGHEKSINGKRVANFVALGVENLR HHHHCCCCCEEHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH EFGLFPTIPDDVREKETNQ HCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA