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The map label for this gene is intE [C]

Identifier: 27363549

GI number: 27363549

Start: 68551

End: 69225

Strand: Reverse

Name: intE [C]

Synonym: VV1_0063

Alternate gene names: 27363549

Gene position: 69225-68551 (Counterclockwise)

Preceding gene: 27363550

Following gene: 326423651

Centisome position: 2.11

GC content: 49.78

Gene sequence:

>675_bases
TTGGTCGACAATCCGGCCAAACGCAAAAACGTAAGGCCGAAGGAGGAGAAGCAACGCCGCGACTTAACGCTCTCTGAATA
TAAATCGATTTGGGCATCGCTCCTCAGTGGGATGAGGGTTGCAATGGACCTCTCTCTCGAGACAACGCACGCGGTTAATG
AGATATGTGCGATGAAATACGAGGATATCACCATGCTCGATGCTCCAGTTCTGGAAGATGGTGTTGAGGTGTTTGGGTAT
CTGCGCATTCATCGCCGTAAGGTAAAAAAGAAGGAAGCAAGCCGAGTTGTTATCCCTGTGACAAGGTCACTGCTGAATAT
TATTGAAGCGAGCAAGGACAATATTGATTCACCTTACGTGGTGCATCGTCTGCCGGAAAAACGCAGCAATGATGTGAGCC
AGTATTGTGATCACCTCACTCAGGTGAACCGAAAATATCTGAGCCGCTTTTTTTCCAAGTTACGGGACCAGGTGAAGGTC
AAAAAAGGTGTGCCTGCAGACTGTCGGCCAACGTATCACGAGATTCGAGGGCTGAGTATTCACTTGTACGATAAGGCTGG
CCACGACGCTCAAGCACGCGCTGCACACACGGATTCTCGCAGTACCAAGATATACAAAGAGGGCCATGAGAAGTGGGTTC
AGGTACCGGCTGTTGAGCTGGCGATTTGGGGGTAA

Upstream 100 bases:

>100_bases
GGTGCTCGATGCCGTTGCTGCAGGTAAATCAAATAATGTCTTCAACCGCTGGATAGCGTTTATGTCGAAGGTGTTTGATT
ACGCATCGATGAATCGGTGA

Downstream 100 bases:

>100_bases
TATTGGAACCAGTTTTGGAACCATTTTGGAACCGCCTTGTTTTGAGGCGGTTTTCTTAGGGTGTAAAAAAGCCCGTAACT
CATTGAATTACGGGCCTTAG

Product: Integrase

Products: NA

Alternate protein names: Prophage Lambda Integrase; Phage Integrase

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MVDNPAKRKNVRPKEEKQRRDLTLSEYKSIWASLLSGMRVAMDLSLETTHAVNEICAMKYEDITMLDAPVLEDGVEVFGY
LRIHRRKVKKKEASRVVIPVTRSLLNIIEASKDNIDSPYVVHRLPEKRSNDVSQYCDHLTQVNRKYLSRFFSKLRDQVKV
KKGVPADCRPTYHEIRGLSIHLYDKAGHDAQARAAHTDSRSTKIYKEGHEKWVQVPAVELAIWG

Sequences:

>Translated_224_residues
MVDNPAKRKNVRPKEEKQRRDLTLSEYKSIWASLLSGMRVAMDLSLETTHAVNEICAMKYEDITMLDAPVLEDGVEVFGY
LRIHRRKVKKKEASRVVIPVTRSLLNIIEASKDNIDSPYVVHRLPEKRSNDVSQYCDHLTQVNRKYLSRFFSKLRDQVKV
KKGVPADCRPTYHEIRGLSIHLYDKAGHDAQARAAHTDSRSTKIYKEGHEKWVQVPAVELAIWG
>Mature_224_residues
MVDNPAKRKNVRPKEEKQRRDLTLSEYKSIWASLLSGMRVAMDLSLETTHAVNEICAMKYEDITMLDAPVLEDGVEVFGY
LRIHRRKVKKKEASRVVIPVTRSLLNIIEASKDNIDSPYVVHRLPEKRSNDVSQYCDHLTQVNRKYLSRFFSKLRDQVKV
KKGVPADCRPTYHEIRGLSIHLYDKAGHDAQARAAHTDSRSTKIYKEGHEKWVQVPAVELAIWG

Specific function: Integrase From The Cryptic Lambdoic Prophage E14. Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25824; Mature: 25824

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDNPAKRKNVRPKEEKQRRDLTLSEYKSIWASLLSGMRVAMDLSLETTHAVNEICAMKY
CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHCC
EDITMLDAPVLEDGVEVFGYLRIHRRKVKKKEASRVVIPVTRSLLNIIEASKDNIDSPYV
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHCCCCCCCCHH
VHRLPEKRSNDVSQYCDHLTQVNRKYLSRFFSKLRDQVKVKKGVPADCRPTYHEIRGLSI
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEE
HLYDKAGHDAQARAAHTDSRSTKIYKEGHEKWVQVPAVELAIWG
EEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEECC
>Mature Secondary Structure
MVDNPAKRKNVRPKEEKQRRDLTLSEYKSIWASLLSGMRVAMDLSLETTHAVNEICAMKY
CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCHHHHHCCCCHHHHHHHHHHHHCC
EDITMLDAPVLEDGVEVFGYLRIHRRKVKKKEASRVVIPVTRSLLNIIEASKDNIDSPYV
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHCCCCCCCCHH
VHRLPEKRSNDVSQYCDHLTQVNRKYLSRFFSKLRDQVKVKKGVPADCRPTYHEIRGLSI
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEE
HLYDKAGHDAQARAAHTDSRSTKIYKEGHEKWVQVPAVELAIWG
EEECCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA