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The map label for this gene is 27363499

Identifier: 27363499

GI number: 27363499

Start: 10998

End: 11969

Strand: Reverse

Name: 27363499

Synonym: VV1_0009

Alternate gene names: NA

Gene position: 11969-10998 (Counterclockwise)

Preceding gene: 27363500

Following gene: 27363498

Centisome position: 0.36

GC content: 40.12

Gene sequence:

>972_bases
ATGGATGATTCAAAAGGCAGTTACAAGTTAGGGTTGTTTGTGGTCTCAGCGTTGATCTCGTTATTTATTGTCCTGTTTAT
CCTAGGTGGTCGGTCTTTATTTGAACCTAAGATAATTATTGAGACTTACTTTGATGAATCAGTATCTGGTCTTGATGTTG
GAGCTCCGGTGCGCTTTCGTGGGATCACTGCCGGGGAAGTAGTGGCAATAGAATTGTCAGATGCGCTCTATGAATCAGCA
GTACCAAGAGAAAATAGGAAGTCCTATGTGGTTGTTCGCAGTGAGATCAACGGTACGAAAAGTACAGCCGAAGAATGGAA
TAGAAATATTGAAATTTCCATAGAGCGCGGTCTTAGAGCGACAACACAATTAGCAGGTATCACCGGTCAACAGTATTTAT
CATTTGACTATACACAGGCAGATGTAGAATTAAATTTCGATTGGGATCCAGACTACCCCTATGTACCATCAACAAAAAAC
TCCACGGGAAAAATCGTTTCAGGCATACAGCGTTTAATTTCTCGTTTGGATGAGGCGGATATCAACACATTAGTATCTAA
TATCAATATTCTGCTTGAAACTTTAAACAAATCTATAGGTCTGGTGGATGTTGAAGCGCTGAATGCGCAGCTCCTAACGT
TGCTGATAAATACTAACCAGATGGTGAAGGGTGTTGATGGCGTAGTTTCAGACCCAGAAGTGAAGGTTATCATCTCTTCA
ATCGCACAAATTAGCCAAAGTCTCAATTCATCTCTCAGTGATGAAGGTGATATCAATACGTTAATTAAAGATTTAGACCG
TGCGGCTGTCAGGCTAGATGTGATCATGGCTGATAACCAGCCTGAAATTAATTATGTCATGAAAGACTTGAGAGCCACTG
TCGAAAATTTAAAAAGCTTTTCCGAGACTTTGAAGAATCAGCCATCCAGTATCATATTTAGCTCTGAGCCTCAGAAGTTA
AAAATAGATTAA

Upstream 100 bases:

>100_bases
TTACGTGACCAAAGTAGCGATACCCGAGTTCGCCAGTTTTTCAACCGGAAGCCCGATGTACAAAAATCAGATGAACAAAA
AGAAGAGAGTGAGCTAAGTA

Downstream 100 bases:

>100_bases
AACGTGAATATTACGACTCCAAATAAAGTGTGGTTAGATATGAATAGAAATAAATATTTCCTAGTGATGTTGAGTCTTTT
TGTTTTATTTGGCTGTGGGA

Product: putative ABC transport system periplasmic substrate-binding protein

Products: NA

Alternate protein names: ABC-Type Transport System Periplasmic Component; Mammalian Cell Entry Related Domain-Containing Protein; PqiB Family Protein; Paraquant-Inducible Protein B

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MDDSKGSYKLGLFVVSALISLFIVLFILGGRSLFEPKIIIETYFDESVSGLDVGAPVRFRGITAGEVVAIELSDALYESA
VPRENRKSYVVVRSEINGTKSTAEEWNRNIEISIERGLRATTQLAGITGQQYLSFDYTQADVELNFDWDPDYPYVPSTKN
STGKIVSGIQRLISRLDEADINTLVSNINILLETLNKSIGLVDVEALNAQLLTLLINTNQMVKGVDGVVSDPEVKVIISS
IAQISQSLNSSLSDEGDINTLIKDLDRAAVRLDVIMADNQPEINYVMKDLRATVENLKSFSETLKNQPSSIIFSSEPQKL
KID

Sequences:

>Translated_323_residues
MDDSKGSYKLGLFVVSALISLFIVLFILGGRSLFEPKIIIETYFDESVSGLDVGAPVRFRGITAGEVVAIELSDALYESA
VPRENRKSYVVVRSEINGTKSTAEEWNRNIEISIERGLRATTQLAGITGQQYLSFDYTQADVELNFDWDPDYPYVPSTKN
STGKIVSGIQRLISRLDEADINTLVSNINILLETLNKSIGLVDVEALNAQLLTLLINTNQMVKGVDGVVSDPEVKVIISS
IAQISQSLNSSLSDEGDINTLIKDLDRAAVRLDVIMADNQPEINYVMKDLRATVENLKSFSETLKNQPSSIIFSSEPQKL
KID
>Mature_323_residues
MDDSKGSYKLGLFVVSALISLFIVLFILGGRSLFEPKIIIETYFDESVSGLDVGAPVRFRGITAGEVVAIELSDALYESA
VPRENRKSYVVVRSEINGTKSTAEEWNRNIEISIERGLRATTQLAGITGQQYLSFDYTQADVELNFDWDPDYPYVPSTKN
STGKIVSGIQRLISRLDEADINTLVSNINILLETLNKSIGLVDVEALNAQLLTLLINTNQMVKGVDGVVSDPEVKVIISS
IAQISQSLNSSLSDEGDINTLIKDLDRAAVRLDVIMADNQPEINYVMKDLRATVENLKSFSETLKNQPSSIIFSSEPQKL
KID

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35601; Mature: 35601

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDSKGSYKLGLFVVSALISLFIVLFILGGRSLFEPKIIIETYFDESVSGLDVGAPVRFR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEE
GITAGEVVAIELSDALYESAVPRENRKSYVVVRSEINGTKSTAEEWNRNIEISIERGLRA
CCCCCCEEEEEEHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCCCEEEEECCCCCH
TTQLAGITGQQYLSFDYTQADVELNFDWDPDYPYVPSTKNSTGKIVSGIQRLISRLDEAD
HHHHHCCCCCHHEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHH
INTLVSNINILLETLNKSIGLVDVEALNAQLLTLLINTNQMVKGVDGVVSDPEVKVIISS
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHEEEEEEECCCHHHHCCCCCCCCCHHHHHHHH
IAQISQSLNSSLSDEGDINTLIKDLDRAAVRLDVIMADNQPEINYVMKDLRATVENLKSF
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
SETLKNQPSSIIFSSEPQKLKID
HHHHHCCCCEEEECCCCCEEECC
>Mature Secondary Structure
MDDSKGSYKLGLFVVSALISLFIVLFILGGRSLFEPKIIIETYFDESVSGLDVGAPVRFR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEE
GITAGEVVAIELSDALYESAVPRENRKSYVVVRSEINGTKSTAEEWNRNIEISIERGLRA
CCCCCCEEEEEEHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHCCCEEEEECCCCCH
TTQLAGITGQQYLSFDYTQADVELNFDWDPDYPYVPSTKNSTGKIVSGIQRLISRLDEAD
HHHHHCCCCCHHEEEEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHH
INTLVSNINILLETLNKSIGLVDVEALNAQLLTLLINTNQMVKGVDGVVSDPEVKVIISS
HHHHHHHHHHHHHHHHCCCCEEEHHHHHHEEEEEEECCCHHHHCCCCCCCCCHHHHHHHH
IAQISQSLNSSLSDEGDINTLIKDLDRAAVRLDVIMADNQPEINYVMKDLRATVENLKSF
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH
SETLKNQPSSIIFSSEPQKLKID
HHHHHCCCCEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA