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The map label for this gene is flaC [H]

Identifier: 161501853

GI number: 161501853

Start: 206753

End: 207910

Strand: Reverse

Name: flaC [H]

Synonym: VV1_0215

Alternate gene names: 161501853

Gene position: 207910-206753 (Counterclockwise)

Preceding gene: 27363698

Following gene: 27363696

Centisome position: 6.34

GC content: 46.03

Gene sequence:

>1158_bases
ATGGCTGTAACAGTAAGCACTAACGTATCCGCGATGACTGCGCAACGTTATCTAAACAAAGCGACAGATGAGTTAAACAC
CTCAATGGAACGTTTGTCATCTGGTCATAAAATTAATAGCGCCAAAGATGATGCGGCCGGTTTGCAAATTTCTAACCGCT
TAACCGCTCAGTCTCGTGGCCTAGATGTGGCGATGCGTAATGCCAACGATGGTATCTCTATCGCTCAAACCGCCGAAGGG
GCGATGAATGAAGCGACGGCAGTCTTGCAGCGCATGCGTGACTTGTCGATTCAATCCGCGAACGGTACTAACTCAACGTC
TGAGCGCCAAGCGATTCATGAAGAAGCGAGTGCTCTACAAGACGAAATTAACCGTATTGCTGAAACCACATCGTTTGGTG
GACGCCGTCTACTGAATGGCACCTTTGGTGATGCAGCATTCCAGATTGGTTCTAACTCTGGTGAAGCGATGATTATGGGC
TTAACCAGCATCCGTGCCGATGATTTCCGTATGGGTGGCACGACCTTCCAGTCTGAAAATGGCAAAAACAAAGATTGGGA
AGTGAGCGCGGATAACGCAGAGCTGAACATCGTATTGCCAGAGATGGGTGAAGATGAAGATGGCAATGTTATCGATTTAG
AAATCAACATCATGGCGAAAAGCGGTGATGATATTGAAGAATTGGCAACGTACATCAATGGTCAATCGGACTACATCAAC
GCATCGGTAAGTGAAGATGGCAAGCTGCAAATCTTTGTTGCTCAACCAAATGTGAAAGGCGATATCTCGATTTCGGGTAG
CCTTGCCTCTGAACTGGGTTTGAGTGACGAACCGATTGCGACAACAGTACAAGATTTGGATCTGCGTACCGTACAAGGTT
CTCAGAACGCAATTAGCGTTATTGACGCGGCATTGAAGTACGTTGATTCACAACGTGCGGACTTAGGTGCAAAACAGAAC
CGTTTAAGCCACAGTATTAATAACTTGGCGAACGTTCAAGAAAACGTTGATGCATCGAACAGCCGTATTAAAGATACTGA
TTTTGCGAAGGAAACGACGCAAATGACGAAAGCACAGATTTTGCAACAGGCAGGTACTTCTATTCTTGCTCAAGCAAAAC
AATTGCCAAACTCTGCAATGTCACTATTGCAGGGCTAA

Upstream 100 bases:

>100_bases
GCCACCGGCGGTTTTAGCAAGTAATTACGGTCAGTGCTTTTCCATAAGAGAGTAAAGCTGGCCGCTTCGCACAAGCTTGC
GAACTCGAAAGGAGAGCAAA

Downstream 100 bases:

>100_bases
TAGTAATCCTGTGTCTGCTGTGGTTCAGACGTGAGCTTATAGATGCAGGATAACTTGGCAAGCAGCTTTACCGTGAATGA
AGGGCTCTCTCATCTCTCAC

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MAVTVSTNVSAMTAQRYLNKATDELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISIAQTAEG
AMNEATAVLQRMRDLSIQSANGTNSTSERQAIHEEASALQDEINRIAETTSFGGRRLLNGTFGDAAFQIGSNSGEAMIMG
LTSIRADDFRMGGTTFQSENGKNKDWEVSADNAELNIVLPEMGEDEDGNVIDLEINIMAKSGDDIEELATYINGQSDYIN
ASVSEDGKLQIFVAQPNVKGDISISGSLASELGLSDEPIATTVQDLDLRTVQGSQNAISVIDAALKYVDSQRADLGAKQN
RLSHSINNLANVQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQLPNSAMSLLQG

Sequences:

>Translated_385_residues
MAVTVSTNVSAMTAQRYLNKATDELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISIAQTAEG
AMNEATAVLQRMRDLSIQSANGTNSTSERQAIHEEASALQDEINRIAETTSFGGRRLLNGTFGDAAFQIGSNSGEAMIMG
LTSIRADDFRMGGTTFQSENGKNKDWEVSADNAELNIVLPEMGEDEDGNVIDLEINIMAKSGDDIEELATYINGQSDYIN
ASVSEDGKLQIFVAQPNVKGDISISGSLASELGLSDEPIATTVQDLDLRTVQGSQNAISVIDAALKYVDSQRADLGAKQN
RLSHSINNLANVQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQLPNSAMSLLQG
>Mature_384_residues
AVTVSTNVSAMTAQRYLNKATDELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRGLDVAMRNANDGISIAQTAEGA
MNEATAVLQRMRDLSIQSANGTNSTSERQAIHEEASALQDEINRIAETTSFGGRRLLNGTFGDAAFQIGSNSGEAMIMGL
TSIRADDFRMGGTTFQSENGKNKDWEVSADNAELNIVLPEMGEDEDGNVIDLEINIMAKSGDDIEELATYINGQSDYINA
SVSEDGKLQIFVAQPNVKGDISISGSLASELGLSDEPIATTVQDLDLRTVQGSQNAISVIDAALKYVDSQRADLGAKQNR
LSHSINNLANVQENVDASNSRIKDTDFAKETTQMTKAQILQQAGTSILAQAKQLPNSAMSLLQG

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. FlaC is not essential for polar flagellar synthesis and swimming motility. Homopolymer of flaC is not able to form a functional filament [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=173, Percent_Identity=43.9306358381503, Blast_Score=133, Evalue=2e-32,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029
- InterPro:   IPR010810 [H]

Pfam domain/function: PF00700 Flagellin_C; PF07196 Flagellin_IN; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 41115; Mature: 40984

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTVSTNVSAMTAQRYLNKATDELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRG
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHCC
LDVAMRNANDGISIAQTAEGAMNEATAVLQRMRDLSIQSANGTNSTSERQAIHEEASALQ
CEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHH
DEINRIAETTSFGGRRLLNGTFGDAAFQIGSNSGEAMIMGLTSIRADDFRMGGTTFQSEN
HHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCCCEEEEEEHHCCCCCEECCCCEEECCC
GKNKDWEVSADNAELNIVLPEMGEDEDGNVIDLEINIMAKSGDDIEELATYINGQSDYIN
CCCCCCEEECCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCEEE
ASVSEDGKLQIFVAQPNVKGDISISGSLASELGLSDEPIATTVQDLDLRTVQGSQNAISV
EECCCCCEEEEEEECCCCCCEEEECCCHHHHCCCCCCCCHHHHHHCCEEEECCCCHHHHH
IDAALKYVDSQRADLGAKQNRLSHSINNLANVQENVDASNSRIKDTDFAKETTQMTKAQI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LQQAGTSILAQAKQLPNSAMSLLQG
HHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure 
AVTVSTNVSAMTAQRYLNKATDELNTSMERLSSGHKINSAKDDAAGLQISNRLTAQSRG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHCC
LDVAMRNANDGISIAQTAEGAMNEATAVLQRMRDLSIQSANGTNSTSERQAIHEEASALQ
CEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHH
DEINRIAETTSFGGRRLLNGTFGDAAFQIGSNSGEAMIMGLTSIRADDFRMGGTTFQSEN
HHHHHHHHHHCCCCCEEECCCCCCCEEEECCCCCCEEEEEEHHCCCCCEECCCCEEECCC
GKNKDWEVSADNAELNIVLPEMGEDEDGNVIDLEINIMAKSGDDIEELATYINGQSDYIN
CCCCCCEEECCCCEEEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCCEEE
ASVSEDGKLQIFVAQPNVKGDISISGSLASELGLSDEPIATTVQDLDLRTVQGSQNAISV
EECCCCCEEEEEEECCCCCCEEEECCCHHHHCCCCCCCCHHHHHHCCEEEECCCCHHHHH
IDAALKYVDSQRADLGAKQNRLSHSINNLANVQENVDASNSRIKDTDFAKETTQMTKAQI
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LQQAGTSILAQAKQLPNSAMSLLQG
HHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883718; 12620739 [H]