Click here to switch to the map view.

The map label for this gene is hrpA

Identifier: 161486233

GI number:

Start: 1677235

End: 1681080

Strand: Direct

Name: hrpA

Synonym: c1840

Alternate gene names: NA

Gene position: NA

Preceding gene: 26247699

Following gene: 26247702

Centisome position: NA

GC content: NA

Gene sequence:

>3846_bases
ATGCTGCGTGACAGACTGCGTTTTTCTCGCCGTCTGCACGGCGTGAAGAAGGTTAAAAATCCTGATGCACAACAGGCCAT
TTTCCAGGAGATGGCGAAAGAGATTGACCATGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCACGACCGGAGATTACTT
ACCCGGACAATTTGCCGGTTAGTCAGAAAAAGCAGGACATTCTCGAAGCGATTCGTGACCACCAGGTGGTGATCGTCGCC
GGGGAAACGGGTTCCGGTAAAACGACTCAGCTACCGAAAATCTGTATGGAGCTGGGTCGCGGGATTAAAGGGCTGATCGG
CCATACCCAGCCGCGTCGGCTGGCGGCGCGAACGGTGGCGAACCGTATTGCGGAAGAGCTAAAAACGGAGCCGGGCGGTT
GCATCGGTTACAAAGTGCGTTTCAGCGATCACGTCAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTG
GCAGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACCATCATTATTGACGAAGCGCACGAACGCAGCCTGAATAT
CGATTTTCTCCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATTATTATCACCTCCGCGACTATCG
ACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATCGAAGTCTCCGGTCGGACCTATCCGGTGGAAGTGCGC
TATCGCCCGATTGTTGAAGAAGCCGATGACACCGAGCGCGACCAGTTGCAGGCGATTTTTGACGCCGTAGATGAACTGAG
CCAGGAAAGCCCTGGCGACATTCTGATCTTTATGAGCGGCGAGCGAGAAATTCGCGATACCGCCGATGCGCTGAACAAGC
TGAACTTACGCCATACCGAAATCTTGCCGCTTTATGCACGGCTTTCCAACAGCGAACAGAACCGCGTGTTCCAGTCGCAC
AGCGGGCGACGCATTGTACTGGCGACCAACGTCGCGGAAACCTCGCTGACCGTACCGGGTATTAAATACGTTATCGACCC
AGGTACGGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAGCCAATTTCGCAGGCTTCAG
CTAATCAGCGTAAAGGCCGCTGCGGTCGTGTGTCAGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCG
CGCCCGGAGTTTACCGACCCAGAAATTCTGCGTACTAACCTGGCCTCGGTTATTTTGCAGATGACCGCACTGGGCTTGGG
CGATATCGCCGCATTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTCGAAGAACTGG
GTGCGATCACCACGGATGAACAGGCCAGCGCCTATAAACTGACGCCGCTCGGTCGCCAGCTCTCGCAGTTGCCTGTCGAC
CCACGTCTGGCGCGTATGGTGCTGGAAGCGCAAAAACATGGCTGCGTGCGTGAGGCGATGATTATCACGTCCGCGCTCTC
CATTCAGGACCCGCGTGAGCGTCCGATGGATAAACAGCAGGCATCTGACGAAAAACATCGTCGCTTCCACGACAAAGAGT
CTGACTTCCTGGCATTTGTGAATCTGTGGAATTATCTTGGCGAGCAGCAAAAGGCGCTTTCTTCAAACGCCTTCCGTCGC
CTGTGTCGTACTGATTATCTCAACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGCCAGGTGGTGAA
AGAACTTGGCATTCCGGTTAACATCGAACCGGCGGATTATCGCGAAATTCACATTGCGTTGCTGACCGGTTTGCTTTCGC
ATATCGGCATGAAAGATGCCGATAAACAAGAATATACCGGCGCACGTAACGCGCGTTTCTCCATCTTCCCCGGTTCTGGT
TTATTCAAAAAGCCGCCGAAATGGGTAATGGTGGCGGAACTGGTAGAAACCAGCCGCCTGTGGGGACGCATTGCTGCGCG
GATCGACCCGGAATGGGTGGAGCCAGTTGCTCAGCATTTGATTAAACGCACCTACAGCGAACCGCACTGGGAACGGGCGC
AGGGCGCGGTGATGGCAACGGAAAAAGTCACTGTTTATGGTTTGCCGATTGTTGCTGCGCGTAAGGTCAACTACAGCCAG
ATCGATCCGGCGTTATGTCGTGAACTCTTTATTCGCCACGCGCTGGTGGAAGGTGACTGGCAGACGCGTCACGCATTCTT
CCGTGAAAACCTGAAACTACGGGCCGAAGTGGAAGAACTGGAACACAAAACTCGTCGCCGCGATATTCTGGTGGATGACG
AAACGCTGTTTGAGTTCTACGACCAGCGCATCAGCCACGATGTGATTTCCGCACGTCACTTCGACAGCTGGTGGAAAAAA
GTCAGCCGCGAAACGCCTGATTTGCTCAACTTTGAAAAGAGCATGTTGATCAAAGAAGGGGCGGAAAAAATCAGCAAGCT
GGATTACCCGAACTTCTGGCATCAGGGCAATCTCAAGCTGCGTTTGAGCTATCAGTTTGAGCCCGGCGCGGATGCTGACG
GTGTGACCGTGCATATCCCGCTGCCGTTACTTAACCAGGTTGAGGAGAGTGGGTTTGAGTGGCAGATCCCCGGTCTGCGT
CGTGAGCTGATCATCGCCCTGATTAAATCGCTGCCGAAGCCGGTACGCCGTAATTTTGTGCCCGCGCCAAACTACGCCGA
AGCGTTTTTAGGCCGCGTCACACCGCTGGAATTGCCGTTGCTCGACAGCCTTGAACGAGAGTTACGGCGGATGACTGGCG
TCACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATCACTTTCCGCGTGGTGGATGACAAA
AACAAGAAGCTAAAAGAAGGGCGCTCATTACAGGATCTGAAAGACGCCCTGAAAGGCAAAGTGCAGGAAACGCTGTCTGC
CGTGGCGGATGACGGTATCGAGCAGAGCGGTTTACATATCTGGAGTTTTGGTCAACTGCCGGAAAGCTACGAGCAGAAGC
GCGGCAACTACAAAGTGAAGGCTTGGCCGGCGCTGGTGGATGAGCGTGACAGCGTAGCGATCAAACTGTTTGATAACCCG
CTGGAACAGAAGCAGGCAATGTGGAACGGTCTTCGCCGTTTACTGCTGCTAAATATTCCCTCGCCAATCAAATATTTGCA
TGAGAAGTTGCCAAACAAAGCCAAGCTGGGGCTGTACTTTAACCCGTATGGCAAAGTGCTGGAGCTGATCGACGACTGTA
TCTCCTGCGGTGTGGATCAACTGATCGACGCCAATGGTGGCCCGGTCTGGACGGAAGAAGGCTTTGCTGCGCTGCATGAA
AAAGTCCGCGCTGAACTGAACGACACAGTGGTGGATATTGCGAAGCAGGTCGAGCAAATCCTCACTGCGGTGTTCAATAT
CAACAAACGTCTGAAAGGGCGGGTGGATATGACCATGGCGCTGGGGCTTTCTGACATTAAAGCGCAGATGGGCGGGCTGG
TGTATCGCGGTTTTGTCACTGGTAACGGTTTTAAACGGTTGGGCGACACGTTACGGTATTTGCAGGCGATTGAAAAACGA
CTGGAAAAACTGGCGATTGATCCGCATCGTGACCGTGCTCAGATGCTGAAAGTCGAAAACGTCCAGCAGGCATGGCAGCA
ATGGATCAACAAACTGCCGCCTGCACGTCGTGAGGATGAAGACGTGAAAGAGGTCCGCTGGATGATAGAAGAGCTGCGCG
TTAGTTACTTCGCTCAACAACTTGGCACGCCTTATCCGATTTCGGATAAGCGTATTTTGCAGGCGATGGAGCAGATTAGC
GGTTAA

Upstream 100 bases:

>100_bases
TTTAAAAGAAAATTAATCAGGCAGACTACTGCCCACTAACGTTATGACAGAACAACAAAAATTGACCTTTACTGCCTTGC
AGCAGCGGCTGGATTCGCTG

Downstream 100 bases:

>100_bases
CACTGCTATTTGCCTGATAAATCTAAAACCCGGTAAGCATTTAGCGCCGGGTTTTTTATTAATTCTAAAAACGATAAGGG
AAAAAATTCAGGAGTTCAGA

Product: ATP-dependent RNA helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1281_residues
MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDHAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA
GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL
AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR
YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH
SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS
RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVD
PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR
LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNIEPADYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG
LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ
IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKTRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKK
VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLR
RELIIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK
NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP
LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHE
KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR
LEKLAIDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEVRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS
G

Sequences:
NA

Specific function: NA

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA