Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 24375456

GI number:

Start: 4108149

End: 4108835

Strand: Reverse

Name: Not Available

Synonym: SO_3969

Alternate gene names: NA

Gene position: NA

Preceding gene: 24375460

Following gene: 24375454

Centisome position: NA

GC content: NA

Gene sequence:

>687_bases
ATGATGAAGCCTTCAATTAAATCATTGCCAGCATCTAAGCTTGCGATAGTCGTGATCACCAGCGCCTTGATTGCGTCTGG
TTGTACAACCGTCAACCCCTATACCAATGAACAACAAACTGCGAAAGCGACCACGGGTGCACTCATTGGTGCCGTTGCTG
GGGCTGCCGTTGGTGTGGCGTCGTCAAGTAAGAGTGACCGCGGTAAAGGGGCCTTAATTGGTGCGGCCTCTGGGGCCGCC
TTGGGTGGCGGCATTGGTTACTATATGGATGTTCAAGAAACCAAATTACGCCAACAACTGGCATCAACAGGCGTAAGCGT
GACTCGCAGCGGTGACAATATTATTCTCAACATGCCAAATGAAGTGACTTTTGGTGTGGATCAAACTGAGCTAAGCGATG
GTGCTAAGCGGGTACTTAACTCTGTTGCGCTGGTGGCGAAGGAATACAGCAAGACCCAACTGAATGTATTAGGTTACACC
GATAGCAGCGGATCTGATTCTTACAACTTACGTTTGTCGCAGGTTCGCGCCAGTGAAGTAGGCAACTACTTGATGAGTAA
AGGCGTGGCTTCCGCTCGCGTTAAGTCTAAAGGCATGGGGGAGGCGAGTCCTATCGCATCCAATGCCAATGCCGAAGGGC
GCGCCCAAAACCGTCGTGTGGAAATAGTCTTAACTCCAACGGGTTAG

Upstream 100 bases:

>100_bases
TATATACTGCGATTTTTTTCATGGTGTCTTCTGGCGACTTACCACGCCCTTTGCCTTTTCGTAGGTAAATAGCATCATCA
ATCATGTTATGAGGTCATAA

Downstream 100 bases:

>100_bases
TAATAATTCATCACGGTAAAAGTCGCCTGCGGGCGACTTTTTGCTTTATCGTAAGGGACAAATTGTCCTTCTGTTGTTAT
ATCTTCAGTGATCTTGTCCG

Product: OmpA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>228_residues
MMKPSIKSLPASKLAIVVITSALIASGCTTVNPYTNEQQTAKATTGALIGAVAGAAVGVASSSKSDRGKGALIGAASGAA
LGGGIGYYMDVQETKLRQQLASTGVSVTRSGDNIILNMPNEVTFGVDQTELSDGAKRVLNSVALVAKEYSKTQLNVLGYT
DSSGSDSYNLRLSQVRASEVGNYLMSKGVASARVKSKGMGEASPIASNANAEGRAQNRRVEIVLTPTG

Sequences:
NA

Specific function: NA

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA