Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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The map label for this gene is degS

Identifier: 24375431

GI number:

Start: 4088588

End: 4089670

Strand: Direct

Name: degS

Synonym: SO_3943

Alternate gene names: NA

Gene position: NA

Preceding gene: 24375430

Following gene: 24375443

Centisome position: NA

GC content: NA

Gene sequence:

>1083_bases
ATGACAATAAAAGACACCCTGTTATATCTCGGTAAAGCCGTGCTTTTCGGCCTTATTATGGCAGCCATGTTTTTGTTAGT
AACTCATTACTTCGACAATAAGAGTCTTGGCAACTCATTACTACAAAACCGCGGTAACAACACGGTTGAACTCTCCTTTG
CCAAGGCCGTGCGTCGCGCAGCCCCTGCCGTCGTCAATATTTACAGCTTGAGTATCGATCAGAGCCGTCCATTGAATTCT
GGCTCACTCCAAGGTCTAGGATCTGGGGTGATCATGAGTAAAGAAGGTTATATTCTCACTAATTATCATGTGATTAAAAA
AGCCGATGAGATCGTCGTCGCGCTGCAAGATGGCCGCAAGTTCACCTCTGAAGTGGTGGGGTTTGATCCCGAAACCGATC
TTTCAGTGCTTAAGATCGAAGGCGATAATCTCCCCACTGTGCCAGTCAATCTCGACAGCCCCCCCCAGGTTGGCGATGTG
GTATTAGCCATTGGTAACCCCTATAACCTTGGCCAAACGATTACCCAAGGCATTATCAGCGCCACAGGCCGTAACGGCTT
AAGTTCGGGTTATTTAGACTTTTTACAGACCGATGCAGCAATTAACGCCGGTAACTCCGGAGGTGCATTAATTGACACTA
ATGGTAGCCTGATTGGCATCAACACCGCTGCGTTTCAAGTGGGCGGTGAAGGTGGTGGCCACGGCATTAACTTCGCGATC
CCGATTAAACTCGCCCACAGCATTATGGGCAAACTGATCAAAAATGGCCGTGTGATCCGTGGCGCCTTAGGGATTTCGGG
CGAACCGATTAACCCTGTTGTGGCGCAAATCCTTAACCTCCCCGATTTGCGTGGCGTATTAGTCACTGGCATCGACCCTA
ATGGTCCTGCGGCACGTGCGCAGCTACTACCAAGGGATGTGATCATTAAATATGATGGTGAAGATGTGCCAGGGGTTGAA
ATGCTGATGGATCGAATTGCCGAAACAACGCCCGGCAAGAAAGTCATGATGACAGTGATCCGCCAAGGCAAACAGCAAGA
ATTACCTGTAATCATCGATGAAAAAGTGGTTGTTAGTAATTAA

Upstream 100 bases:

>100_bases
CAATTATCAGACGCTAATCAGCATAGGGAACACGCGTTCCCTATGCTTTAACTTGTTAAACATGTTAATCTAACTCACCT
TTTTCAATATTTAGCCTGCC

Downstream 100 bases:

>100_bases
TTGAATGACCATGTTTAGATAAATGCCAAATGAGGCCGGAATAAAGCCTCATTTGGTGTAATTACAATCTAAATCGCGTA
TTGAGGGCGTTCAAAATTCT

Product: protease DegS

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>360_residues
MTIKDTLLYLGKAVLFGLIMAAMFLLVTHYFDNKSLGNSLLQNRGNNTVELSFAKAVRRAAPAVVNIYSLSIDQSRPLNS
GSLQGLGSGVIMSKEGYILTNYHVIKKADEIVVALQDGRKFTSEVVGFDPETDLSVLKIEGDNLPTVPVNLDSPPQVGDV
VLAIGNPYNLGQTITQGIISATGRNGLSSGYLDFLQTDAAINAGNSGGALIDTNGSLIGINTAAFQVGGEGGGHGINFAI
PIKLAHSIMGKLIKNGRVIRGALGISGEPINPVVAQILNLPDLRGVLVTGIDPNGPAARAQLLPRDVIIKYDGEDVPGVE
MLMDRIAETTPGKKVMMTVIRQGKQQELPVIIDEKVVVSN

Sequences:
NA

Specific function: NA

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA