Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24375348

GI number:

Start: 4004991

End: 4006886

Strand: Direct

Name: Not Available

Synonym: SO_3859

Alternate gene names: NA

Gene position: NA

Preceding gene: 24375344

Following gene: 24375350

Centisome position: NA

GC content: NA

Gene sequence:

>1896_bases
TTGCTATCTTACCCACGCTATTTAGCCGTATTCCTTCTCATCATAGGGCAATCATGTCTTGCTTTTGCTGAAGAGCAGCC
ACAGGTCGGTCAGCTATTCAAACTATTTGATAGCGGTGAGTCTATGCCGCGTGCAACCATCGAGCAAAATATTGCGCTCT
TGGAAAAGCTCATCTCAAGTGATGATATCGAGCGTATTGAAAAACTAAACCAAATCAAGTGCTGGAACCAAGCTTCAGAT
ACTGAAGAGGAAATCGCTAAAGCACTCAATTATGCCGAGCAAGCACTCTCGCAGATCCCATCAACGGCTTCGACTCATTT
TATTACCGATATCAATCTTTGCCGAGCTTGGTTTTTACAACTGACAGGCGATATTAACGGCGCAATGGAGGGCTATACCA
AAAGCGTTCAAAGCGCCTATGAACATGAGGATATAAAACTCATTGCCGATGCCCGCAGTCTTCGTGGTGCCTTGTATTCC
TACACAGGAGACTTTTCAGAGGCATTGGATGATTTGGTGACCGCACAAGGACTTTATGAATCGTTAAATCTCACGGGTTG
GGCGAATATAAACTTGACCGATATCGCCACCAGCTTTAGACGTTATGGCGACCCTGAAAGTGCAATAAAATACTACAAAA
AACTCAAAGAGTTATATTTGAAAAATGGCAATAAAGAGCAAGTTGCGAATGTAATGTCAGAAATCGGAATCGCCCTGGAT
GAAATGGGTAAACATGAGCAAGCCATTGAACACTTTCGCTTTAGTTACCAGTATTTTAAAGACCAGAAGCTCAACATTGT
TGCCGCGATCAACGCGACCAATATCGCCTATAGCCTTATTCAGTTAAACCGCTTAGATGAAGCTGAAAACTACTTAAATG
AAGCGGCACCCGACATCAGCGAAAATGAACCTGCTGCATATAGTTTTATGAAGCTGTTTATGGGGAAAATACGCAACCAA
CAAGGTCGTTACCAAGAAGCCCTAGATGAACTTAGCGCCGCTGAACATGCATTTCGCGTGATGCATAATGACCGAGGCCT
AATCCAACTATTACAACTCAAAAGTGATATCTATGCCGCTATGGAGGACTTACCACAGGCCTACCATATTCTTCAGGAAT
TTATTGCACTCACAAAAAAAGTAGATGACAGCTCAATTGCACATCAAACAACTGAGCTAAAAGTAAAGTTCGACACGAGC
TGGATCGAATCAGAAAACAAACGATTGATCGATAATCAAAAGTTGAAGGAACAAGAATTAACCCTGCTCGAAAAAAATAA
GTCGCTACAGCTCATCATTCTGTTACTCACAGGCTGTATTTTGGCCACTGTGTCACTGTTTGCTTATAAACAAGTACACA
GAAACCGTCAGCTGCAAACCATTGCATTAACCGATTATCTCACCCAATTACCCAATCGCAGGCATATTTATGCCCAAGCA
GAGCAGTATTTTCAGCTAGCACTTAAACAACAAATTCCTTTTTCGATCATTATCTTCGATGCGGATCATTTTAAAAAAAT
CAACGACAACTTCGGCCATGAAATTGGCGATCAAGCTCTTTTGACTATTGCCGAAGCGAGCAAAACATTAACAACGGATC
GAAATCTGGTTGGCAGAATAGGGGGTGAAGAATTTTTGATTTTATTACCTAATACGGATGCCGATCGTGCATGGAAACTT
GCCCATGAGTTACAAACTTTAATCACACGATTTGGGGCAATTAATTTACCAGTAGAGCTAAAACTGACCGTCAGTGCAGG
GGTGGCGACCTTGCCCATCCAATCAGAATTACAAGATCAAAACTTTGCGCGTTTACTAAAACGGGCTGATAACGCACTAT
ATGAAGCCAAAAATGCCGGAAGAAATTGCGTTAAAGCAGCTGAAATCACGGGATAA

Upstream 100 bases:

>100_bases
GACACAGAATTATGAACACTACCCAATGAAAACAATAGATGAAAAACTTATGCTAAGATAATGATTAGCTATCTGTTTCA
ATGCGAACAGGAAACCTCTC

Downstream 100 bases:

>100_bases
CTTAATCAGTCTTATGCCAAAAAATCTGATTTTCAAGGGGCGGGGGTAAAGTACCAAACCATTTTTGATAAAGCCTTGCA
AACTCGCCTGACTCTTTTCG

Product: cyclic nucleotide phosphodiesterase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>631_residues
MLSYPRYLAVFLLIIGQSCLAFAEEQPQVGQLFKLFDSGESMPRATIEQNIALLEKLISSDDIERIEKLNQIKCWNQASD
TEEEIAKALNYAEQALSQIPSTASTHFITDINLCRAWFLQLTGDINGAMEGYTKSVQSAYEHEDIKLIADARSLRGALYS
YTGDFSEALDDLVTAQGLYESLNLTGWANINLTDIATSFRRYGDPESAIKYYKKLKELYLKNGNKEQVANVMSEIGIALD
EMGKHEQAIEHFRFSYQYFKDQKLNIVAAINATNIAYSLIQLNRLDEAENYLNEAAPDISENEPAAYSFMKLFMGKIRNQ
QGRYQEALDELSAAEHAFRVMHNDRGLIQLLQLKSDIYAAMEDLPQAYHILQEFIALTKKVDDSSIAHQTTELKVKFDTS
WIESENKRLIDNQKLKEQELTLLEKNKSLQLIILLLTGCILATVSLFAYKQVHRNRQLQTIALTDYLTQLPNRRHIYAQA
EQYFQLALKQQIPFSIIIFDADHFKKINDNFGHEIGDQALLTIAEASKTLTTDRNLVGRIGGEEFLILLPNTDADRAWKL
AHELQTLITRFGAINLPVELKLTVSAGVATLPIQSELQDQNFARLLKRADNALYEAKNAGRNCVKAAEITG

Sequences:
NA

Specific function: NA

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA