| Definition | Shewanella oneidensis MR-1, complete genome. |
|---|---|
| Accession | NC_004347 |
| Length | 4,969,803 |
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Identifier: 24374990
GI number:
Start: 3631033
End: 3634173
Strand: Direct
Name: Not Available
Synonym: SO_3484
Alternate gene names: NA
Gene position: NA
Preceding gene: 24374989
Following gene: 24374994
Centisome position: NA
GC content: NA
Gene sequence:
>3141_bases ATGTGGCTGTCCGATGTCTCAGTTAAACGCCCCGTCGTTGCGATCGTTTTAAGCTTATTGCTGTGCGTCTTTGGCTTAGT GTCCTTCACTAAACTTTCAGTACGGGAAATGCCTGATGTTGAAAGCCCTGTGGTGACTGTCAGCACCAGTTATTCCGGTG CGTCGGCTGCCATTATGGAAAGCCAAATCACTAAGACCCTCGAAGATGAACTTACGGGGATCAGCGGTATCGATGAAATC ACCTCCACTACCCGCAATGGTAGCTCACGGATCACGGTCAAATTCCTCCTCGGTTGGAACTTAACCGAAGGGGTGAGTGA TGTGCGTGACGCAGTAGCTCGTGCCCAGCGCCGCCTACCTGAAGACGCTAACGATCCAGTGGTCTCCAAGGACAATGGTT CCGGCGAGCCGTCAGTGTATGTGAACCTAAGTTCAAGCGTGATGGACAGAACCCAACTGACCGATTATGCCCAGCGGGTA TTAGAAGATAGATTCAGTCTGATCAGTGGTGTGAGCTCGATTAGCATCTCTGGCGGTCTATACAAAGTCATGTATGTCAA ACTCAGGCCCGAGCAAATGGCGGGGCGCAACGTCACCGTCACCGATATTACCAGCGCCCTGCGCAAAGAGAATATCGAAA CCCCAGGCGGCCAGGTACGTAACGATACCACAGTGATGTCGGTGCGCACCAAAAGGCTCTATTACACCCCAAAGGATTTT GATTATTTAGTCGTTCGTACTGCCAGCGACGGTACGCCTATCTATTTGAAAGATGTGGCCGATGTGGCCGTAGGCGCACA GAACGAAAACTCCACCTTTAAGAGCGATGGTATTGTTAACCTAAGTCTAGGGGTGATCACTCAATCCGATGCTAACCCCT TAGTCGTTGCACAGGAAGTACATAAAGAAGTCGATAAAATTCAAGACTTTTTACCCGAAGGCACCAGCCTTGTGGTCGAC TTTGACTCCACCGTCTTTATTGACCGCTCGATCAATGAGGTTTACAACACCCTCTATGTCACTGGCGCGCTCGTGGTGTT AGTGCTGTATATTTTTATCGGTCAAGTAAGGGCAACGCTTATCCCTGCGGTGACAGTCCCGGTGTCTCTGATCTCGGCCT TTATCGCCGCCAATATGTTTGGCTACTCGATTAACCTATTAACCTTAATGGCATTAATCCTTGCCATTGGTCTAGTGGTC GATGATGCCATTGTGGTGGTCGAAAACATTTTCCACCATATCGAAAAAGGTGAAGAGCCGCTGCTTGCGGCTTACAAAGG CACACGGGAAGTCGGTTTTGCGGTCGTGGCAACCACCGCAGTGTTAGTCATGGTGTTCCTGCCTATTTCCTTTATGGAGG GTATGGTCGGTTTACTCTTTACCGAGTTTTCCGTGATGCTAGCTGTATCGGTACTGTTCTCTTCCCTCATTGCCCTCACA CTAACACCTGTACTGAGCAGCAAACTGCTAAAAGCCAATGTTAAACCAAACCGTTTCAATCGCTTTGTCGATCGTGGTTT TGCTCGAATGGAAAAGCTTTACCATGTCGGTGTGACCCATGCGATCCGCTTTAGATTACTGGCGCCACTGGTTATTCTTG CCTGTATTGGCGGTAGCGTATGGTTAATGCAGCAAGTCCCCGCGCAATTAGCGCCGCAGGAAGACCGCGGTGTACTCTAT GCCTTTGTGAAAGGCGCCGAGGGCACTAGCTATAACCGTATGACGGCGAACATGGATATCGTCGAAGACAGATTAATGCC ACTCCTTGGCCAAGGTGTATTGCGGTCTTTCAGTGTGCAAGCCCCTGCCTTTGGTGGTCGTGCTGGCGATCAAACCGGCT ATGTAATTATGCAGCTAGAGGATTGGGAACATCGCAATGTCACGGCGCAACAGGCGTTAGGTATTATTAGCAAGGCATTG AAAGATATTCCCGATGTAATGGTTCGTCCTATGATGCCAGGCTTTAGGGGCCAATCGAGTGAGCCAGTACAATTTGTACT GGGTGGCTCTGATTATGCCGAACTCTTTAAATGGGCACAGGTGTTAAAAGAGCAAGCCAATGCCAGCCCGATGATGGAAG GCGCCGATCTGGATTACGCCGAAACCACACCGGAACTGATTGTCACCGTTGATAAAGAGCGTGCCGCAGAACTAGGGATC AGCGTCGATGACGTCTCCCAAACCTTAGAAGTCATGCTCGGCGGGCGCAAAGAAACCACCTATGTGGATCGCGGCGAAGA GTACGATGTGTATCTGCGCGGTGATGAAAACAGCTTTAACAACGTTGGAGATTTAAGCCAAATCTATATGCGTTCGGCCA AGGGCGAATTAGTCACGCTCGATACGGTCACCCATATCGAAGAAGTGGCCTCGGCGCAAAGATTGAGCCACACCAATAAA CAAAAATCCATCACCCTTAAGGCTAACATCAGTAAAGGTTACACCTTAGGCGAGGCCTTAACGTTCTTGGAAAACAAGTC CATAGAGTTGTTACCCAAGGATATTTCCATCGGCTATACCGGTGAATCTAAGGACTTTAAAGAAAACCAAAGCAGCATTT TTATTGTGTTCGGTTTAGCGCTACTGGTAGCTTACTTAGTACTCGCTGCGCAATTTGAAAGCTTTATCAACCCCTTAGTG GTGATGTTTACTGTGCCAATGGGGGTATTTGGTGGTTTCCTCGGCCTGTTGGTAACCAGTCAAGGTATTAACATCTATAG TCAGATCGGCATGATCATGTTGATTGGCATGGTGACCAAAAATGGGATCTTAATCGTCGAGTTTGCCAACCAATTGCGTG ACCGAGGTTTGGCCCTAGACAAAGCCATTATCGACGCCTCGACCCGCCGCTTACGCCCGATTTTGATGACGGCCTTCACC ACTTTAGTCGGCGCGATACCGCTGATTTTCTCAACGGGCGCAGGCTCTGAAAGCCGGATTGCCGTGGGGACTGTGGTGTT TTTCGGCATGGCCTTTGCGACCTTTGTAACCCTGTTCGTCATCCCGGCAATGTACCGTTTAATCTCGGCCGCCACCCATT CACCGGGTTATGTTGAAGCGAAACTCGAAGCGGCCATAAAAGCTCAAGAGCTCGCAGCACAAGAGGCAGCCAAACAGCAG GAGCAAACGGCAAAAGCTTGA
Upstream 100 bases:
>100_bases ATATGCGCGATGGCTTAAAAATAAATGAAGTCGCTCTTGAAGCTAAAAATAGTAATAACCGCCCAGCCAAGTCAGACGTC AACACTGCGGAGACGAAATA
Downstream 100 bases:
>100_bases TAACAAAGCGGTGATGGAAAACCAAGAGACGTAAATCATCAGCGCGGATCATAAAAAGCCAAGGTACAAATACCTTGGCT TTTTATTTATGTCGGAGTGG
Product: AcrB/AcrD/AcrF family protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1046_residues MWLSDVSVKRPVVAIVLSLLLCVFGLVSFTKLSVREMPDVESPVVTVSTSYSGASAAIMESQITKTLEDELTGISGIDEI TSTTRNGSSRITVKFLLGWNLTEGVSDVRDAVARAQRRLPEDANDPVVSKDNGSGEPSVYVNLSSSVMDRTQLTDYAQRV LEDRFSLISGVSSISISGGLYKVMYVKLRPEQMAGRNVTVTDITSALRKENIETPGGQVRNDTTVMSVRTKRLYYTPKDF DYLVVRTASDGTPIYLKDVADVAVGAQNENSTFKSDGIVNLSLGVITQSDANPLVVAQEVHKEVDKIQDFLPEGTSLVVD FDSTVFIDRSINEVYNTLYVTGALVVLVLYIFIGQVRATLIPAVTVPVSLISAFIAANMFGYSINLLTLMALILAIGLVV DDAIVVVENIFHHIEKGEEPLLAAYKGTREVGFAVVATTAVLVMVFLPISFMEGMVGLLFTEFSVMLAVSVLFSSLIALT LTPVLSSKLLKANVKPNRFNRFVDRGFARMEKLYHVGVTHAIRFRLLAPLVILACIGGSVWLMQQVPAQLAPQEDRGVLY AFVKGAEGTSYNRMTANMDIVEDRLMPLLGQGVLRSFSVQAPAFGGRAGDQTGYVIMQLEDWEHRNVTAQQALGIISKAL KDIPDVMVRPMMPGFRGQSSEPVQFVLGGSDYAELFKWAQVLKEQANASPMMEGADLDYAETTPELIVTVDKERAAELGI SVDDVSQTLEVMLGGRKETTYVDRGEEYDVYLRGDENSFNNVGDLSQIYMRSAKGELVTLDTVTHIEEVASAQRLSHTNK QKSITLKANISKGYTLGEALTFLENKSIELLPKDISIGYTGESKDFKENQSSIFIVFGLALLVAYLVLAAQFESFINPLV VMFTVPMGVFGGFLGLLVTSQGINIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGLALDKAIIDASTRRLRPILMTAFT TLVGAIPLIFSTGAGSESRIAVGTVVFFGMAFATFVTLFVIPAMYRLISAATHSPGYVEAKLEAAIKAQELAAQEAAKQQ EQTAKA
Sequences:
NA
Specific function: NA
COG id: COG0841
COG function: function code V; Cation/multidrug efflux pump
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA